Lepisosteus oculatus (spotted gar): 102696700
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Entry
102696700 CDS
T07349
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03020
RNA polymerase
loc04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102696700 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
102696700 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
loc03021
]
102696700 (polr3a)
Enzymes [BR:
loc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102696700 (polr3a)
Transcription machinery [BR:
loc03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
102696700 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF3654
Motif
Other DBs
NCBI-GeneID:
102696700
NCBI-ProteinID:
XP_006630330
Ensembl:
ENSLOCG00000004942
LinkDB
All DBs
Position
LG5:6964686..6990650
Genome browser
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEEMRQQAHIQVVSKNLYSQDTSHTPLLYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYIDLELPCFHIGYFKAIIGVLQMICKTCSHIMLSKE
ERKQFLDVLKRPGLPYLQKRGLKKKISEKCRKRSVCLNCSAFNGPVKKCGLLKIIHEKYK
TTKKVVDPVVSEFLQSFDIAIEHNKEVEALLARAQENLNPLVVLNLLKRIPSEDVPLLLM
NPEAGKPADMILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMSG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPEKVNKANIDMLRKLVRNGPDVHPGANF
IQQRHTNMKRFLKYGNREKIAQELKYGDTVERHMIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRSKACQIVASVLVGKDEKIKVCLPPPAILKPITLWTGKQI
FSLILKPGKSCPVKANLRTKGKQYCGRGEDLCPNDSFVVIQNSELMCGSMDKGTLGSGSK
NNIFYILLRDWGQMEAANAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKHELLEAG
YKKCDEYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYNCPDQPALSKNELVLTAESIMKRSDFAC
CQDSYLEEIKKFIKNMSEKIKKTRDKYGINDNGTTEPKVLYQLDRITPTQLEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNI
STPIITAHLDIDDDADFARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICMSKLRVKPGDIAVHGEAVVCVSPRENSKSSMYYVLQSLKEELPKIV
VQGIPEVSRAVIHIDEQSGKEKYKLLVEGDNLRAVMATHGVKGTRTTSNNTYEVEKTLGI
EAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKAEKDSSPPRRPLLFD
NSEFHIPIIT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagtttagggaaacagatgtggctaaaaaaataagccacatctgtttc
gggatgaagtccgcagaggagatgcggcagcaggcgcacatccaggtggtcagtaagaac
ctgtacagccaggacaccagccacacgccgctgctgtacggtgtgctggatcaccgcatg
ggcacgagtgaaaaagatcggccttgtgaaacctgtgggaagaatcttgctgactgctta
ggacattatggatacattgacctcgagctgccctgcttccatattggatattttaaagca
attattggggtccttcagatgatctgcaaaacatgttcccatatcatgctttctaaagag
gaacggaagcagtttctggacgtcctgaaaagacctggtctgccctacctacagaaaaga
ggactaaaaaagaagatttcagagaaatgccgcaaaagatcagtctgtttgaactgttca
gcttttaatgggccagtaaaaaagtgtggcttgctgaagattatccatgaaaagtacaag
actactaagaaagtggtggatccagtcgtctcggaatttctccagtcatttgacattgca
atagaacataataaagaagtagaggctctgctggctagggcccaggaaaacctgaatcct
ctggtggtgctaaaccttttaaagagaatcccctcggaagacgtccctctgctgctgatg
aacccggaggccgggaagcctgcggacatgatcctgacccgcctgcttgtcccgcctctg
tgcatcaggccctcagtcgtcagcgacctgaagtcgggcaccaacgaggacgacctgacc
atgaagctgacggagataatttttctcaacgacgtcattaaaaagcatcgcatgtcagga
gcgaagactcagatgatcatggaggactgggacttcctgcagctgcagtgtgctctgtac
atcaacagcgagctgtcgggcatcccgctcaacatggcgcccaaaaaatggactagaggc
tttgtgcagaggctcaagggaaagcaagggcgatttagaggaaatttgtctggtaagaga
gtggatttctctggacgaacggtcatttctcccgatccaaatcttcgtattgacgaagtt
gctgtgcctgttcatgttgccaagatactcacttacccagagaaggtgaacaaagccaac
attgacatgctgagaaaacttgttcgaaatgggcctgatgttcatccaggagctaacttt
attcaacagcgccacaccaacatgaaaaggtttctgaagtatggtaaccgtgagaagata
gcccaggagctcaagtatggagacactgtggagcgacacatgatagacggagacattgtg
ctattcaacaggcagccttccctgcacaagctcagcatcatggcccatattgcaagagtg
aagcctcacagaacgttccggtttaacgagtgtgtgtgcacgccgtacaacgccgacttt
gatggagatgagatgaatcttcatcttcctcagactgaggaagccaaggcagaagctctt
gtcctcatggggacaaaagccaaccttgtgactccaagaaatggagaacctctcattgct
gctatccaggactttctgacaggcgcttacctcctcaccctgaaagacactttctttgat
agatcaaaagcctgccagatagttgcttctgtccttgttgggaaggatgaaaagataaag
gtttgcctacccccccctgcaatcttaaagcccataactctctggactgggaagcagatc
ttcagccttattctgaagcctgggaagagctgtcctgtgaaggctaatctgcggaccaag
ggcaagcaatactgtggccgaggggaggatctctgtcccaatgactcctttgtggtgatt
cagaacagcgagctgatgtgtggcagcatggacaagggcactctgggctcgggatcgaag
aacaatatcttttacatccttctgagggactggggacagatggaagcagccaacgccatg
tcccggctggccagactcgctcctgtctatctgtcaaaccgtgggttctctattggtatt
ggcgatgtgacccctggccagggccttctcaaagctaagcacgaactcctggaagcgggt
tacaagaagtgcgatgagtacatcgaagctctcaacacgggcaagctgcagcagcagcct
ggctgcacagccgaggagacgctggaggcccttatcctgaaggagctgtcagtgatcaga
gaccacgctggcagtgcctgcctgagggaactggacaaaagcaacagccctcttattatg
gctctgtgtggatcaaaagggtctttcatcaacatctcccagatgattgcctgtgtgggg
cagcaggccatcagtgggtcccgggtcccagatggatttgagaacaggtccctgcctcac
tttgaaaagcactctaaactcccggctgcgaagggttttgtggccgacagtttctactcg
ggcctgacgccgaccgagttcttcttccacaccatggctggccgcgagggcctggtggac
accgctgtcaagactgccgagaccgggtacatgcagaggcgtctagtgaaatcgctggag
gatctctgttctcagtatgacctcaccgtgcggagctccacaggcgacatcattcagttt
atttacgggggtgacggactggatccggctgcaatggagggcaaagacgagcctttggag
ttcaagagggtgctggataacatcagagctgtatataactgtccagatcaaccagccctc
agcaagaatgaactggttttaactgcagagtctattatgaagaggagtgattttgcatgc
tgtcaggacagctacctggaggaaatcaaaaagttcatcaagaacatgtcagaaaaaatc
aagaaaaccagggacaagtatggcatcaacgacaacggtacaacggagccaaaagttctg
taccagctagaccggatcacaccaacccaactggagaagttcttggagacatgcagagac
aagtacatgagggcccagatggagccaggatcagcagtgggagcactgtgtgcccagagc
atcggagagcccggcacgcagatgaccctgaagaccttccacttcgccggggttgcctcc
atgaacatcactctgggggttccccggatcaaggagatcatcaacgcctccaaaaacatc
agtacccccattataacggcgcacttggacattgatgacgatgctgactttgcacgcctc
gtgaagggaaggattgagaaaacccttcttggagagatttcagaatacattgaagaagtc
tttcttcctgatgactgctttattcttgttaagctctctctggaaagaatcaggcttctt
agattagaggtcaatgctgaaaccgtgagatactctatctgcatgtccaagctgagagtg
aagcctggagacattgctgtccatggagaggctgttgtctgtgtgtcacctagggaaaac
agcaagagctccatgtattatgttttgcagtccttgaaagaagagttaccaaagattgtg
gtccagggtattcctgaggtctccagggcagtcattcatattgacgagcagagtgggaag
gagaagtacaagcttctggtggaaggtgacaacctgcgtgctgtcatggcaacacatggc
gttaaagggactagaacaacttctaacaacacctatgaggttgagaaaacattgggcatt
gaagcagcaaggtcaacaatcatcaatgagattcagtacaccatggtgaaccatgggatg
agcatcgacaggagacatgtgatgctgcttgcagacctcatgtcttacaagggtgaaatc
ttaggaatcacgcgctttggtctggccaaaatgaaggagagtgttttgatgttggcatcc
tttgaaaagactgcagatcacctttttgatgctgcatactttggacaaaaggactccgta
tgtggtgtatcagaatgtattatcatgggaatcccaatgaacattggaacaggacttttc
aaacttctgcacaaagctgagaaggactcaagtccacctaggagacccctgcttttcgat
aacagtgaattccacattcccatcataacgtag
DBGET
integrated database retrieval system
