Lysinibacillus pakistanensis: GDS87_07880
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Entry
GDS87_07880 CDS
T06280
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K18104
ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:
7.6.2.2
]
Organism
lpak
Lysinibacillus pakistanensis
Pathway
lpak01501
beta-Lactam resistance
lpak02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GDS87_07880
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GDS87_07880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpak02000
]
GDS87_07880
01504 Antimicrobial resistance genes [BR:
lpak01504
]
GDS87_07880
Enzymes [BR:
lpak01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
GDS87_07880
Transporters [BR:
lpak02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
GDS87_07880
Antimicrobial resistance genes [BR:
lpak01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AbcA [MD:
M00700
]
GDS87_07880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
MFS_1
ABC_membrane_3
AAA_22
AAA_23
AAA_30
AAA_21
SRP54
AAA_29
AAA_28
Motif
Other DBs
NCBI-ProteinID:
QGG50882
LinkDB
All DBs
Position
complement(1696981..1698735)
Genome browser
AA seq
584 aa
AA seq
DB search
MQETLKDTTKKQDWRRFIQLVKRAEPPVWLLVIALIMSLATTGVGFIVPLFTKQLVDGFS
LEALNYWQIILLGIAFIAQAIASGLSIYYLNRVGQHVVAKLRDQLWRKLLHLPIPYYDEH
DTGETLSRVTNDTAVVKELITEHLANCLSGVISIIGSITILLFLDWKMTLVMLIAVPLAM
VILMLLGKRMFVISKGMQDETAKFTSVLNQVLPETRLVKASNAEQIEYERGKNGITNLFT
FGLKEAKIHALISPLISFVLMSVLVAIIGYGGVRVSSGELTAGDMVAFILYLIQIIMPMT
QLTMFFTQLQKAMGATERISELLEHEEEHIEDGLTVEKVDQPIYVKNVDFSYDEEPILSN
INFTIEPGKVTAIVGPSGGGKTTTFSLLERYYQPTSGSITLGDTPIETFSLHSWRSQIGY
VAQESALLSGTIRDNICYGVDREVQDDELEKVAKMAYADHFINDLPDKFNTEVGERGIKL
SGGQRQRISIARALLRNPQILMLDEATSSLDSKSEIYVQKALDNLMQGRTTLVIAHRLST
VVDADQILFIEKGYITGCGTHETLFESHAMYREFAKQQLRIKEE
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
ttgcaagaaacattaaaagatactactaaaaaacaagattggcgacgttttatacaatta
gtaaaacgagctgaaccacctgtttggctactagttattgccttaattatgagtttagct
acaacgggtgtaggctttatcgtccccttatttacaaaacagttagtggatggcttttca
ttagaagcgcttaattattggcaaatcattttactgggtattgcctttatcgcacaggct
attgctagtggattatcgatctattatttaaatcgagttggacagcatgttgtggcaaaa
ttacgagatcaactttggcgcaagctgcttcatttaccaatcccctattatgatgaacac
gatactggtgaaacattaagccgtgttaccaatgacacagcggtcgtgaaggagcttatt
acagagcatctagcaaactgcttatctggtgttatttccatcatcggctctatcaccatt
ctcttattcttagattggaaaatgacgctggtaatgctaattgctgttccactggcgatg
gttattttaatgttgcttggtaaacgcatgtttgtgatttcaaaaggtatgcaagatgag
acagcgaagtttacatccgtgctgaaccaagttttacctgaaacacgcttagttaaggca
tcaaatgcggagcaaattgaatatgagcgtggaaaaaatggcattacgaatctctttacc
tttggcttaaaagaagcaaaaattcatgcgcttatttcgccattaatttcatttgttctg
atgtcagtacttgtcgctattattggatacggtggtgttcgtgtatcctctggggaacta
actgctggcgatatggtggcatttattttatatttaatccaaatcattatgcctatgacc
caattaactatgttctttacgcaacttcaaaaggctatgggagctacggaacgaattagc
gagttacttgaacatgaagaagaacatattgaagacggcttaacagtagaaaaagtagat
caaccgatttatgtcaaaaatgtcgacttctcttatgatgaggaaccaattttgtccaat
attaactttaccattgagccaggcaaagtaacggccatcgttggaccaagtggtggcgga
aaaacaacaacattttctctcttagagcgatattatcagccaactagtggcagtattaca
ctaggagatacaccaattgaaactttctcactccactcttggcgcagtcaaattggctat
gtggcgcaggaaagtgctctactgtcaggaacgattcgtgacaatatttgctacggtgtt
gaccgtgaggtgcaggatgatgagctagaaaaagtggctaaaatggcctatgctgatcac
tttataaatgatctgccagataagtttaacacagaggttggagaacgaggaattaagctt
tcaggtgggcaacgtcagcgtatttccattgcaagagccctgttacggaaccctcaaatt
ttaatgctagatgaagcaacctcgagtttagatagcaagtcggagatttatgtacagaag
gcgttagacaatttaatgcaaggtcgcacaacattagttatagctcaccgtctatcaaca
gtggtagatgctgatcaaatattatttattgaaaaaggatatattacaggctgtggtaca
catgaaacgctctttgagtcacatgcaatgtatcgtgagtttgcgaaacagcaattacga
attaaagaggaataa
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