Lysinibacillus pakistanensis: GDS87_12130
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Entry
GDS87_12130 CDS
T06280
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
lpak
Lysinibacillus pakistanensis
Pathway
lpak00020
Citrate cycle (TCA cycle)
lpak00785
Lipoic acid metabolism
lpak01100
Metabolic pathways
lpak01110
Biosynthesis of secondary metabolites
lpak01120
Microbial metabolism in diverse environments
lpak01200
Carbon metabolism
lpak01210
2-Oxocarboxylic acid metabolism
Module
lpak_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lpak_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GDS87_12130
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
GDS87_12130
Enzymes [BR:
lpak01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
GDS87_12130
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
NEL
Motif
Other DBs
NCBI-ProteinID:
QGG51651
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All DBs
Position
2522568..2525390
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AA seq
940 aa
AA seq
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MSNNVTTVSSPWSAFSGPNLGYVMEQYDLFLQSPEEVEPELVLLFQQFGAPVVVEGEVAV
ANSTAAPAGDYKKVLAAVRLADAIRTHGHLAADIYPLKNRELQTAQIEESAFNLSVADLA
EIPAAIFFKDVPANVKNGKDAIDYLKSVYTDKVAFEYNHIAATEERDWIQAQIETGSFKQ
ALSSDEKKALLDRLTRVENFEKFIHKTFVGQKRFSGEGLDTQIVLFDEILKTAEANNVEK
VRIGMAHRGRLNVLTHILNKPYDMMFSDFAHVSNELFLPEDGRLEITKGWTGDVKYHMGA
SYNRESGMNVKLAYNPSHLEVGNPVVLGTTRAAQDDTSKPGQAIFNRTKGLGILVHGDAA
FPGQGIVTEVLNFAKTEGFTTGGTIHIIANNMIGFTTEQQDSRSSVYSSDPAKGYEVPVI
HVNADSPEAVSLVGRFAASYRQKFGKDIIVDLIGYRRHGHNETDDPTVTNPETYKLVAQH
ETVRALYGAQLVAEGVVSTDDVAALDAAIYAEMQASYDHVKEMAAKDEHKHLEMPEELKV
EFPQIDTAVGAERLETINEELLVFEEKFEPQKKLGKILEKRREAFASAKIDWGHAETLAY
ATIIQDGTPVRFTGQDAQRGTFSQRHLVLHDKNNGNVFTPLHHISGANASFTVHNSPLTE
AGVVGFEYGYNLENGHVLSVWEAQFGDFANMAQVMFDNFISGARAKWGQKSGLVILLPHG
YEGQGPEHSSSRMERYLQMSAENNWFVANCSNAGNYYHLLRRQAALLGTEGVRPLVVVSP
KYLLRHPLAAANAEQLANGSFQEVIEQPGLGSKPEAVERIVLGTGKVMIDIADRIKDGEG
FDHLHIIRVEQLYPFPKEQVAGIIAKYPNVKEVVWVQEEPKNQGTWNYALETLYELSEGK
KLRYVGRPAMSSTSEGDADSHKAAQAAVVEEAVAEPVKVK
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacaacgttacaactgtaagttctccatggtcagctttctctggtcctaaccta
ggatatgtgatggagcaatacgacttattcttacagtctcctgaagaagtagaaccggag
ttagtattattattccaacaatttggtgcaccagtagtagtagaaggtgaagtagcggta
gctaatagcacagcggctcctgctggcgattacaaaaaagtattagcagctgtgagatta
gcagatgcaatccgtacgcatggtcatttagcggcagatatttatcctttgaaaaaccgt
gaactacaaacagctcaaattgaagaaagcgcgttcaatctaagcgttgcagatttagct
gaaattcctgcagctatcttcttcaaagatgtgccagcaaacgtgaaaaatggtaaggat
gcaattgattacttaaaatctgtttatacagataaagtggcatttgaatataatcacatc
gcagcaacagaagaacgtgattggattcaagcacaaattgaaacaggttcatttaaacaa
gcattatcttctgatgagaaaaaagcattattagatcgcttaacacgtgttgagaatttt
gagaagtttattcataaaactttcgttggtcaaaagcgtttctcaggtgaaggtttagat
acacaaatcgttttatttgatgaaattttaaaaacagcagaagcaaataacgtagaaaaa
gtgcgtattggtatggcacaccgtggccgtttaaatgtattaactcatattttaaataaa
ccatatgacatgatgttctctgattttgcacatgtttccaacgaattatttttaccagag
gatggtcgacttgaaatcactaaaggttggacaggtgatgtaaaataccacatgggtgct
tcttacaatcgcgaatctggtatgaacgttaaacttgcttataacccttcacacttagaa
gtaggaaacccagttgttttaggtactactcgtgcagctcaagatgatacgtctaagcca
ggtcaagcaatttttaatcgaacaaaaggattaggtattcttgtacatggtgacgcggca
ttcccaggtcaagggattgtaacagaggttcttaactttgcgaaaacagaaggattcaca
actggtggtacaattcacatcattgcaaacaatatgattggatttacaactgaacaacaa
gattctcgttcatctgtttattcttctgacccagcaaaaggttatgaagtaccagttatc
catgtgaatgcagatagtcctgaggctgtatcattagttggtcgttttgcagctagctac
cgtcaaaaattcggtaaagatattatcgttgacttaattggttaccgtcgtcacggtcac
aatgaaacagatgatccaactgtaacaaacccagaaacatataaattagtagctcaacat
gaaactgttcgtgctttatatggcgcacaattagtagcagagggtgttgtttcgacagat
gatgttgcggcattagatgcagcaatttatgcagaaatgcaagcttcttatgatcatgtt
aaagaaatggctgctaaagatgagcacaaacatttagaaatgccagaagaattaaaggta
gagttcccacaaattgatacagcagttggtgcggagcgtctagaaacaataaatgaagag
cttttagtgtttgaagaaaagttcgagccacagaaaaaacttggtaagattttagaaaaa
cgtcgtgaagcatttgcttctgcaaaaattgattggggccatgctgaaactttagcctat
gctacgattattcaagacggcactccagttcgttttacagggcaggatgcacaacgtggc
acgttctcgcaacgtcacttagtattacatgataaaaacaatggtaatgtatttacacca
cttcaccatatttctggtgcaaatgcatcatttacagtacacaactctccactgacagaa
gctggggtagtaggctttgaatatgggtataatttagaaaatggccatgtactatcagtt
tgggaagctcaatttggtgactttgctaatatggcacaagtgatgttcgataactttatt
tcaggtgcacgtgctaaatggggtcaaaaatccggtttagtcattcttttacctcatggt
tatgaaggccaaggtcctgagcactcttcaagccgtatggaacgttatttacaaatgtca
gcagaaaataactggttcgtagcaaactgctcaaatgcaggtaactactaccacttatta
cgtcgtcaagcagcgttgctaggaactgaaggtgttcgtccccttgtggttgtatcacct
aaatacctacttcgtcacccattagctgcagcgaatgctgagcaattagcaaatggttca
ttccaagaggtaattgaacaaccaggtctaggttcaaaaccagaagctgtagagcgcatt
gtacttggtactggtaaagtgatgattgacattgcagaccgtattaaagatggtgaaggt
ttcgatcacttacacattattcgtgtagaacaactttacccattcccaaaagagcaagtt
gctggtattattgctaagtatccgaatgttaaagaagttgtatgggtacaggaagaaccg
aaaaaccaaggtacttggaattatgcattagaaacactttatgaactttcagaaggtaaa
aagcttcgttatgtaggtcgccctgcaatgagctctacttcagaaggtgatgcagattct
cataaagctgctcaagccgcagttgtagaagaagcggttgctgagcctgtaaaggttaaa
taa
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