Lysinibacillus pakistanensis: GDS87_18080
Help
Entry
GDS87_18080 CDS
T06280
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
lpak
Lysinibacillus pakistanensis
Pathway
lpak00730
Thiamine metabolism
lpak01100
Metabolic pathways
lpak01240
Biosynthesis of cofactors
lpak04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
GDS87_18080 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
GDS87_18080 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpak03016
]
GDS87_18080 (thiI)
Enzymes [BR:
lpak01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
GDS87_18080 (thiI)
Transfer RNA biogenesis [BR:
lpak03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
GDS87_18080 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
ATP_bind_3
NAD_synthase
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
QGG52724
LinkDB
All DBs
Position
complement(3764826..3766034)
Genome browser
AA seq
402 aa
AA seq
DB search
MIWKEILIRYGELSTKGRNKMDFIRRLRENIRHAFADLGHLHIRTERDRMFIAIQNEIQM
NALLEGLPKIFGIQSFSPVAACEKDIEAMKKLAITIMDTFKNEQLTFKVEVKRTDKTFPL
ESHAIQREIGGYVLPNYKNLSVKVKNPDIELRVEVRHDATYMMAQVIPGAGGMPVGSNGK
SLLMLSGGIDSPVAGYLMMKRGVRLEAIHFFSPPYTSQNSLEKVKVLANELTKFGASIRL
HVIPFTEIQVLIKEKVPSNVSMTTTRRMMLKVADKVREEIDALAIVTGESLGQVASQTLE
SLTAINAVTNTPILRPLISTDKLEIINIAEKIGTYETSIQPFEDCCTIFTPASPKTKPKL
EKVEHYESFSDFDELIERAVKNREVYIFPKKEQETDKFADLL
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatttggaaagaaattttaattcgttatggcgagctttcaacaaaaggacgcaataag
atggattttatccgccgattgcgtgaaaatattcgtcatgcatttgcagatttaggacat
ttacacattcgtacagagcgtgatcggatgtttatcgctatacaaaatgaaattcaaatg
aatgctttattagaaggattacctaaaatttttggtatacaatctttcagcccagtggca
gcatgtgaaaaagatattgaagctatgaaaaagctggccattacaattatggatacattt
aaaaatgagcagcttacctttaaagtagaggtgaagcgcacagataaaacttttccatta
gaatctcatgctattcaacgtgaaattggcggctatgttttaccaaattacaaaaatcta
tcggtaaaggtaaagaatcctgatattgagcttcgtgtagaagtgcgtcatgatgcaact
tatatgatggcacaagtgattccaggtgcaggtggaatgccagtaggttctaatgggaaa
tcgctgctaatgctttctggtggaatagacagtccagtcgctggctatttaatgatgaag
cgtggtgtgcgcttagaggcgattcatttctttagtccaccatatacaagccaaaattca
ttggaaaaggtaaaggtactagcaaatgaattaacgaagtttggcgcaagtattcgttta
catgttattccttttactgaaatacaagtactgattaaagaaaaagtaccttcaaatgta
tcaatgacaacaactcgccgcatgatgttaaaagttgctgataaggtacgggaggaaata
gatgcactagcgattgtaacaggtgaaagccttggacaagtggcaagtcaaacacttgaa
agtcttactgcaataaatgctgtaaccaatacaccgattttacgtcccttaatctcaact
gataaattagaaattatcaatattgctgagaaaattggcacatacgaaacatctatccag
ccatttgaagattgctgcaccatttttacacctgcaagtccaaaaacaaaaccaaaactt
gagaaggttgagcattacgaaagcttctcggattttgatgaattaattgaacgagctgtg
aaaaatcgagaagtctatattttcccgaaaaaagaacaagaaaccgataaatttgcagat
cttttataa
DBGET
integrated database retrieval system
