Secundilactobacillus paracollinoides: AYR62_03590
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Entry
AYR62_03590 CDS
T04675
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
lpd
Secundilactobacillus paracollinoides
Pathway
lpd00190
Oxidative phosphorylation
lpd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpd00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
AYR62_03590
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AYR62_03590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpd03019
]
AYR62_03590
Enzymes [BR:
lpd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
AYR62_03590
Messenger RNA biogenesis [BR:
lpd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AYR62_03590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
ANZ63275
UniProt:
A0A1B2IZS7
LinkDB
All DBs
Position
complement(849783..851948)
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AA seq
721 aa
AA seq
DB search
MTTKINYSDHNYYTNRELSWLAFNDRVLEEARDKTNPLLERLKFLSITQSNLDEFFSVRV
ASLTKLAAVNYPKPDASGMTAEEQLLAVNKSAHQMFIKQYNTLNRSLLPALAQQNIHLLK
PDELTPDQLRFIKDYFHDTLYPVLTPTADDSSRPFPFIANDALNLAIQLNKDKTRYYATL
QIPDNLPRLIKLPGAENDFILVEDVIKPFLGQLFVNYTVKEAAVFRVIRDLDLDVAEEDT
SDLLKEVQQQLKLREQGSVIRLEVESTISKKLLKRLGKELNLKDYAVYEVNGPIDLTVLS
KLASQVTNHADLSYKPFTAYQPTSLTGGHNIFEAIRRHDRFLQHPYDKFDPVIEFIRQSA
MDPGVLAIKMTLYRVSGDSPIIAYLGRAAQNGKQVTVLVEVKARFDEQNNVHWAKQLEKM
GCHVIYGLIGLKTHCKLTLVVRREQGVIRRYMHMATGNYNDVTARFYTDMGLFTVNADMG
IDATNIFNMLSGYSEPPYFHQLHISPHGIRDFINDKLTQATEMAKAGKKVRIRMKMNSLS
DQSMIAHLYKASHAGVKISLLIRGICCLKTGIPDVSDNITVHSIVGRFLEHSRVFIFNLD
GQETVYLSSADLMTRNLNRRVELLFPINDPQIKKRVLTIYKVMWNDNVKTRVLQPDDTFK
HVDRRGHVALDAQAYFADLASVHAKADKAAAEMAKPTEFQPMLSPENQPNPLNYDDGSDP
H
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaaaattaactacagcgaccacaactactataccaaccgggaactaagctgg
ctggcgtttaatgaccgggtgcttgaggaggcccgtgacaaaaccaatccccttcttgaa
cgactcaaatttctcagtattacccaaagtaacttggacgaattctttagcgtgcgggtg
gcgtcgttaacgaaacttgcggctgtaaactaccccaaacctgatgcctcgggcatgacg
gctgaggaacaacttttagccgtcaataagtcagcacaccagatgttcattaaacaatac
aacacactcaaccggtcactactgccggctctggcccagcagaatatccacctcttaaaa
ccggacgagctaacgcctgaccagttacggtttatcaaggattattttcatgacaccctc
tacccggtcttaacaccaactgctgatgacagctcacgaccgtttccatttatcgcaaac
gacgcgctcaatcttgccatccagttgaacaaggacaagacccgctactacgccacgctt
caaatccccgataatttaccacggctcattaaattgcctggggcggaaaatgacttcatc
ttagttgaagacgtcattaaacccttcctcggtcaattatttgtgaactacaccgtgaag
gaagcggctgtattccgggtcatccgggacttggatctcgacgtcgcggaagaagacacc
tctgacctgcttaaggaagtccagcaacagttaaaattgcgtgaacaaggcagcgtcatt
cgacttgaagttgaaagcacgatcagcaaaaaactgctcaagcgtctcggtaaggaactc
aatctcaaggattatgccgtctatgaagtgaacggccccattgacctcactgtgttgagc
aaacttgccagtcaagtcaccaaccatgcagacttaagctacaaacccttcacggcctat
caacccacgtcgctcaccggcggccacaatatcttcgaggccatccggcgccacgaccgt
tttctacaacacccctacgataaattcgatccggtcattgagttcattcggcaatcagcg
atggatcccggcgtacttgccattaaaatgaccctgtatcgcgtctctggggattcaccg
atcatcgcttaccttggtcgggccgcccaaaacggtaaacaggtcactgttttggtagaa
gtgaaagcccgctttgatgagcaaaataacgttcactgggccaagcagctcgaaaaaatg
ggctgccacgtcatttacggcctcattggcctcaaaacgcactgtaagctgaccctcgtc
gttcgtcgtgaacagggtgtcattcgccgctacatgcacatggcgaccggaaactacaac
gatgtgaccgctcggttctacacggatatgggcctgtttaccgtcaatgccgacatgggc
atcgatgccaccaacatttttaacatgctgtcgggttattcagaaccaccctattttcac
caattgcacatctcgccccacggcatccgcgactttatcaatgataagctgacgcaggcg
accgaaatggccaaggccggcaaaaaagtccgcattaggatgaagatgaactccctttcc
gaccagtccatgattgcacatctctacaaggcttcccatgctggcgtaaagatcagtctg
ctcatccgcggcatctgttgtttaaaaacgggcattcccgacgttagtgacaacattacg
gtccattcaatcgttggtcgcttcctagaacatagccgggtctttatttttaatctcgac
ggtcaagaaacggtctatctgtccagtgcggacttgatgacgcgcaatttaaaccggcgt
gttgagttgctgttccccattaacgacccccagatcaaaaaacgggtgctcaccatttac
aaggtcatgtggaatgacaacgtgaagacccgcgtcctgcaaccagatgacacctttaag
cacgttgaccgacgcggccacgtcgcgttggatgcacaagcgtattttgcggacctcgcc
agcgtgcacgccaaggcagataaagccgcggccgaaatggcaaagcccactgaatttcaa
cccatgttgagccccgaaaaccaaccgaacccgttgaactacgatgatgggagtgacccg
cactaa
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