Lolium perenne (perennial ryegrass): 127292296
Help
Entry
127292296 CDS
T08650
Name
(RefSeq) squalene synthase 1-like isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper00100
Steroid biosynthesis
lper00909
Sesquiterpenoid and triterpenoid biosynthesis
lper01100
Metabolic pathways
lper01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
127292296
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
127292296
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lper01006
]
127292296
Enzymes [BR:
lper01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
127292296
Prenyltransferases [BR:
lper01006
]
Terpene biosynthesis
Squalene/phytoene synthase
127292296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
127292296
NCBI-ProteinID:
XP_051177619
LinkDB
All DBs
Position
4:complement(36062226..36072056)
Genome browser
AA seq
414 aa
AA seq
DB search
MGALSQPEEAVALVKLWVAARKMKRQIPPEEHWTFCYDMLRKVSRSFAFVIQQLGPDLRN
AVCIFYLVLRAMDTVEDDTSIPTEEKLPILRDFYRHAYDPNWRFSCGTNHFKVLMDKFRY
VSTAFLELDQGYQKPIEEITRLMGAGMAKFICQEVETIDDYDEYCHYVSGLVGYGLSRLF
HAAGTEDLASDQLSNSMGLFLQKNSIIRDYLEDINEIPKCRMFWPREIWSKYVDKLEGLK
YEENSEKAVQCLNDMVTNALIHAEDCLQYMSLLKDYTNFRLCAIPQVTAIGTFAIFYNNV
NIFRGAVKMRRGLIARIIDETRSMTDVYSAFYEFSSLLESKINDNDPSAALTRKRVDAIK
KTCKSSGLLKRRGYDLEKSKYSSMLIMLALLLVAIIFGVLTPSDSVNMVLVYSK
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgctgtcgcagccggaggaggcggtggcgctggtgaagctgtgggtggccgcg
aggaagatgaagcgccagatcccgcccgaggagcactggaccttctgctacgacatgctt
cggaaggtctcccgcagcttcgcgttcgtcatccagcagctcgggcccgacctccgcaat
gccgtgtgcatcttctacctcgtgctccgggccatggacaccgtcgaggacgacaccagc
atccctaccgaggagaagctacccatcctccgggatttctatcggcatgcctacgacccc
aactggcgtttttcatgtggaacaaaccacttcaaagtgctgatggataagttccgatac
gtctcgacggctttcctggaactggatcaaggatatcaaaagccaattgaagaaatcact
aggctaatgggagcaggaatggcaaaatttatatgtcaggaggttgaaactattgatgac
tatgatgagtattgccactatgtatcagggctagtaggctatggactttctaggctcttt
catgctgctgggacagaagatctggcttcagaccagctttcaaattcaatgggtttgttc
ctgcagaaaaacagtataataagggattatttggaggacataaatgagataccaaagtgc
cgtatgttctggcctcgagaaatatggagtaaatatgttgataagcttgagggcctcaag
tatgaggaaaattcagaaaaagcagtgcaatgcttgaatgatatggtgactaatgctttg
atccacgctgaagattgccttcaatacatgtcattgttgaaagattataccaattttcgc
ctttgtgcaatacctcaggtaacggcaattgggacatttgctattttctacaataatgtg
aatatctttagaggagctgttaagatgaggcgtgggctaattgcacgaataattgatgag
acaagatcaatgacagatgtatattctgctttctatgagttctcttcattgctagaatcg
aagattaatgataacgacccaagtgctgcgctgacacggaagcgtgtggatgcaataaag
aaaacttgcaagtcatccggtttgctaaagagaaggggatatgacctggaaaagtcgaag
tatagttctatgctgatcatgcttgcacttcttctggtggctattatctttggtgtacta
acgccaagtgattcggtcaacatggtccttgtatattctaagtga
DBGET
integrated database retrieval system
