Lolium perenne (perennial ryegrass): 127300392
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Entry
127300392 CDS
T08650
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform isoform X1
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127300392
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lper01009
]
127300392
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127300392
03036 Chromosome and associated proteins [BR:
lper03036
]
127300392
Protein phosphatases and associated proteins [BR:
lper01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
127300392
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
127300392
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
127300392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
HEAT_EZ
Htt_N-HEAT_1
Vac14_Fab1_bd
PDS5
SCD
Cnd1
CLASP_N
TAF6_C
Adaptin_N
CEP104-like_TOG
DUF3102
Motif
Other DBs
NCBI-GeneID:
127300392
NCBI-ProteinID:
XP_051186459
LinkDB
All DBs
Position
5:complement(121250316..121258001)
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AA seq
587 aa
AA seq
DB search
MAMVDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDE
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLSTVEETCVRDKAVESLCRIGAQMKEN
DIVDFFIPVVKRLASGEWFTARVSSCGLFHIAYPSATDPLKTELRTIYGQLCQDDMPMVR
RAAASNLGKFAATIEQSHLKTEIMSIFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRADLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPQLAVQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLEDKVYSIREAAANNLKRLAEEFGPEWAMQHIIPQV
LEKINNPHYLYRMTILQAISLLAPVMGAEITCQKLLPVVINSSKDRVPNIKFNVAKVLQS
LVPILDQSVVEKTVKPCLVELSEDPDVDVRYYANQALQACDQIMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctatggtcgatgagcctctttatccaattgctgtgctgatagacgagcttaaaaat
gaagatattcaactgcgcctcaactccattagaagactttccacaattgcacgggcactt
ggggaagaaagaaccaggaaggaactgataccttttctcagcgaaaacaatgatgatgaa
gatgaggtgcttcttgcaatggctgaagaattgggtgttttcattccttatgttgggggt
gtagaacacgctcacgttttgctcccaccattggagacattgtctacggtggaggagact
tgtgtccgagacaaagcagtcgagtcattgtgccgtattggtgcacagatgaaggaaaat
gacattgttgacttcttcattccagtagtgaagaggctagcgtctggtgaatggtttaca
gctcgagtatcatcctgtggtcttttccatatagcctatccaagtgccacagatccattg
aaaacagaactgaggaccatttatggccagttatgccaagatgatatgcctatggtcaga
agggcggctgcatcaaatctggggaagtttgctgccactattgaacagagccatttgaag
acagaaatcatgtctatctttgatgatttgacccaagatgatcaagattcagtacgttta
ttggctgttgaaggctgtgctgctcttggaaaattgttggaaccgcaagattgtgttgca
catatcctaccagtcattgtcaatttctcccaggataaatcttggcgtgttcgttatatg
gttgccaatcaattgtatgagctgtgcgaggccgttggtcctgagcctacaagagcggat
ctggtgcctgcatatgttcgcctccttcgtgataatgaggctgaagtgcggatagcagct
gctgggaaagttacgaagttctgtaggatattgagtccacagcttgcagttcagcacatt
cttccgtgtgttaaggaattatcatcggattcgtctcagcatgttcgctcagctttggct
tcagtcatcatgggaatggcccctgttctggggaaggatgctaccattgaacaactactt
cctatttttctttctttgctgaaggatgaatttcctgatgtacggctcaacataatcagc
aagcttgatcaagttaatcaggtcattggaattgacttgctgtcacaatctctattgccg
gcaattgtagaacttgcggaggataggcactggagggttcggcttgcaataattgagtac
atccctctgttggccagtcagttaggtgttgggttttttgatgacaagctgggggcactt
tgcatgcaatggctggaagataaggtttactccatcagagaagctgctgcgaacaacttg
aagcggttagcagaggagtttggtccagagtgggcaatgcaacatataatccctcaggta
ttggagaagataaataacccgcattatctgtatcgcatgaccatcctgcaagcaatctca
ttgcttgcgcctgtcatgggtgcagaaataacatgtcaaaagctgctccctgtcgtaatt
aattcatcaaaggacagggtgccgaacatcaagttcaatgttgcaaaagttctgcagtcg
cttgtaccgatccttgaccaatctgtcgtcgagaagacggtgaaaccatgcctcgtcgag
ctcagcgaggaccctgatgtggacgtaagatactatgcaaaccaggcccttcaggcatgt
gatcaaatcatgatgtcaagctaa
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