Lolium perenne (perennial ryegrass): 127327015
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Entry
127327015 CDS
T08650
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper00040
Pentose and glucuronate interconversions
lper01100
Metabolic pathways
Module
lper_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
127327015
Enzymes [BR:
lper01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
127327015
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
Pectate_lyase_4
NosD
Motif
Other DBs
NCBI-GeneID:
127327015
NCBI-ProteinID:
XP_051209752
LinkDB
All DBs
Position
Unknown
AA seq
419 aa
AA seq
DB search
MIMAFGKNARRVLLVLMVMCATSTAKRPAAKEGAAPAPAPEASASEASGATGIFDITNVG
ATSDGKTDCSKELQEAWKSACGAAGQATVLIPKGEFLAGPLNFSGPCKGDVTIHIDGTLL
GTNDLPKYNGGSWINILKVNNLVITGSGTIDGQGANVYTKDPAEAKAFPNSLVLDFVKNG
TVSGITLLNSKFFHMNIYMSEDVKIENLTITAPGDSPNTDGIHIGDSTNINVTDTTIGTG
DDCISIGGGSSHIIVTGVTCGPGQGISVGCLGRYKDEKDVSDVTVKDCVLRSSTNGVRVK
TYENAVKSITASKLTFENIKMEDVANPIIIDQNYCPEKVCTAKSKSAVTVKDVIFRNITG
TSSTPAAVSLLCSDKQPCSGVELIDVNVEYSGENNKTIGVCNNAKGTAKDTLQALACLA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgataatggctttcggtaaaaatgccagaagggtgttgctggtcctgatggtcatgtgc
gccacaagcacggcaaaaaggcctgcagccaaggagggcgctgctcctgcccccgcaccc
gaagccagcgcatcggaggcgtccggggccacagggatcttcgacataaccaatgtcggc
gcgaccagcgatggcaagacggactgttcaaaggaactccaggaggcgtggaagtcggcg
tgcggggcggccgggcaggccacagtcctcattccaaagggagaatttctggctggccct
ctcaacttcagcgggccgtgcaagggcgacgtaaccatccatatcgacggcaccctgtta
ggaaccaacgacctacccaagtacaatggtggcagctggatcaacatccttaaggtcaat
aaccttgtcatcaccggctctggcacgatcgacggtcaaggcgccaatgtctatacaaag
gaccctgcagaggctaaggcctttccaaactcgttggtgctggacttcgtgaagaatggg
actgtctctggaatcacgctgctgaattccaagttcttccacatgaatatctacatgtca
gaggacgtgaagatcgagaatctgaccatcaccgcacctggggacagccccaacaccgac
ggcatccacatcggcgactccactaacatcaatgtgacggacaccaccatcggtaccgga
gacgactgcatctccatcggaggcggaagttcccacatcatcgtcacgggcgtcacctgt
gggccggggcaagggatcagcgtgggctgcctcggcaggtacaaggacgagaaggacgtt
agcgatgtgacggtcaaggactgcgtgctcaggagcagcaccaacggcgtccgcgtcaag
acctacgagaacgcggtgaagtctatcacggcgtccaagctgacgttcgagaacatcaag
atggaggacgtggccaaccccatcatcatcgaccaaaactactgccccgagaaggtatgc
accgcgaagagcaaatccgcggtcacagtcaaggacgtcatcttccgaaacatcaccggc
acgtcgtccacgccggcggctgtcagcctgctatgctctgacaagcagccgtgtagcgga
gtggagctaatcgacgtcaatgtggagtacagcggggaaaacaacaagaccatcggggtg
tgcaacaacgccaagggcactgcaaaggacacactccaggccctcgcctgcctcgcctga
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