KEGG   Lolium perenne (perennial ryegrass): 127336956
Entry
127336956         CDS       T08650                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
lper  Lolium perenne (perennial ryegrass)
Pathway
lper03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lper00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    127336956
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lper03021]
    127336956
Enzymes [BR:lper01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     127336956
Transcription machinery [BR:lper03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     127336956
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 127336956
NCBI-ProteinID: XP_051219782
LinkDB
Position
2:complement(334972139..334983667)
AA seq 1249 aa
MEDSPRDNGQWTSSPEPELEPMMLDDNVESRSHTMDDSNGKSSMGVDRDQSFMDADMNGK
SPLDLDDESKGKCSSSHPEVPIDMSLESLEKFCREASRSFFDEIGLISHQLNSYNQFVSH
GLQELFDSLEEITVEPDYDPSKKGPGGWRHAIIKFGKVKLHRPVFWSEKKSRDLDLKPRH
ARLQNMTYSSQMEVDVNIKVYSMEKSDKAKTGNDLSGHSKDFIVDKNQPMPIGRLPVMVN
SNLCWLHKDKKSEHKDKKSEYGNKEIDCLFDSGGYFLIKGIEKVFIAQEQKCLTRIWVAD
RPCWTVSYSSEIKIRRIYIKLIDSTKNNDISGNKIISISFLYANMPIWLMFFALGISSDK
EAFEMIDTGDSDASVMDAISATINESDELCEGFRKSSKARQYVDDLVKSQKFPPAESFDD
YVSKNLFPGIRGNRNKAYFLGYMVKCLLMAFTGRRKCDNKDDFRNKRLELAGELLGRELR
AHLRHAERLMVKALQRDLNSDRDLEFPLHCFDSSIITNGINRAFSTGSWCHPSKRNERCP
GVVAMLRRTNPLQTMSDLRKSRLQVAYAGKVGDARYPNPSYWGKMCFMSTPDGENCGLVK
NLAVTAIVSSKVAQPLIDRFVSCGMNKLDEIHVEEIPKMDKIFLNGDWVGSCTDPASFVR
RLRCMRRGGLVDRQVEIKRDKHQSPGEVRVFSDAGRILRPLLVVENLNKITKRKGHHPYS
FHTLLQQEIIEFIGVEEEEDIRCAWGIKHLFPTSEEEDPGYTHCELDGSFLMGLSCGLIP
FANHNFARRVLYQSEKHSQQAIGYSTTNPRTRVDTLSHQLFYPQKPLFKTFTADCIGRSN
YPFGRKDDFSRPEYSNGQNAIVAVNVHQGFNQEDSLILNRASLERGMFRTELIRSYKAEV
DTKGPIKRLKMKEKVNFGKMQSKKGRVDNLDDDGLPYVGASLQSGDIVIGKVSESGEDHS
IKLKHTEKGIVQRVLLSANDEGKNFAAVSLRQVRAPCVGDKFSSMHGQKGVAGFLECQEN
FPFTRQGIVPDVVINPHAFPTRQTPGQLLEAALGKGITLGGKIRYATPFTTASVEVISEQ
LHKAGFQRWGAESVLNGHTGARTESLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQP
VVDRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSEMHVCQTCERAANIIIRPVQ
GGKKIRGPYCGFCQSSENIVKIPVPYGSKLLYQELFSMGICLKFKTEVR
NT seq 3750 nt   +upstreamnt  +downstreamnt
atggaggattcaccaagggacaatgggcaatggacaagtagccctgagcctgagctggaa
cctatgatgctggatgacaatgtagagagcagatcacataccatggatgattcgaacggg
aagtcttctatgggtgttgacagagatcagtcttttatggatgcggatatgaatgggaaa
tcacccctggacctggatgacgagagtaaagggaagtgctcttcgtcacatccagaagtt
cccattgacatgagcttggaaagcctagagaagttctgcagggaagcatctaggtcgttt
tttgacgagattggtctgattagccaccagttgaattcctacaaccagtttgtctcgcat
gggctccaggagctttttgattcactagaggaaataaccgtcgagccagattatgatcct
tcaaagaaaggaccaggtggttggaggcatgccatcatcaagtttgggaaagtgaaactg
cacaggcctgtattttggtctgaaaagaagtcacgtgacctcgatctcaagccgagacat
gctcgcctccaaaatatgacatattcttcccaaatggaagtagacgtgaatattaaggtt
tattcgatggagaaaagtgacaaggctaaaacagggaatgatctttctggtcacagcaaa
gattttattgtggataaaaatcaaccgatgcctattggtcgccttccagttatggttaat
tcaaacttatgctggttgcataaagataagaaaagtgagcataaagataagaaaagtgag
tatggaaataaggaaattgactgcctttttgattctggtggatactttttgatcaaggga
atagagaaggtatttattgcgcaagagcaaaaatgtttgaccaggatttgggttgctgac
cggccttgctggactgtctcttattcatctgaaatcaaaataagaagaatatatatcaaa
ctaattgattctacaaagaataatgatatcagtgggaacaaaatcatttccatttccttt
ttgtatgccaatatgcctatttggctaatgttttttgctctaggcatatcatctgacaag
gaagcatttgagatgatagacacgggagactctgatgcttctgttatggacgcgatatct
gcaactattaatgaatcagatgaactgtgtgaaggctttcgtaagtccagtaaagcccgc
cagtatgttgatgatctggtcaagagtcaaaaatttcctccagcagagtcgtttgatgat
tatgtttccaaaaatctgtttcctggtataagagggaataggaataaagcatatttctta
ggttacatggtcaaatgccttctaatggcttttactgggaggcgcaaatgtgataataag
gatgatttcaggaacaagaggttggagctagctggtgaattgcttggaagagaacttcgg
gcacatcttaggcatgcagagagactaatggttaaggccttgcagagagatttgaatagt
gaccgtgatttggaatttcctctgcactgctttgattcttcaattattactaatggtata
aatcgtgccttttctactggttcttggtgccatccctccaaaagaaatgaaagatgccca
ggagttgttgcaatgctaaggagaacaaatcctcttcaaacgatgtcagacttgaggaaa
agtcgcctgcaggttgcttatgctgggaaagttggtgatgcaagatatcccaatccgtcc
tactggggaaagatgtgttttatgtccacccctgacggagaaaactgtggacttgttaaa
aatctggctgtgactgctattgttagctctaaagtggcacagccattgattgacagattt
gtttcttgtggaatgaataaactggatgaaattcatgttgaggagattcctaaaatggat
aagatcttcctcaatggcgattgggtaggatcctgtactgatccagcttcatttgtcagg
cgtttacggtgcatgagacgcggcggtctggttgatcgacaggttgaaatcaaaagggac
aagcaccaatctcctggagaagtacgggtgttttctgatgcagggcgaatcctcagacct
cttcttgtggttgagaatctaaataaaattacaaaacggaagggccaccacccttactct
tttcatacactattgcaacaagaaataattgagttcattggtgttgaagaggaggaagat
ataagatgtgcctggggaattaagcacctatttccaaccagcgaggaggaggatcctggt
tatactcactgtgagctggatggatcttttctgatgggattaagttgtggtcttatccct
tttgcaaatcacaattttgctcgaagggtgctgtaccagtcggagaaacactcgcagcaa
gctattggatactccacaacaaatccacgtaccagagttgatactctttctcatcaactt
ttctaccctcagaaaccccttttcaaaacatttacagctgattgtattggaagatcaaat
tatccttttggaagaaaagatgatttttcaaggccagagtattccaatggacaaaatgca
atagtggcagtcaacgttcatcagggattcaaccaagaggactcactgattttgaatagg
gcttctcttgaacggggtatgtttagaactgagctcatccggagctataaggcagaagta
gataccaaagggcccatcaaacgactgaaaatgaaggaaaaggtaaactttggtaaaatg
caaagcaagaaagggcgagttgacaatctggatgacgatggattaccatacgtgggtgca
agtctccagagtggtgacattgtaattggcaaagtgtcagaatctggtgaagatcatagt
attaaactgaagcatacggaaaagggaatagtccagagagtgttgctctcagccaatgat
gaggggaagaattttgctgctgtgtctttaagacaggttcgagcaccttgcgtcggagat
aaattttctagcatgcatggacagaaaggtgttgctggttttctagaatgtcaggagaat
tttccttttactcgccaaggaatagttccggatgttgtgataaatccgcatgcctttcct
acccgtcaaactccaggccagctgcttgaagctgctttggggaagggaatcactcttggt
ggtaaaattagatatgcaacaccattcacaacagcatcagttgaagttatctcggaacaa
ttgcacaaggctggatttcaaagatggggagctgaaagcgttctcaacggccacactggt
gcaagaacggaatcactgattttcatgggtcctaccttctaccagaggctgacacacatg
gctgaagacaaggtgaaattccggaacaccgggccagtgcatcccctcacgaggcaaccc
gtcgtggacaggaagaggtttggaggagtcaagtttggagaaatggagcgcgactgcctc
ctcgcccatggcgcggctgccaacctacacgagcggctctttatgctcagcgacttctcg
gagatgcatgtctgccagacatgcgagcgggcggcgaacatcatcataaggcctgtccag
ggagggaagaagatccgaggcccctactgtgggttctgccagtcttcggagaacatagtc
aagattcctgtcccctacggctcgaagctgctctaccaggaactcttcagcatggggatc
tgcctcaagttcaagaccgaggtccgctag

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