KEGG   Lolium perenne (perennial ryegrass): 127341533
Entry
127341533         CDS       T08650                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like isoform X1
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
lper  Lolium perenne (perennial ryegrass)
Pathway
lper03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lper00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    127341533
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lper03021]
    127341533
Enzymes [BR:lper01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     127341533
Transcription machinery [BR:lper03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     127341533
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 127341533
NCBI-ProteinID: XP_051223363
LinkDB
Position
3:54146728..54160061
AA seq 1250 aa
MEDPPRDSGQSTNGPEPELESTILDDTGGSRSHTMDDSNGQSSMDVNRDLSFMDVDANGR
SSLDDDSKGKYSSESHPEVPIDMSLGSLEEFCKEASRSFFDEIGLISHQLNSYNQFVSHG
LQELFHSLGEITVEPDYDPSRKGPGGWRHAIIKFGKVELHKPVFWSEKTDFAEESLVLEP
RHARLQNMTYSSKMEVEVNIKVYSMEKSDKAKTGNDLSVQSRVLIMNETTTMNIGRLPVM
VNSNLCWLHKDKKSEHKDKKSGHADKAIDCLYDSGGYFLIKGMEKVFIAQEQKCLTRIWV
ADRPYWTVSYLSEIRKRRVYITLIDSTKNNDTSGSKIISFSFLYANMPIWLMFFALGVSS
DKEAFDMIDMGDCDASVMNAISATISESGELCEGFRKSDKARQYVDDLVKSQKFPPAESF
DDYVAKNLFPGISGNRNKAYFLGYMVKCLLMAFTGKRKCDNKDDFRNKRLELPGELLGRE
LRAHLRHAERLMVKALQRDLNSDRDLEFPLRYLDASVITNGINRAFATGSWCHPFKRNER
CSGIVATLRRTNPLQMMSDLRKSRQQVAYAGKAGDARYPNPSYWGKMCFMSTPDGENCGL
VKNLAVTAIVSCRVAQPLIDRFISCGMNKLDEIHAEEIPKMVKIFLNGDWVGSCTDPASF
VMRLRCMRRGGLIDPQVEIKRDKHQLPGEVRVFSDAGRILRPLLVVENLNKITKRKGCPY
SFQTLVQQEIIEFIGVEEEEDIQCAWGIRHLFPSSGQEVPGYTHCELNGSFLLGLSCGLI
PFANHNFARRVLYQSEKHSQQAIGYSTTNPRTRVDTLSHQLYYPQKPLFKTVTADCIGRS
DYPFGRKDGFSRPEYFNGQNAIVAVNVHQGFNQEDSLVINRASLERGMFRTELIRSYKAE
VETKEPIKRLKMKEKVNFGKMESKRGRVDNLDDDGLPYVGASLQSGDIVIGKVSESGEDH
SIKLKHTEKGMVQRVLLSANDEGKNFAVVSLRQVRSPCVGDKFSSMHGQKGVVGFLESQE
NFPFTCQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIALGGKIRYATPFTTASLEVISE
QLHKAGFQRWGAEGVLNGQSGERMKSLIFMGPNFYQRLTHMSEDKVKFRNTGPVHPLTRQ
PVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSEMHVCQTCERAANVIIRPV
QGGKKIRGPYCGFCRSSENIVRIAVPYGAKLLYQELFSMGICLKFKTEVC
NT seq 3753 nt   +upstreamnt  +downstreamnt
atggaagatccaccaagggacagtgggcaatcaacaaatggccctgagcctgagctggaa
tctacgatactggatgacactggagggagcagatcccataccatggatgattcgaacggg
cagtcttctatggatgttaacagagatctgtcttttatggatgtggatgcgaatgggaga
tcatccctggatgatgatagtaaagggaagtactcttctgagtcacatccagaagttccc
attgacatgagcttgggaagtctagaggagttctgcaaggaagcctcaaggtcatttttt
gacgagattggtctgattagccatcagttgaattcctacaaccagtttgtctcgcatggg
ctccaggagctttttcattcgctaggggaaattaccgtcgagccggattatgatccttca
aggaaaggaccaggtggttggaggcatgccatcatcaagtttgggaaagtggaactacat
aagcctgtattttggtctgaaaaaactgattttgctgaggagtcactcgtcctcgagccg
agacatgctcgcctccaaaatatgacatattcttccaaaatggaggtagaagtgaatatc
aaggtttattctatggagaaaagtgacaaggctaaaacagggaatgatctttctgttcag
agcagagttcttatcatgaacgaaactacaacaatgaatattggccgccttccagttatg
gttaattcaaacttatgctggctgcataaagataagaaaagtgagcataaagataagaaa
agtgggcatgcagataaggcaattgactgcctttatgattctggtggatactttttgatc
aagggaatggagaaggtattcatcgcgcaagagcaaaaatgcttgaccaggatttgggtt
gctgaccggccttattggactgtctcttatttgtctgaaatcagaaaaagaagagtatat
atcacactaattgattctacaaagaataatgataccagtgggagcaaaatcatttccttc
tcctttttgtatgccaatatgcctatttggctaatgttttttgcgctgggcgtatcatct
gacaaggaagcatttgatatgatagacatgggagactgtgatgcttctgtcatgaacgcg
atatctgcaactattagtgaatcaggtgaactgtgtgaaggctttcgcaagtccgataaa
gcccgccaatatgtggatgatttggtcaagagtcaaaaatttcctccagcagagtcgttt
gatgattatgttgctaagaatctgtttcctggtataagtgggaataggaataaagcatat
ttcttaggttacatggtcaaatgccttctcatggcttttactgggaagcgcaaatgtgat
aataaggatgatttcaggaacaaaaggttggagctacctggtgaattgcttggaagagaa
cttcgtgcacatcttaggcatgcagagagactcatggttaaggccttgcagagagatttg
aatagtgaccgcgatttagagtttcctctgcgctaccttgatgcttcagttattactaat
ggtataaatcgtgcctttgctactggttcttggtgccaccccttcaaaagaaatgaaaga
tgctcaggaattgttgcaacgctaaggagaacaaatcctcttcaaatgatgtcagacttg
aggaaaagtcgccagcaggttgcttatgctgggaaagctggtgatgcaagatatcccaat
ccgtcctactggggaaagatgtgttttatgtccactcctgatggtgaaaactgtgggctt
gtgaaaaatctagctgtgactgctattgttagctgcagagtggcacagccattgattgac
agatttatttcttgtggaatgaataaactggatgaaattcatgccgaggagattcctaaa
atggttaagatctttctcaatggcgattgggtaggatcctgtactgatccagcttcattt
gtcatgcgtttaaggtgtatgagacgcggtggtctgattgatccacaggttgaaatcaaa
agggacaagcaccaacttcctggagaagtacgggtgttctctgatgcagggcgaatcctc
agacctcttcttgtggttgagaacctaaataaaattacaaaacggaagggctgtccttac
tcttttcagacactagtgcaacaagaaataattgagttcattggtgttgaagaggaggaa
gatatacaatgtgcatggggaattaggcacctatttccgagcagtgggcaggaggttcct
ggttatactcactgcgagctgaatggatcttttctgttgggattaagttgtggtcttatc
ccttttgcaaatcacaattttgctcgaagggtgctgtaccagtcggaaaaacactcacag
caagctattggatactccacaacaaatccacgtaccagagttgatactctttcccatcaa
ctttactaccctcagaaaccccttttcaaaacagttacagctgattgtattgggagatca
gattatccttttggaagaaaagatggattttctaggccagagtatttcaatggacaaaat
gcgatagtggcagtcaatgttcatcagggattcaaccaagaggattccctggttataaat
agggcttctcttgaacggggcatgttcagaactgagctcatacggagctataaggcagaa
gtagagaccaaagagcccatcaaacggctgaaaatgaaggaaaaggtgaactttggtaaa
atggaaagcaagagagggcgagttgacaatcttgatgacgatggattaccatacgtgggt
gcaagtctccagagtggagacattgtcattgggaaagtgtcagaatctggtgaagaccat
agtattaaactgaagcatacggaaaagggaatggtccagagagtgttgctctcagccaat
gacgaggggaagaattttgctgttgtgtctttaagacaggttcgatctccttgtgtcgga
gataaattttctagcatgcacggacagaaaggtgttgttggttttctagaatcccaggag
aacttcccttttacttgccaaggaatagttccggatattgtgataaatccacatgccttt
cctacccgtcaaactccaggccagctgcttgaagctgctttggggaagggaattgctctt
ggtggtaaaattagatatgcaacgccattcacaacagcatcacttgaagtgatctcggaa
caattgcacaaggctggatttcaaagatggggagctgaaggtgttctcaacggccaaagt
ggtgaaagaatgaaatccctgattttcatgggacctaacttctaccagaggctgacacac
atgtccgaagacaaggtgaaattccggaacacggggccagtgcaccccctcacaaggcaa
cctgtcgcagacaggaagaggtttggaggtgtgaagtttggcgagatggagcgcgactgc
ctccttgcccacggagcagctgccaatctccacgagcggctcttcatgcttagcgacttc
tcagagatgcatgtgtgtcagacgtgtgaacgggcggcgaacgtcatcataaggcccgtc
caaggagggaagaagatccgaggtccttactgtgggttctgccggtcttcggagaacata
gtcaggattgccgtcccctacggcgcgaagctgctctaccaggaactcttcagtatgggg
atctgcctcaagttcaagacggaagtctgctag

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