Lolium perenne (perennial ryegrass): 127341636
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Entry
127341636 CDS
T08650
Name
(RefSeq) DNA mismatch repair protein MSH7
KO
K08737
DNA mismatch repair protein MSH6
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
127341636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lper03400
]
127341636
DNA repair and recombination proteins [BR:
lper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
127341636
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
127341636
NCBI-ProteinID:
XP_051223469
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Position
3:59227009..59236156
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AA seq
1213 aa
AA seq
DB search
MQPRRQQQSILSFLHPRRTPAGDPLGPAPGAGSTPERPPRPPAAASVDGIMERLARPPSQ
GRNKDASQVRHVEERALPGKNQRISDERPSALFSGPYSDEYSRETTLFADVSPLQEPLKR
STSSSMDKFVRASTLFPEPGSDEALFQECPKKFSSESPNNQYTKAASMFEDFDVQTPSQD
PLRRIFSGPFRGADTPLSEYGSDPTQHPSKKLPLVSSSGEHVRAATPLGLGSDDSPTMNH
SKKLFTGSSDSSYIKATNLFAEFDSNGTPLQNQSKKFPIFLNAKHTGAPDALFPELDSVS
LKPETPLTRAVTPRAKRVQQDHSPLWGSNKKVKSAQCSPVEKMVHDEMAEGARSKFEWLN
PPNIRDANKRRPEDPLYDKRTLFIPPDALRKMSTSQKQYWTVKCKYMDVVLFFKVGKFYE
LYEVDAEVGQKELDWKMTISGVGKCRQVGISESGIDDAVEKLLARGYKVGRIEQMESAVQ
AKARGPNSVIERKLVHVSTPSTAADSNIGADAVHLLALKEVTIASNGSRVYGFAFLDYAA
LKIWVGSLEDDDSSAALGALLVQVSPREIIYESSGLSRESRKSMLKYASAGSVKMQLTPL
SGADFSDASQIKMLVHSKGYFKASTDSWLSALDYSVNQEAVICALGGLIGHLTRLMLEDA
LKNGEVLPYNVYQTCLRMDGQTLVNLEVFSNSFDGGSSGTLYKHLNHCITASGKRLLRRW
ICHPLKDVNAINRRLDIVEGFIQNCGVGSITLEHLRKVPDLERLLGRVRSTVGLTSAVML
PFVGDKILKRRIKTFGMLIKGLRVGINLLSVLRREDHGISALSKSVDIPTLSSLDELVHQ
FEEAIDNDFPRYQDHDIEDDDANTLAILVELFVGKASEWSLVINAISVVDVLRSFAAMAL
SSSCTMCRPRILVKEKVPILRMKGLWHPYAFAESATGPVPNDLSLGQDLSGHNRFAFLLT
GPNMGGKSTIMRATCLAILLAQLGCYVPCTSCELTPADSIFTRLGATDQIMSGESTFLVE
CTETASVLQNATEDSLVLLDELGRGTSTFDGYAIAYAVFRHLVEQVRCRLLFATHYHPLT
KEFGSHPHVSLQHMACMLRPRSGGSGEKELTFLYRLASGASSESYGLQVATMAGIPMSTV
EKASVAGQMMKSKIARNFKSSEGRAEFSTLHEDWLRTILAIGGVKDGHLDEDTMDTMFCV
AQELKSYFRKGGR
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgcgccggcagcagcagtccatcctctccttcctccacccgcgccggaccccg
gcgggggaccccctcggccccgcccccggcgccggctcaacccccgagaggcccccgcgc
ccccccgccgcggcctcggtcgacggcatcatggagcggctcgcgcggccgccgtcgcag
ggcagaaacaaagacgcctcccaggttagacatgttgaggagagagccttacccggtaaa
aatcaacgtatctcagatgagcgcccaagtgcattattctccggaccatacagtgacgag
tacagcagagaaactacgctattcgcagatgtcagtcctctgcaggagccgctgaaacgc
tccacgagttcttccatggataagtttgttagagcaagcactctgttcccagaacctggt
tcagatgaagctctgtttcaggagtgtccgaagaagttctcctcagagtctcccaataac
cagtacactaaagctgcttcaatgtttgaagactttgatgtacaaactccttcccaggac
cccttgaggagaatcttctctgggccgtttcgtggagcagatactcctttatcagagtat
ggttcagatccaactcagcatccatcgaagaagttaccattggtctcttcaagtggtgaa
catgtcagagcagcgacaccacttggacttggttcagatgactctcctacaatgaatcac
tcaaagaagctattcactggatcttcagactcttcatacattaaggcaacaaatctgttt
gcggaatttgattcgaatggaactccactgcagaaccagtcgaaaaagttcccgattttt
ctgaatgctaaacatactggagcacctgatgcactatttccggaacttgattctgtttct
ctgaaaccagaaacgccactgacgcgagcagtgacacctcgtgccaagcgagttcaacag
gaccactctcctttgtggggttcaaacaagaaggtgaaatcagcccaatgttctccagtt
gagaagatggttcatgatgaaatggctgaaggtgcacgtagtaaatttgaatggctgaat
cctccgaatatcagggatgcaaataaaaggcggccagaggatccgctttatgacaagaga
actcttttcattccacctgatgcactcagaaagatgtcaacatctcaaaagcaatactgg
actgttaagtgcaaatatatggatgttgtcctctttttcaaagtgggaaaattttatgag
ctctatgaagtagatgctgaggttggtcaaaaggaacttgactggaaaatgactatcagt
ggtgtgggcaaatgccggcaggttggcatttcagagagtgggatagatgatgctgttgag
aagcttttagctcggggatataaagttggaaggatagaacaaatggaatctgcagtacag
gcaaaagctagaggaccaaattcagttattgaaaggaagttagttcatgtttccacacca
tcaactgcagctgacagcaatataggggctgatgctgttcatcttcttgcattgaaagag
gttaccatagcttctaatggttctcgggtgtatggatttgcttttctagattatgccgct
cttaaaatatgggtgggttcactcgaggatgatgattcatctgcagctttgggggctttg
ctggtgcaggtgtccccgagggagataatctatgaatcctcaggcctctcaagagaaagc
cgtaaatctatgttaaaatatgcctcagcaggctctgtgaaaatgcagctgaccccatta
tctggggcagatttctctgacgcttcacaaattaaaatgctagtgcattctaaaggatac
tttaaagcatcaacagattcttggttatctgcattggattattcagtgaatcaagaagca
gttatttgtgcacttggtggacttattggtcatttgactagacttatgctagaggatgct
ctaaaaaatggggaagtgttaccttacaacgtgtaccaaacttgtctaaggatggatggt
cagactcttgtgaacctggaggttttcagcaatagttttgacgggggctcatcaggtact
ctgtacaagcacctcaatcactgcataactgcatccggtaagcggcttctaagaagatgg
atatgccatccactaaaggatgtcaatgctataaataggaggcttgatattgttgagggc
ttcattcaaaattgtggggtaggctctattacacttgagcatctccggaaagttcctgac
cttgagaggttacttggacgagttagatccaccgtggggttaacatctgctgttatgttg
ccctttgttggagataagatattaaaaagacggattaaaacgttcggcatgcttatcaag
ggccttcgggttggaatcaacttattaagtgtcttgcgaagagaggaccatggtatctct
gcactgtcaaagtcagtggatattccaaccctgagctctcttgatgaactagttcatcaa
tttgaagaagctatagacaatgactttccacggtaccaggatcatgatatcgaagacgat
gatgctaacaccttggctattttggtggaactatttgttggaaaagcttctgaatggtct
ctggtgatcaatgccatcagtgttgttgatgtccttaggtccttcgcagcaatggcattg
tcgtcatcttgtaccatgtgcagaccacgtattctggtgaaagagaaagtgccgatactt
cggatgaagggtctatggcatccctatgcttttgctgaaagtgcaactgggcctgtgcca
aatgatttatctcttggccaggatttatctggtcataatcgctttgcatttttgttgact
ggtccaaatatgggaggcaagtctactataatgcgtgccacctgcttggctattttactt
gcccagcttggatgttatgtcccctgcacatcatgtgaattgacccctgctgactccatc
tttacgcggcttggtgcaacagatcagattatgtctggagaaagcacctttcttgtggaa
tgtactgagactgcatctgttcttcagaatgcaaccgaggattctcttgtcttgcttgat
gagcttggcagaggaactagcacattcgatggatatgcaatcgcatatgctgtattccgt
cacttggtggaacaggtgcgatgccgtctgctcttcgccacacactaccaccctctcacg
aaagagtttggctcccacccccacgtgagcctccagcacatggcttgcatgctcaggcca
aggagcggaggcagcggcgagaaggagctcaccttcctctaccggctcgcatcaggggcc
tcctcggagagctatggcctgcaggtcgctacaatggcagggatcccgatgtccacagtg
gagaaggcgtcagtcgcgggccagatgatgaagtcgaagatcgccaggaacttcaagtcg
agcgaagggcgagcggagttctccaccctccacgaggactggctgagaacaatcctggca
atcggtggtgttaaggacgggcacctggacgaggacaccatggacacgatgttctgcgtc
gcccaggagcttaagtcttacttcaggaaaggaggaagatga
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integrated database retrieval system