Lytechinus pictus (painted urchin): 129269258
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Entry
129269258 CDS
T09066
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03020
RNA polymerase
lpic03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129269258
09124 Replication and repair
03420 Nucleotide excision repair
129269258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpic03021
]
129269258
03400 DNA repair and recombination proteins [BR:
lpic03400
]
129269258
Transcription machinery [BR:
lpic03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
129269258
DNA repair and recombination proteins [BR:
lpic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
129269258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
129269258
NCBI-ProteinID:
XP_054762710
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All DBs
Position
2:10635450..10654755
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AA seq
287 aa
AA seq
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MPYANQPTIQLTELTDDNVKFIIEDTDLSTLFFSFFCIDHSVANSIRRTMLAEVPTIAID
WVEIQANSSVLHDEFISHRVGLIPLTSDEVVDKLNFNRDCGCEEFCSECSVELSLDVKCT
DDQTRHVTSRDLLSSNQKVVPVPSRNQESSDYGEVDDILIVKLRKGQELRLRAYAKKGFG
KDHAKWVPTAAIAFEYDPDNVMRHTVYPKPDEWPKSEFTEVDEDTPQGKFDGDAVPNKFF
FNVESIGALTPENIVFSGLSVLKKKLSDLQTQHSHEAQAQAEGLTIN
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgccttatgccaaccaaccaacgatacagttaacggagctgactgatgacaatgtgaag
ttcataatcgaagacacagatcttagtactcttttcttttcttttttctgtattgaccac
agtgttgcgaacagtatcaggaggactatgctggcagaggttcccacaatagcaattgac
tgggtagaaattcaggcaaacagctcagtccttcatgatgaatttatttctcatagagtt
ggtctcattccacttacaagtgatgaagtagttgacaaacttaacttcaacagggactgt
ggatgtgaggagttttgttcagaatgctcagtggagctgtcattggacgtgaagtgtaca
gatgatcagacacgtcatgtgacatccagggatctactctcaagtaaccagaaagtcgtc
ccggttccatcaagaaatcaagagtcaagtgactatggtgaagtagatgacatccttatt
gtaaaactgaggaaaggccaggagctgaggttacgagcgtatgccaagaaaggttttggt
aaagaccatgccaaatgggtccccactgcagccatcgcatttgaatacgacccagacaat
gtgatgaggcatacagtgtacccaaaaccagatgagtggcctaagagtgaattcacagaa
gtagacgaagacacaccacagggcaagtttgatggtgatgcagttcccaataagttcttc
tttaatgtggagtctattggtgctttgacaccagaaaacattgttttctctgggttatct
gttctgaaaaagaaattgagtgatctgcagacccagcatagccacgaagcccaggcacag
gccgagggtctaaccattaattga
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