Lytechinus pictus (painted urchin): 129270832
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Entry
129270832 CDS
T09066
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129270832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpic03021
]
129270832
Enzymes [BR:
lpic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129270832
Transcription machinery [BR:
lpic03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
129270832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
129270832
NCBI-ProteinID:
XP_054764138
LinkDB
All DBs
Position
11:complement(15713107..15746284)
Genome browser
AA seq
1404 aa
AA seq
DB search
MRQSSGQEGSLDVAVKTEFEVNSRDKENEDQSILSTVPGKTLPEKLQNALTQLQTHVNCV
IDSDLDKVSTDKAPGIKQLLERKEGLFRKHMMGKRVNYAARSVISPDPYINTDEIGIPEV
IAKRLTYPQPVTDWNAQELRQMVMNGPDVHPGALLIENEDGSQVKLRADNQSQRESVAKR
LLTPSNFNKQNIGSKKVHRHLQTGDIVLLNRQPTLHKPGIMAHKVRVLPGEKTLRLHYSS
CKTYNADFDGDEMNVHFPQNELGRAEALTIVSTNHQYLVPKDGTPLGGLIQDHIVAGVRM
TVRGRFFTRLEYQQLVYCSLTDKEGPVKCLPPCMIKPTLLWSRKLXSLVIINTIPEGCKP
LDFVGKSKITNKAWIKGKPHKPKAGGSALVGLDMCESEVIVRAGELLSGVLDKGNYGPTP
YGLVHCIYELYGGHIAGKLLSHFGRLFTTFLQQHTGFTLGPEDIIVTEKADEDRRETLDQ
TKDCGSEAVAKALGVEEFTGVHANKLAKKYEDAHRKPDGNDLKEIDREMKTKTDHFSNHV
GNTCLGSGLLKHFPENNLQLVVLSGAKGSVVNCLQISCLLGQIELEGRRPPLMVSGRSLP
SFLPYDTSPRSGGYVAGRFLTGIKPQEYFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHL
EGLVVNYDQTVRDSDGSIVQFQYGEDGLDISKTPFLHKEQFPFLLQNSKAHLPSRTKNSR
LSSDPSQAEKLFRKIKRWKEKHSHRPRSERRSPFLEFCNKEYAAILEQIQSDEDDVLRAY
NKAKKEIIRRWREVTDKHRYEKKTTPCPDPVSTQMRPDRHLGAISEKLEILIHDYLDSRL
PTSKDIDGTDDETKLKSLMYSKYQRALCEPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRG
DMNVTLGIPRLREILMVASANIKTPSMTIPFINPEISAKKIGRIRRQLGRVHLSNVLEDI
GIWETYEFPTAHDHYRVYRIRLNFLPHVDYKDDHNATPSSILSYIETTFLKQFLEIVKRK
MKDLKKANFALSKNSKSDLLGGGAAITRGENGTDPDMQEDNAASVSTKRGSISSEGSGDE
EGDGTASKYKKKHEEEKEYDDEEGDMEQEMEGEWEEIIDSGDEGSGSSKADSPATPEGDG
EEGDGGGGDADDEAMKEDLLTSKPEESSSSSSKKKKRPVNISDREKEQRILAAVNISPMM
EMYDFDADEQSWCEFKFKVELTDNKLDMASLVEAVSRQATVHHVPGIYRCLASGQGSGET
RLLTEGVNLHELYKYDKLLQLNKAYTNDIHAMANVYGIEAACKAIIKEVCDVFSVYGITV
DPRHLSLVADYMTFEGVYRPFNRIGLESNASPLQKMTFESCMKFLREATIQGAKDNLQSP
SARLVVGRVVNGGTGCFDLIQPLM
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaatctagcggccaggaaggatccctcgatgtcgccgtcaagactgaatttgag
gtcaactcaagagacaaggagaatgaagatcagagcatcttgagcactgttccagggaag
actttaccggagaaactgcagaatgctctgacccaacttcagacccatgttaactgtgtc
attgacagtgaccttgacaaggtttctaccgataaagcaccaggcatcaaacagcttctt
gagaggaaagagggtctcttcaggaagcacatgatgggcaaacgtgtcaactacgcggct
cgttccgtcatctcacccgatccttacatcaacacggatgaaataggtatcccagaggtc
attgcaaagcgtctgacgtacccccagcccgtgaccgactggaacgcccaggaactcaga
cagatggttatgaacggacctgatgttcatcctggagctttactgattgagaatgaggat
gggtcgcaggtcaaactacgagcagataaccaatcgcagagagaatcggttgctaagaga
ctgcttacacctagtaacttcaataaacaaaacattggatcaaagaaggttcatagacac
cttcagaccggcgatatagtgttactgaatcgtcagccaacactacacaaaccaggcatc
atggctcataaggtcagagttcttcctggggagaagacgctgcgtttacactactcatca
tgtaagacgtacaacgctgactttgatggagacgagatgaatgtgcactttcctcagaat
gaactaggcagagcagaggcgcttaccatcgtgagcaccaatcatcagtatcttgttcct
aaggatggcacccctctaggaggtcttattcaggatcatatcgtcgctggagtcaggatg
acggtcagaggtagattctttacaaggcttgaataccaacagctagtttactgctcactc
actgataaagagggtcctgtcaagtgccttcctccgtgtatgataaagcccaccctctta
tggtcgaggaaactgnnatctctcgtcatcatcaacaccataccagagggatgtaaaccg
cttgactttgtcgggaaatccaagatcacaaataaggcctggataaaaggcaagccacac
aaacccaaagcaggtggcagcgccctcgttggtcttgacatgtgcgagtctgaggtcata
gtacgagcaggggagcttctctctggtgtgctggacaagggtaactatggacctacacca
tatggcctggtccactgtatctatgagctttatggaggtcacatagctggtaaactactg
agtcattttggacgtctcttcacaacgttcttacaacagcacaccggatttacgctagga
ccagaggatatcattgtcacagaaaaggctgatgaggaccgtcgtgaaacactggatcaa
actaaagactgtggatcagaggctgttgctaaggcattgggtgtagaggaattcaccggt
gtccatgccaacaaacttgcaaagaaatatgaagatgcccacagaaagcctgatgggaac
gatttgaaggagattgatagagagatgaaaacaaagacagaccatttcagtaatcatgtc
ggtaatacctgcctggggtctgggctgctcaagcatttccctgaaaacaatcttcagctg
gtagtcctgtctggtgctaagggatctgtggtgaactgtcttcagatctcctgtctgctt
ggtcagattgagttagaaggacgtcgtccacccctgatggtcagcggtcgttctttacca
tccttcctcccatatgataccagtcctaggtccggtggttatgtggccggtcggttcctg
acagggatcaaacctcaggagtacttcttccattgcatggcaggtagagagggtctggta
gacacagcagttaagactagtcggagtggatacctacagagatgtatcatcaaacatctt
gaaggattggtcgtcaactatgatcaaacggtaagagatagtgatggcagtatagtccag
ttccagtatggtgaagatggtctagatatatccaagactccgttcctacacaaggaacag
tttccattccttttacagaactccaaagcacatctcccatcaaggacaaagaactctaga
ctgtccagtgacccaagccaagccgagaaactcttcagaaagatcaagagatggaaagag
aagcattcccatcgtccccgatccgagagaagatctccattcctggagttctgcaacaag
gaatatgcagccatcttagaacagattcagtctgatgaagacgatgtattgagggcttat
aacaaggctaagaaagagatcattaggagatggagggaggtcactgataagcataggtat
gagaagaagacgactccttgtcccgaccctgtaagtactcagatgagaccggacagacat
cttggtgcaatctcagagaaactagagattctcatccatgactatctagactccaggtta
ccaacatcaaaggatatagatgggactgatgatgaaaccaagctgaagagtttgatgtat
agcaagtatcagagagcgctctgtgagccgggggaagcagtgggtctccttgcagcccag
tctattggagagccttcaactcagatgacactgaatacgtttcattttgctggtcgtggt
gacatgaatgtaacactgggtattcccaggctcagggagattcttatggtagctagtgcc
aatatcaagacacctagtatgacaataccattcatcaatcctgaaatatcggctaagaag
attggcaggatacggaggcaactcggtagagttcatctatctaatgtgcttgaagatata
ggcatctgggaaacctacgagttccccacagcacatgatcattatcgggtttacaggatc
agactcaacttcttgcctcatgtagattataaggatgatcacaatgcaacaccatcaagc
atcttgtcttacatcgaaacaacgttcctaaagcagttcttagaaatcgtcaagaggaaa
atgaaggatctcaagaaagcaaactttgcattatccaagaattctaagtctgacttactt
ggagggggtgccgccatcacccgaggtgaaaatggaacagacccagacatgcaggaggac
aatgcagcctctgtatcaacaaagagagggtccatttcatcggaggggagcggagatgag
gagggtgatggtacagcctctaaatacaagaagaagcatgaagaggagaaggagtatgat
gatgaggaaggagatatggaacaagagatggaaggagaatgggaagaaattatagattca
ggtgacgaaggaagcggtagcagtaaagcagatagccctgctactcctgaaggagatgga
gaggagggggatggtggtggtggtgatgccgatgatgaagcgatgaaagaagacttgctc
acatccaagccagaggaatcatcatcatcatcgtctaagaagaagaaacgaccagttaac
atcagtgatagggagaaagaacagagaatactggctgcagtgaacataagtccaatgatg
gagatgtatgactttgatgccgatgaacagtcgtggtgtgaattcaaattcaaggttgag
ctgactgataataaactcgacatggcctcattggtggaggcagtctcaaggcaagccact
gttcatcatgtacctgggatctatcgctgtcttgcatctggtcaagggtctggagagact
agactgctcacggagggagtcaatctacatgaactctacaagtatgacaaactattgcag
ctaaacaaggcttatactaatgacatccatgccatggctaatgtgtatgggatagaagca
gcttgcaaagctatcatcaaggaggtgtgtgatgtgttctcagtatacggcatcacagtg
gaccctcgtcatctctcattggttgcggactatatgacctttgagggcgtctatcgacct
ttcaatcggatcggtctggagtcaaatgcctctccgttacagaaaatgacgtttgagagc
tgtatgaagttccttagagaagctaccatacaaggtgcaaaagacaacctccagtctcca
tcagctaggcttgtagtaggtagagtggtcaacggtggaacagggtgctttgatctcatt
caacctctcatgtag
DBGET
integrated database retrieval system
