Lytechinus pictus (painted urchin): 129273985
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Entry
129273985 CDS
T09066
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2-like
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129273985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpic03021
]
129273985
Enzymes [BR:
lpic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129273985
Transcription machinery [BR:
lpic03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
129273985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
129273985
NCBI-ProteinID:
XP_054766824
LinkDB
All DBs
Position
13:14523058..14555093
Genome browser
AA seq
1119 aa
AA seq
DB search
KQLLEDAVRPHIESFNYMLDDGLAQAVRNINPVEFLLDDERISLSYEDAFIGVPTIARGN
LFASTLKVYPSECRQRGTTYQAPLQARVLWQRSNGDSGSVMRPLGQIPILVKCKNCNLHN
LPPSELVKRKEEGSEMGGYFIANGIEKVIRMLVMPRRNFPLAINRPKWKSRGKGFTEYGV
QMRCVRNDQSIVTITLHYLTTGSIVVSFAYNKEIFFLPLLLVVRALVDISDQHIYDELVK
GKENDTFLVGCVTGMLRQTHTQNLSSQEQALEYIGERFRIKLSVPPWYTNTQTAKFLLQQ
CIGVHLDSNQDKFHTLTFMARKLFAFTQGECAAENADSPMNQEVLLAGHLYLMVLKEKLE
GWLVNLRYAIEKQAKKSRRFVLNDASLNNAASSGPGDLTRKMEYLIATGNLASKTGLGLM
QTSGMAVVADKLNFMRFLSHFRCIHRGSFFAEMRTTSVRKLLPEAWGFLCPVHTPDGAPC
GLMNHLTALCQVVNTQPLTLPLVKTLYALGMTPLDAPLSHPVSSCYEVILDGRVLGYIPQ
DIATQLTSRLKILKVKGQSGVCQTTEIVLVPVSGKGGQYPGLYIFTTPSRLYRPVRNLAL
QETEYIGTFEQVYMDIAVSPAEIHQKTTHLEVNETSILSVSASLTPFSDFNQSPRNMYQC
QMGKQTMGFPSHTLPFRIDHKMYKLQTPQTPMVRPHSYDKYDFDDYPLGTNAVVAVISYT
GYDMEDAMIINKSSLERGFGHASIYKTEEINLRNKLGESRHGRVAAVFGCDITDPGIKGC
IDKDGFPPIGTVLHEGDPYYAYTRLDSGQTKVEKYRGSEVAVVDNVKVTGNDLGNQVCQR
AFIQLRIQRNPIIGDKFSSRHGQKGVCSQRWPTEDMPFTESGMTPDILFNPHGFPSRMTI
GMMIESMAGKSASLHGLCHDATPFTFSEEQPAVDYFGKLLTAGGYNYYGTERMYSGTSGV
ELEADIFIGVVYYQRLRHMVSDKFQVRSTGPVDILTHQPVKGRKRAGGIRFGEMERDSLL
AHGTSFLLQDRLLNCSDKSLTRICTKCGTLLGIHLEKLSDRSSDGKMDLQDMLSSAQRKW
VCASCDTSDSIETITVPYVFQYLVAELSAMNIKATLEVK
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
aaacagctcctagaagatgcagtgcgccctcacattgaatccttcaattacatgcttgac
gatggattagcacaggcagtgaggaacatcaatccagtggagttcctattggatgatgaa
agaatttcactttcatatgaggatgcattcattggtgtaccaaccattgcaagaggaaac
ctgtttgcttctactcttaaagtctacccatcagagtgtcgacagcgtgggacaacgtac
caggcccctcttcaggcaagggtgctctggcaacgaagcaatggggacagtgggagtgtc
atgcgtcctctgggccagatacccatccttgtaaaatgtaagaattgcaatcttcataac
ctacctcccagtgagcttgtaaaaaggaaagaagagggctctgaaatgggaggttatttc
atcgctaacggcatcgagaaggtcatcagaatgctcgtcatgccaagaagaaattttcca
ctggccatcaaccgtccaaaatggaagagcagaggaaaaggtttcacggagtatggtgtc
cagatgagatgtgtccgcaatgaccagtccatagttacaattacccttcattacctgacc
acagggagcatagtagtgagctttgcttacaacaaggaaatcttcttccttccattactt
ctagttgtcagggctcttgtagatatctctgaccagcatatatatgatgagcttgtcaaa
ggaaaggaaaatgacacattcttagtaggttgcgtgacaggtatgttgcgacaaacacac
acccagaacctgtccagccaggagcaagctttggagtacatcggcgagcgattccgcatc
aagctgtccgtccctccatggtacaccaacacccagacggccaagttcctccttcagcag
tgtatcggcgttcatctggattctaatcaggataaattccacacactcacattcatggcc
aggaagttatttgccttcacccagggagagtgtgcagcggagaatgcagacagtccgatg
aaccaggaagtacttctagcaggtcatctctatctcatggttctcaaggagaaactagaa
ggctggctagttaatctacgctatgccattgagaaacaggccaagaagtcgaggagattt
gttctgaatgatgcatcactgaacaatgctgcgtcatcagggcccggtgatctgacaaga
aaaatggaatacctcattgcaacaggaaaccttgcttctaagacgggcctcggcttaatg
cagacttcaggtatggcagtcgttgctgataaactcaacttcatgaggttcctgtctcat
ttccgttgtattcatcgaggttcattctttgctgagatgaggaccacgtctgtcagaaaa
cttctccctgaggcttggggtttcctatgccctgtccatactcctgatggtgctccttgc
ggtctaatgaatcatctcacagcgctatgtcaggtggtgaacacccaaccccttaccctc
cccctcgtcaagaccctctacgccctgggcatgacccccctcgatgcacccctatcacac
cccgtctccagctgctatgaagtcatcctagatgggagggtccttggctatataccccag
gacattgccacacagctcacctcaaggctcaagattcttaaggtcaaaggtcaaagtgga
gtttgccagactacagagattgtcctggtccctgtgagcggtaagggaggccagtatccc
ggtctctacatcttcaccacaccctcaaggctctaccgacccgtcaggaatctagcctta
caggagacggagtacatcggtacgtttgagcaggtctacatggacatcgcagtcagtccg
gctgaaattcaccaaaagaccacacatttagaagtgaatgagacgagtatactgagtgtt
tcggcgagcctcacaccgttctctgatttcaaccaaagccctagaaatatgtaccaatgt
cagatgggtaagcaaacgatgggtttcccgtcccacacactgccattccgtattgatcat
aagatgtacaagctacagacgcctcagacaccgatggtccgaccacactcttatgacaag
tatgattttgatgattacccactaggaaccaatgctgtagtagctgtcatctcatataca
gggtatgatatggaagatgccatgatcataaacaagtcgtcactggaaagagggtttgga
catgctagcatctataaaacagaagagattaaccttaggaataagcttggagaatcaagg
cacggaagagtggctgctgtgtttggttgtgatataactgaccctgggatcaaaggatgt
atagataaagatggctttcccccaatcggtacagtactacatgaaggagacccatactat
gcttataccaggcttgattcaggtcagaccaaggtcgagaagtacagagggtctgaggtc
gcggtggtagataatgtcaaggtcacagggaatgaccttggtaaccaagtctgtcagaga
gcgttcatacaacttagaatacagaggaatccaatcattggggacaagttttctagtcgt
catggtcagaagggtgtatgcagtcagcgatggccgacggaagatatgcctttcactgag
agcgggatgacgcccgatatcttattcaaccctcatggattcccttctcgtatgacaatc
ggtatgatgatagagagtatggcaggcaagtcagcgtcccttcacggtctatgtcatgat
gctacgccctttacattctcagaagaacaacctgctgtggattactttggcaagcttcta
actgctggagggtataactactatggaacagagagaatgtatagcgggacatcaggggtg
gagcttgaagctgatatattcataggcgtggtctactatcagaggctaaggcatatggta
tctgataaattccaggtgaggtcgaccggaccggtggatatcttaacccaccaaccggtg
aaaggaaggaagagggctggaggtatacgctttggtgagatggagagggactcacttcta
gctcatggaacgtcgttccttcttcaggatagactgctcaactgctcagataaaagcttg
acgaggatatgcaccaagtgcggaacactccttggcattcacctggagaagcttagtgac
cggtcatcggacggaaagatggaccttcaagacatgctgtccagtgcccagaggaagtgg
gtctgtgcgtcgtgtgatacctcagacagcattgaaaccatcaccgtgccgtatgtcttc
caatacctggtggctgaacttagcgccatgaatatcaaggcaacactggaagtgaagtga
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