Lytechinus pictus (painted urchin): 129275014
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Entry
129275014 CDS
T09066
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2-like isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129275014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpic03021
]
129275014
Enzymes [BR:
lpic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129275014
Transcription machinery [BR:
lpic03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
129275014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
129275014
NCBI-ProteinID:
XP_054767756
LinkDB
All DBs
Position
13:complement(14572027..14615628)
Genome browser
AA seq
1141 aa
AA seq
DB search
MSDTPTYRNLTNGEYGRPKEFQNKLLEDAVRPHIESFNYMLDDGLAQAVRNINPVEFLLD
DERISLSYEDAFIGVPTIARGNLFASTLKVYPSECRQRGTTYQAPLQARVLWQRSNGDSG
SVMRPLGQIPILVKCKNCNLHNLPPSELVKRKEEGSEMGGYFIANGIEKVIRMLVMPRRN
FPLAINRPKWKSRGKGFTEFGVQMRCVRNDQSIVTITLHYLTTGSIVVSFAYNKEIFFLP
LLLVVRALVDISDQHIYDELVKGKENDTFLVGCVTGMLRQTHTQNLSSQEQALEYIGERF
RIKLSVPPWYTNAQTAKFLLQQCICVHLDSNQDKFHTLTFMARKLFAFTQGECAAENADS
PMNQEVLLAGHLYLMVLKEKLEGWLVNLRYAIEKQARKSRRFVLNDVSLNNAASSGPGDL
TRKMEYLIATGNLASKTGLGLMQTSGMTVVADKLNFMRFLSHFRCIHRGSFFAEMRTTSV
RKLLPEAWGFLCPVHTPDGAPCGLMNHLTALCQVVNTQPLTLPLVKTLYALGMTPLDAPL
SHPVSSCYEVILDGRVLGYVPQDIATQLTSRLKILKVKGQSGVCQTTEIVLVPVSGKGGQ
YPGLYIFTTPSRLYRPVRNLALQETEYIGTFEQVYMDIAVSPAEIHQKTTHLEVNETSIL
SVSASLTPFSDFNQSPRNMYQCQMGKQTMGFPSHTLPFRIDHKMYKLQTPQTPMVRPHSY
DKYDFDDYPLGTNAVVAVISYTGYDMEDAMIINKSSLERGFGHASIYKTEEINLRNKLGE
SRHGRVAAVFGCDITDPRIKGCIDKDGFPPIGTVLNEGDPYYAYTRLDSGQTKVEKYRGS
EVAVVDNVKVTGNDLGNQVCQRAFIQLRIQRNPIIGDKFSSRHGQKGVCSQRWPTEDMPF
TESGMTPDILFNPHGFPSRMTIGMMIESMAGKSASLHGLCHDATPFTFSEEQPAVDYFGK
LLTAGGYNYYGTERMYSGTSGVELEADIFIGVVYYQRLRHMVSDKFQVRSTGPVDILTHQ
PVKGRKRAGGIRFGEMERDSLLAHGTSFLLQDRLLNCSDKSLTRICTKCGTLLGIHLEKL
SDRSSDGKMDLQDMLSSAQRKWVCASCDTSDSIETITVPYVFQYLVAELSAMNIKATLEV
K
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatacaccaacttaccgtaatttaacaaatggagaatatgggagaccgaaagag
ttccagaacaagctcctagaagatgcagtgcgccctcacattgaatccttcaattacatg
cttgacgatggattagcacaggcagtgaggaacatcaatccagtggagttcctactggat
gatgaaagaatttcactttcatatgaggatgcattcattggtgtaccaaccattgcaaga
ggaaacctgttcgcttctactcttaaagtctacccatcagagtgtcgacagcgtgggacg
acgtaccaggcccctcttcaggcaagggtgctctggcaacgaagcaatggggacagtggg
agtgtcatgcgtcctctgggccagatacccatccttgtaaaatgtaagaattgcaatctt
cataacctacctcccagtgagcttgtaaaaaggaaagaagagggctctgaaatgggaggt
tatttcatcgctaacggcatcgagaaggtcatcagaatgctcgtcatgccaagaagaaat
tttccactggccatcaaccgtccaaaatggaagagcagaggaaaaggtttcacggagttt
ggtgtccagatgagatgtgtccgcaatgaccagtccatagttacaattacccttcattac
ctgaccacagggagcatcgtagtgagctttgcttacaacaaggaaatcttcttccttcca
ttacttctagttgtcagggctcttgtagatatctctgaccagcatatatatgatgagctt
gtcaaaggaaaggaaaatgacacattcttagtaggttgcgtgacaggtatgttgcgacaa
acgcacacccagaacctgtccagccaggagcaagctttggagtacatcggagagcgattc
cgcatcaagctgtccgtccctccatggtacaccaacgcccagacggccaagttcctactt
cagcagtgtatctgcgttcatctggattctaatcaggataaattccacacactcacattc
atggccaggaagttatttgccttcacccagggagagtgtgcagcggagaatgcagacagt
ccgatgaaccaggaagtacttctagcaggccacctctatctcatggttctcaaggagaaa
ctagaaggctggttagttaatctacgctatgccattgagaaacaggccaggaagtcaagg
agattcgttctgaatgatgtatcactgaacaatgctgcatcatcagggcccggtgatctg
acaagaaaaatggaatacctcatagcaacaggaaaccttgcttctaagacgggcctcggc
ttaatgcagacgtcaggtatgacagtcgttgcggataaactcaatttcatgaggtttctg
tctcatttccgttgtattcatcgaggttcattctttgctgagatgaggaccacatctgtc
agaaaacttctccctgaggcttggggtttcctatgccctgttcatactcctgatggtgca
ccttgtggtctaatgaatcatctcacagcgttatgtcaggtggtcaatacccaacccctg
accctccccctcgtcaagaccctctacgccctgggcatgacccccctcgacgcaccccta
tcgcaccccgtctctagctgctatgaagtcatcctagatgggagggtcctgggctatgta
ccccaggacatcgccacacagctcacctcaaggctcaagattcttaaggtcaaaggtcaa
agtggagtttgccagactacagagattgtcctggtccctgtgagcggtaagggaggtcag
tatcccggtctctacatcttcaccacaccctcaaggctctaccgacccgtcaggaatcta
gccttacaggagacggagtacatcggtacgtttgagcaggtctacatggacattgcagtc
agtccggctgaaattcaccaaaagaccacacatttggaagtgaacgagacgagcatactg
agtgtttcagcgagcctcacaccgttctcagatttcaaccaaagccctagaaatatgtac
caatgtcagatgggtaaacaaacgatgggtttcccatcccacacactgccattccgtatt
gatcataagatgtacaagctacagacgcctcagacaccgatggtccgaccacactcttat
gacaagtatgattttgatgattacccacttggaaccaatgctgtagtagctgtcatctca
tatacagggtatgatatggaagatgccatgatcataaacaagtcttcactggaaagaggg
tttggtcatgccagcatctataaaacagaagagattaatcttaggaataagcttggagag
tcaaggcacggaagagtggctgctgtgtttggttgtgatataactgaccctcgaatcaaa
ggatgtatagacaaagatggctttccccctatcggtacagtactaaatgaaggagaccca
tactatgcttacaccaggcttgattcaggtcagaccaaggtcgagaagtacagagggtct
gaggtcgcggtggtagataatgtcaaggtcacagggaatgaccttggtaaccaagtctgt
cagagagcgttcatacaacttagaatacagaggaatcctatcattggggacaagttttct
agtcgtcatggtcagaaaggtgtatgcagtcaacgatggccgacggaagatatgcctttc
actgagagcgggatgacacccgatatcttattcaaccctcatggattcccttctcgtatg
acaatcggtatgatgatagagagtatggcaggcaagtcagcgtcccttcacggtctatgt
catgatgctacgcccttcacattctcagaagaacaacctgctgtggattactttggcaag
cttctaactgctggagggtataactactatggaacagagagaatgtatagcgggacatca
ggggtggagcttgaagctgatatattcataggcgtggtctactatcagaggctaaggcat
atggtatctgataaatttcaggtgaggtcgaccggcccggtggatatcttaacccaccaa
ccggtgaaaggaaggaagagggctggaggtatacgctttggtgagatggagagggactca
cttctagctcatggaacatcgttccttcttcaggatagactgctcaactgctctgataaa
agcttgacgaggatatgcaccaagtgcgggacactccttggcatccacctggagaagctc
agcgaccggtcatcggacggaaagatggacctccaagacatgctgtccagtgcccagagg
aagtgggtctgtgcgtcgtgtgatacctcagatagcattgaaaccatcaccgtgccatat
gtcttccaatacctggttgctgaacttagcgccatgaatatcaaggcaacactggaagtg
aagtga
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