Lytechinus pictus (painted urchin): 129277230
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Entry
129277230 CDS
T09066
Name
(RefSeq) neurogenic locus notch homolog protein 1-like
KO
K02599
Notch 1
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
129277230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
Ank
Notch
Ank_4
Ank_3
Ank_5
EGF_2
NODP
EGF_3
NOD
Motif
Other DBs
NCBI-GeneID:
129277230
NCBI-ProteinID:
XP_054769411
LinkDB
All DBs
Position
15:complement(11728518..11808299)
Genome browser
AA seq
2504 aa
AA seq
DB search
MGEKQKQNIKVHVEDVQIPKSCFLIKAVLLSHCSCERTHVGDRCQFENPCYHAEICQNDG
ECEVLFNSDGSNPYFHCNCPLGYELSLCEGEVDNVCKLEEPCQNGGTCRLTTSLWDYECY
CTPANTGVNCTDDNHCVSNPCLNGAVCTSSSDGYSCECAQGFQGDTCNNDINECTRPNGP
TVCYNGGTCFNQYGGFRCECPLGFTGDQCELIYEPCSPDPCRNGGQCASTGPYTFTCTCQ
NGFTGETCELNLNDCTQHLCSNGGTCIDGVNEYTCSCLKEFTGTYCEMDFDECDTAVDPC
FNGGTCSNTYGNFSCICVRGWEGQTCEVNKDDCTPNPCQFGGECEDRVSSFKCTCPPGRT
GLLCHLEDACMSNPCHHTAQCSTSVVDGSFICDCATGYEGFNCSKDIDECSLSMDSICQS
GGTCQNFDGGWSCLCSSGFTGSRCETDIDECDDDPCYNGGTCLNKRGGYACICLTGFTGT
LCEIDINECSSNPCLNGATCTDATGRFECTCLDGYSGTTCQVNIDDCLPSPCENGGTCID
GVNQFTCLCETGYEGHRCEMDSDECVSRPCMNGGVCEDLIGYYQCDCPVGTSGDNCEYNH
YDCSSNPCVNDGTCVDGINEYTCMCHEGYRGLNCEEDIDDCESHPCHNGGTCVDEVNGYH
CLCPVGYHDPFCMSNINECSSNPCDNGGSCHDGVNEYSCECMAGYTGTRCSDDFDECSSN
PCQHGGTCDNRHAFYNCTCQAGYTGLNCEVNIDDCVDEPCLNGGICIDEVNSFQCVCPQT
FVGLLCETERSPCEDNQCQNGATCVYSEDYAGYSCRCTSGFQGNFCDDDRNECLFSPCRN
GGSCTNLEGSFECSCRPGYDGPICEINIDECASGPCTNGGICTDLIDNYFCSCQRGFTGK
NCQNDTDECLSSPCRNGATCHEYVDSYTCSCLVGFSGMHCEINDQDCTTSSCLYGGTCID
GVNSYTCECVTGYTGSNCQIEINECDSDPCENGATCQDRFGSYSCHCDVGFTGLNCEHLV
QWCSPQNNPCYNGATCVPMGHLYECLCASNWIGKLCDVPKVSCDIAASDKNVTRNELCLN
GGTCIDATSSHSCLCQDGYTGSYCEVNIDECASAPCHNGGTCTDGVYSYTCSCLPGFEGP
RCQQNVNECASSPCHNGGQCHDMVNGYTCSCPAGTQGTDCSINLDDCYEGACYHGGVCID
QVGTYTCDCPLGFVGQHCEGDVNECLSNPCDPVGSQDCIQLINNYQCVCKPGYTGQDCEQ
EIPNCQNDPCQNNGLCLPSDEGYYCDCLRGFTGVHCETKLTPCGTHPCQNEGTCMEYGDD
FDDYTCMCPSGVSGDNCEIDYNECASSPCVNGGTCLDEYGQYHCDCPATWNGRNCHLLDP
TFAGGIGMDPEIPTEPPVTIPPTVPTTTEPPRCSQECLQKKGDYFCDDECNTHLCEWDGK
DCSLNLDPWENCTAVNVPCWNRFGDGRCDRECNNHGCLFDGFDCVDQKPEECGEDALCLE
RYGNGFCDEECNNIGCLYDGLDCEENPEFAHGVLIVDVMIPYAEMLTLNRSQMFLQDMSV
ELNTVVLFAPTTDNKNKIEPWENDPRAVRAPVRRDVLAVSREGKLTVKKRQAELNPDDGT
KCFLLLDNYKCHQDRPGNCFETAADAAAYLAALVASQLLPISLPITGVGSETTPAQTVSP
SVLIAVAIIGAFVIAAACVIARKRFRTNGTWFPSNFVRTSSTKSENPKVTRECPIGNESP
PSTICSSIDPGEDAMNALECRAAKRQRISRLSPVDYGQGHTTLDTDTPWMTMTSNGPLHP
SMALTPPRDQEPPFITNKGPDGLTPLMLAVMRSISSTTDQEEENYAHFIEDLLTRGADIN
HRTETRGETALHLAARYNLPVAARKLLEYSVNTNAEDKMGETPLHAAVRADAIEVFRLLI
QNRSTQIDAKTKAGYTPMIIAVRLMVENMVEELELAGADTAGTDNDGRSALMWAAALNHL
PALEFLLKKGSNKDLQDNQEQTPLFLAAKEGHMGAVKMLLDHGANREITDHLDMSPREIA
NRMSLQDVVRLLDTYSMMSPALTPNSHVTSPMDMHNGELGYSNGAKPKKKRGTNKNGDVR
ERGKEKRKGKKRPSSDESLPPLVPSPPESVESPQGYNRTPPPGAIYSLPVTTQNVMMPQD
HYQMKEVARHGQGPHVVDMHPNTIMNGRLYVPGNNPSPAKGSMGGENMDIPGASDLVSHT
IWSPDHALMQNQRSMHDPNVMVPGTTSQAMAMIRQAPSTQAMQQTLSPEARDSSPKPCTM
VPSPAISNQYMASSPNLPSTTSQATHYARANNPLYAGSPHRGKVPQQMHSMYQSQNRMNP
RACISELPNGHPNSPENCMQEYMIREPELLNPAKQSMYVGNSKMPNGQHRDIISEKTSFS
NPHNNNGSTVDPSCTYTMVTHMPDHSFPTPSPESPSKWSNPSPTSASDWSGSEAISSPPV
PPNQQQVSGQELLNGHGHTGRLLTGHDMPLGISLQGSCTEVAYI
NT seq
7515 nt
NT seq
+upstream
nt +downstream
nt
atgggggaaaaacagaaacagaacatcaaagttcatgttgaagatgttcagattccaaaa
tcatgttttcttattaaagcggtacttctttctcattgcagttgcgaaaggacccacgta
ggggaccggtgccagttcgaaaacccttgctaccatgcagaaatctgccaaaatgatggt
gaatgcgaagtcctgttcaacagcgacgggagtaatccctatttccactgcaattgtcct
ctgggatacgaactgagtctttgcgaaggcgaagtggacaatgtgtgtaagcttgaggag
ccttgccagaatggcggtacctgccgcctcaccacgtcgctgtgggactacgaatgctac
tgcacacctgctaatacaggtgttaattgcacagatgacaatcactgtgttagtaacccg
tgtctgaatggagccgtttgcacatcgtccagtgatggctactcctgtgagtgcgcacaa
ggattccagggtgacacgtgcaacaacgacatcaacgaatgcacaagaccgaatggtccc
acggtctgctacaacggtgggacgtgctttaaccagtacggggggttccggtgcgagtgc
cctttgggattcacaggagaccagtgtgagttgatctacgagccgtgctcgccagacccg
tgtaggaacggaggtcagtgcgcctcaactggaccgtacacctttacctgtacctgccaa
aatggatttaccggagaaacgtgtgaattaaacctgaacgactgcacccagcatctatgc
tcgaatggtgggacatgcatcgatggagtcaatgaatacacatgttcctgcctcaaagag
ttcacaggtacctattgcgagatggattttgatgaatgcgatactgcagttgatccctgt
ttcaacggtggtacttgcagcaacacctatggtaacttctcctgcatatgcgtccgggga
tgggaggggcaaacatgcgaggtcaacaaagacgattgcacccctaacccttgccagttt
ggaggagagtgcgaggacagagtatcatcgttcaagtgtacctgcccgcccggtcgtaca
ggtcttctgtgccatttggaggatgcgtgcatgagcaatccatgccatcacactgcacag
tgctccacctccgtggtggatggttcttttatttgcgattgtgccaccggttacgagggt
ttcaattgctcaaaggatatcgatgaatgcagcctaagcatggattctatatgtcagtcg
ggtggtacgtgtcaaaactttgatggtgggtggagttgcttatgtagctctggctttact
ggatcccgctgcgaaacggatattgacgagtgtgacgacgacccatgctacaatggagga
acgtgcttaaataaaaggggtggctatgcgtgtatctgtctcacaggtttcaccggcact
ttatgtgagattgatatcaacgaatgctccagcaacccttgtctgaatggggcaacgtgc
accgacgccactggaaggtttgaatgtacgtgcctggacgggtactccgggaccacttgc
caggtgaacattgacgactgtctaccgtcgccctgcgagaacggcggaacctgcatcgat
ggggtcaatcaattcacttgtctgtgcgagacaggttatgagggtcatcgatgtgaaatg
gacagtgatgaatgcgtaagcagaccctgtatgaatggtggagtatgtgaagatctaatc
ggttattaccaatgcgattgcccagtcggcacctcaggagacaattgtgagtacaaccac
tatgactgcagttccaacccctgcgtcaatgacggcacgtgtgtggacggcatcaacgag
tacacttgcatgtgtcatgaaggctacagaggactgaattgtgaggaggatatcgacgac
tgcgagtctcacccctgtcacaatggaggtacgtgcgtggacgaagtcaacgggtatcac
tgtctatgtcctgtcggctatcacgacccattctgcatgtccaacatcaacgagtgctcc
agcaatccttgcgataacggcggatcctgccatgatggtgtcaatgaatacagctgcgaa
tgtatggccgggtacaccggtacccggtgttcggatgacttcgacgagtgctcctccaac
ccgtgccagcacggcggtacctgcgacaatagacacgctttctacaactgcacttgccag
gcaggctacacgggcctcaattgcgaggtgaacattgacgactgtgtcgacgagccctgc
ctgaacggtggaatttgcattgacgaggtgaattctttccagtgcgtgtgtccgcagaca
ttcgtcggactcctgtgtgagacggaacggtcgccctgcgaagacaatcagtgtcagaat
ggagctacttgtgtgtactcggaagactatgcaggatactcttgtagatgcaccagtggt
ttccaaggcaacttttgtgatgatgaccgcaacgagtgcctcttctccccctgtcgcaat
ggaggctcttgcacgaaccttgaaggatccttcgagtgctcctgtcgtccgggttatgat
ggacccatctgtgagatcaacatagacgagtgtgcttcgggaccctgcaccaatggtgga
atctgcacggacctcatcgacaactacttctgctcctgtcagcggggattcacaggcaag
aactgccagaatgacaccgatgaatgcctcagttcgccttgcaggaacggcgccacctgt
catgaatatgtagacagctacacgtgttcttgccttgttggcttcagtggcatgcattgc
gagattaacgatcaagattgtacaactagctcttgtctctatggtggtacctgcatcgac
ggtgtcaacagctacacctgcgagtgcgttaccggttacactggctccaactgccagatt
gagatcaacgaatgtgattcggacccctgtgagaacggggccacctgccaagatcggttt
ggttcctattcgtgccactgtgatgtgggtttcactggcctgaactgcgagcatttggtt
caatggtgcagccctcagaacaatccatgctacaacggagctacctgcgttccaatgggc
cacctttacgagtgcctctgtgcctccaactggatcggaaagctctgcgatgtccccaag
gtgtcctgtgatattgcagcctcggataaaaatgtaactcggaatgaactttgtttgaat
ggaggaacatgcatcgatgcaacaagcagtcattcctgcctttgccaagacggctacaca
ggatcctactgtgaagtgaatattgacgagtgtgcttcggctccatgccacaacggtggt
acgtgcacagacggagtgtacagctacacttgctcatgcctgcctgggttcgagggtccg
cgatgccaacagaacgtcaatgaatgtgcttccagcccctgtcacaatggcggtcagtgc
cacgacatggtcaatggctacacctgctcatgtccggctggaacccaaggcacggactgc
tccatcaacttggacgactgctacgaaggagcatgctaccacgggggagtctgcattgac
caagtaggcacgtacacctgcgattgcccccttgggtttgtcggccagcactgcgaaggc
gacgtgaacgagtgcctatctaacccttgcgatcctgttggaagccaagactgcattcaa
cttatcaacaattaccagtgtgtctgcaagcctggttatactggccaagactgtgagcaa
gagattcccaactgtcagaatgatccttgtcagaacaacggactttgcttaccaagtgat
gaaggctattactgcgactgcctcagagggttcaccggtgtccattgtgaaacaaagctc
acaccttgtggcacacacccttgccagaatgaaggcacctgcatggaatatggcgatgac
tttgacgactacacctgcatgtgcccctctggtgtcagcggcgacaactgtgagattgac
tacaacgagtgtgcttcctcgccctgtgtcaatggaggcacctgtctagacgagtatggt
cagtatcactgtgactgcccagcaacatggaatggtcgcaactgccacctgttagatcca
acattcgcaggaggcattggcatggacccagagatcccaaccgaacctccggtgacgatt
cctcccactgtgccgacaaccacagaaccacctaggtgctctcaggaatgccttcagaag
aagggtgactacttttgtgatgatgaatgcaacactcatctatgtgagtgggatggcaag
gactgctccttgaacctagacccatgggagaactgcaccgctgtcaacgttccatgctgg
aaccgatttggagatggcaggtgcgacagggaatgcaacaaccatggctgcctctttgat
ggttttgactgcgtagatcagaagccagaggagtgtggggaggatgcactctgtctcgag
cgctacgggaatggattctgcgatgaggaatgtaataacattggttgtctgtacgatggg
ctagattgcgaagagaacccagagtttgcccacggtgttcttatagtcgatgttatgatc
ccctatgcggagatgctcaccctcaaccgctcccaaatgttcctgcaagacatgagcgtt
gagctgaataccgtcgtcctcttcgccccgacgactgacaacaagaacaagattgagccc
tgggagaatgacccgagggccgtccgagcacccgtcaggagagatgttctggccgtgagc
agggaaggcaagctgactgtcaagaagaggcaggccgagttgaatccagatgatggcacg
aagtgcttcctgttgcttgataactacaagtgccatcaggatcggcccggcaactgcttt
gaaactgcagcagatgcagctgcatacctggcagcattggtcgccagccagctcctccct
ataagtctacccattactggagttggaagtgaaactactcccgctcagacggtcagcccg
agtgttctcatagccgttgccattatcggagcctttgtgattgccgctgcgtgcgtgatc
gcgaggaagcggttccgaacaaacggcacatggtttcccagcaactttgtccgcacttcc
tcaaccaagtccgaaaatcccaaggtcacccgggagtgtccgatcggcaacgagtcgcct
ccatctaccatctgctcttctattgatcctggtgaagatgccatgaatgcgttagaatgc
agagctgccaagagacaaagaatctctaggcttagtcccgtagactatggtcagggccat
accaccttagatacggacactccttggatgacaatgacaagtaatgggccgctccatccc
tccatggctctgacacctcctcgggaccaggaacccccgttcatcaccaacaagggcccc
gacggtctgacccccctcatgctggccgttatgcgttcgatatcgagcaccaccgaccag
gaagaggaaaattacgcccacttcattgaggacctcctcaccagaggagcggacatcaat
caccggacggagacaagaggcgagactgcccttcacctggcagcgcggtacaacctcccg
gttgctgccaggaagctcctggagtattcggtgaacaccaacgctgaagacaaaatggga
gagacaccgctgcacgctgctgtcagagctgatgccattgaggttttcaggctgctgatc
cagaacagatctactcagatcgacgccaagaccaaggctggctacaccccgatgatcatc
gctgtccggctaatggtcgaaaacatggtggaagaacttgaactggctggcgccgacact
gcagggacagataacgatggtcggtctgcactgatgtgggctgcagctctcaatcaccta
cctgccttagagttcctcctcaagaagggttccaacaaggatctgcaagacaatcaggaa
caaacgcccctgttccttgctgccaaagagggccatatgggggcagtgaaaatgctcctg
gatcacggagcaaaccgggagattacagatcatctggatatgtctccgagagagatcgcc
aatagaatgagccttcaggatgttgtccgactcctggacacctacagtatgatgagtcct
gctctcacaccaaacagccacgtcaccagtcccatggacatgcataacggagagttgggc
tattccaacggagccaaaccaaagaagaaacggggcacgaataaaaacggtgatgtgcgg
gagcgcgggaaggagaaaagaaaggggaagaagcggccaagttcggacgagtctttgccg
ccgctggtaccgtcgcctccagaatcggtagaatcgcctcaaggttataatagaactcca
cctcccggagctatttattcattgcctgtgacgacgcagaacgtgatgatgccgcaggat
cattatcagatgaaggaagttgcgaggcatgggcaaggaccacacgttgtagacatgcat
ccaaacacgatcatgaatggtagattgtatgtccctgggaacaaccccagcccagccaag
gggtcgatgggaggagagaatatggacattccaggagcttctgatttggtctcacatacc
atctggtctccagaccatgcactaatgcaaaaccagagatcgatgcacgacccaaatgtt
atggttccggggactacgtcacaggccatggccatgatcaggcaagctccaagcacacag
gccatgcaacagaccttgagtccagaggcccgcgactctagcccaaaaccttgcaccatg
gtacctagtcccgcaatctccaaccaatacatggcttccagccctaatctcccctctaca
accagtcaagcaactcattatgccagggccaacaaccccttgtacgccggcagcccccac
cggggcaaagtacctcagcaaatgcacagcatgtatcaaagccaaaataggatgaaccct
cgtgcatgtatcagtgaactgccgaatggtcaccccaactcacctgaaaactgtatgcaa
gagtacatgataagagagcctgaactcttaaaccctgccaaacagagcatgtacgtgggg
aacagcaagatgccaaatggccagcacagagacatcatatcagagaagacctccttctca
aatcctcacaataacaatgggagcacagtggacccttcctgtacatacaccatggtaact
cacatgcctgatcactccttcccaacaccttcgccggaatcacccagcaagtggtccaat
ccatctccgacctctgcatcggattggtcggggtcggaggccatctcaagcccgccagtg
cccccaaaccagcagcaggtcagcggtcaagagctgctgaacgggcatgggcataccggt
aggttactgactggacatgatatgccactcggtatctctttgcaaggaagctgcactgag
gtcgcgtatatctga
DBGET
integrated database retrieval system
