Limnochorda pilosa: LIP_0492
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Entry
LIP_0492 CDS
T04150
Name
(GenBank) hypothetical protein
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
lpil
Limnochorda pilosa
Pathway
lpil00240
Pyrimidine metabolism
lpil01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lpil00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LIP_0492
Enzymes [BR:
lpil01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
LIP_0492
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
PfkB
Motif
Other DBs
NCBI-ProteinID:
BAS26349
UniProt:
A0A0K2SHP2
LinkDB
All DBs
Position
complement(514242..514910)
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AA seq
222 aa
AA seq
DB search
MDISSDLVALSRYDVMVVCSGVKSFLDIGRSLELLETLGVPVLRYGTGDFPGFFVRSTGF
PVPYRVDAPEEVVAFARLKWGEGWRGGILVANPVPREEAGDDALIARAIEEAQRLAMERG
VSAGRSRNVGASDRPRAPAPPGHVVSFVDAQGERTMFSYGGAAATPLELTESRRAAIAGA
SLLFLSGYGLRAPDQAASYLAAARLAREHGMPVAFDPSPAWA
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggacatctcctcggacctggtggcgctctcccgctacgacgtgatggtggtgtgcagc
ggcgtgaagtcgttcctggacatcgggcgatcgctggagctcctggagacgctgggggtg
ccggtgcttcggtacggaacaggcgacttcccagggttcttcgtccggagcacgggcttc
ccggtgccctaccgggtcgacgcccccgaagaggtggtcgccttcgcccggctcaagtgg
ggggagggctggcggggcgggatcctcgtcgccaacccggtgccccgggaagaggccggg
gacgacgcgctcatcgcccgcgccatcgaggaggcccagcggctggcgatggaacggggc
gtgagcgccgggaggagccgtaacgtgggcgcgagcgaccgcccgcgagcgcctgcgcca
ccggggcacgtggtctccttcgtagacgcgcagggcgagcggaccatgttctcgtatggc
ggggcggccgcgacaccgctggagctcaccgaatcccggagggcggccatcgccggcgca
tcgctcctcttcctctcggggtacggccttcgggccccagaccaggccgcctcctatctg
gccgcggcgcggctcgcccgggagcacggcatgcccgtcgccttcgacccttcgcccgcc
tgggcgtga
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