Leclercia pneumoniae: KQ929_08995
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Entry
KQ929_08995 CDS
T08189
Symbol
pdeR
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
lpnu
Leclercia pneumoniae
Pathway
lpnu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lpnu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KQ929_08995 (pdeR)
Enzymes [BR:
lpnu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
KQ929_08995 (pdeR)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
GGDEF_2
PAS_10
Motif
Other DBs
NCBI-ProteinID:
QWW81316
LinkDB
All DBs
Position
complement(1826113..1828104)
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AA seq
663 aa
AA seq
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MIDDLEQNLLFRYMGTLSPWWRLTADSNALHLAASESSDTTQVVALTDEQADSIREMTVI
TSSITMTLSLYGTDVPVHLVGRKINKKEWAGTASAWNDTPSVARDLAQGLSFAEQVVSEA
NSVIVILDRHGNIQRFNRLSEEYTGLKEQEVIGQNVFKLFMSRSEAAASRRNISGFFRNG
SSYEVERWIKTRKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRVLANTD
TITGLPNRNAIHEMISDAIAQRGEGQVGVVYLDLDNFKKVNDAYGHMFGDQLLQAVALAI
LSCLEEGQVLARLGGDEFIVLATDTSQSSLEAMASRILTRLRQPFRIGLIEVYTGCSLGI
SLAPQHGTDRESVIRNADTAMYTAKESGRGKFTVFSPEMNQRVFEYLWLDTNLRKALDND
QLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPMEFISYAEESGLIVPLGRWVMLDVV
RQVAKWRDKGINLRVAVNVSARQLADQTIFSDLKQALKDLNFEYCPIDVELTESCLIENE
ELALSVIQQFSKLGSQIHLDDFGTGYSSLSQLARFPIDAIKLDQAFVRDIHKQSVSQSLV
RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGVNERQGFHFAKPMPATAFERWFKRYQSR
NAR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgattgacgatctggagcaaaatttgctgtttcgttatatgggcaccctcagtccctgg
tggcgcctgacagccgacagtaacgcgctccatcttgctgccagcgagagttccgatacc
acgcaggtggtcgccctgacggatgaacaggccgacagcattcgcgagatgaccgttatt
acctccagcattaccatgacactttcgctctatggcaccgacgtcccggtgcatctggtt
ggccgtaaaatcaataaaaaagagtgggctggcaccgcctctgcctggaatgacacccct
tccgttgcgcgggatctggcccaggggctctcttttgccgagcaggtggtttctgaagcc
aactccgtgattgtcattctcgaccgacacggcaatattcagcgtttcaatcgtctgagc
gaagagtataccggcctgaaagagcaggaagtcatcggccagaacgtctttaaactcttt
atgagtcgcagcgaagcggctgcctcccggcgtaatatcagcggtttttttcgtaacggc
agctcctatgaggtggaacgctggatcaagacccgcaaaggtcagcgcctgtttctcttt
cgtaataaattcgtccatagcggtagcggaaaaaatgagatcttcttgatctgctcaggc
acggatattacggaggagcgccgcgcccaggaacgactgcgcgtgctggcgaataccgat
accattacgggcctgcctaaccgaaacgccatccatgaaatgatcagcgatgctattgcg
cagcgcggagagggtcaggtgggcgtggtctatctcgacctggataatttcaaaaaggtg
aacgatgcctacgggcacatgtttggcgatcagctcctacaggccgtcgcgctggcgatt
ttgagctgccttgaagaggggcaggttcttgcgcgcctgggtggggatgagtttattgtt
ctggcgactgacacctcccaaagctcgctggaggcgatggcctcacgcattttaacccgc
ctgcggcagccctttcgcatcggtctcatcgaagtctacacgggttgctcactgggtatt
tcccttgcgcctcagcacggcaccgatcgcgagagcgtgatccgtaacgccgatacagcg
atgtacaccgccaaagagagtggccgcggtaaatttacggtcttctcaccagagatgaat
cagcgcgtatttgagtacctgtggctggataccaacctgcgtaaagcgctcgataatgac
cagttagtgatccactaccagcccaagattacctggcgcggagaagtccggagcctggag
gcgctggtgcgttggcaatcgcccgaacgcgggctgatccctcccatggagtttatctcc
tacgcggaagagtccgggctcattgtgcctctcgggcgctgggtgatgctcgatgtggtg
cgccaggtggccaagtggcgtgataagggaatcaacttacgggtggcggttaacgtctca
gcgcggcagctcgcggatcagaccattttcagcgatctgaaacaggccctgaaagatttg
aatttcgaatactgtccgattgatgtagaactcaccgaaagttgcctgattgagaatgaa
gagctggcgttgtcagtgatccaacaattcagcaagctgggatcgcaaattcatctggat
gactttggtactggatactcatccctctctcagctggcgcgttttcccattgacgctatc
aagctcgaccaggcctttgtgcgggatattcataaacagtccgtctctcaatcgctggtg
cgtgccattgtggccgtggcgcaggccctgaatctgcaggtgatcgctgaaggggtggag
agtgcgaaagaagacgcctttctgacaaagaatggcgtcaatgaacgacagggatttcat
tttgctaaacctatgcccgcgactgccttcgagcgttggtttaaacgctaccagtcacgc
aatgcccgctag
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