Limulus polyphemus (Atlantic horseshoe crab): 106459600
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Entry
106459600 CDS
T08968
Name
(RefSeq) protein CLP1 homolog isoform X1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106459600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpol03019
]
106459600
Enzymes [BR:
lpol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
106459600
Messenger RNA biogenesis [BR:
lpol03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
106459600
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
CTV_P13
MMR_HSR1
PduV-EutP
CbiA
nSTAND3
AAA_22
ATP_bind_1
AAA_24
AAA_16
AAA_35
AAA_29
Motif
Other DBs
NCBI-GeneID:
106459600
NCBI-ProteinID:
XP_022241828
EnsemblRapid:
LOC106459600
LinkDB
All DBs
Position
Unknown
AA seq
419 aa
AA seq
DB search
MSRKSNKRNYNVDEQDVQKFVLKPESELRFEVDSKNRITIELTSGTAEVFGTELVRHRKY
TFGPTVMKAIFTWQGCTITLTGRPEVVYVAKETPMVFYINVHAALEQMRQEAEFKDSKGP
TVMLVGPIDVGKSTLCRLLLNYAVRLGKTPVFVDLDVGQGQISIPGTVGALIVERPADVE
EGFSQQTPLVYHYGHKGPGDNLTFYNTVVTRLADSINSKIHLNKKVKSSGIIINTCGWVK
NQGYQAITHAAFAFEVDVILVVDEEKLCFELHRDVPSFVQIIAVPKSGGTVERSKSVRAK
TRDSRVQEYFYGLRTPLFPHVFDVKFSDIKIYRVENSQKKKLSVKLFPVEIGPSLLHHVL
AVTFSNNVEEHPMLSNVAGYICVTGVNMEEELLTVLSPQPQPLPNSLLLFSDVQFIDST
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagaaagagtaataaaagaaattataacgtcgatgaacaggatgtccaaaagttt
gttcttaagccagaatcagaactgagatttgaagtggattccaaaaatagaataacgatc
gagttaacttctggtacagcagaagtttttggaacagagctggtgagacataggaaatac
acatttggacctacagttatgaaagccatatttacctggcaaggatgtactattacactt
actggcagaccagaagttgtgtatgttgccaaggaaactcctatggtgttctacatcaat
gtgcacgcagcattagaacaaatgcggcaggaggctgaatttaaagattctaaaggacct
acagttatgttagtagggccaattgatgtaggaaaaagtactctttgtcggctgctattg
aattatgctgtacgcttaggaaaaactcctgtttttgtagatctcgatgttggacagggc
caaatttctatacctggaacagtaggagctttaatagttgaacgtccagcagatgtagaa
gaagggttttcccagcaaacaccacttgtctaccactatggacacaaagggcctggtgac
aatcttacattttacaacactgtagttacaagactagctgatagcatcaactctaaaata
catttaaataaaaaggtaaagtcaagtggaataataataaatacgtgtggctgggtaaag
aatcaaggatatcaagcaataactcatgctgcttttgcattcgaagttgatgttatcttg
gttgttgatgaagaaaaactgtgcttcgaattacatcgtgatgtgccatcctttgtacaa
attattgcagtacctaaatcgggtgggacagtagaaagaagtaaatcagtgagagccaaa
accagagactctcgagttcaagaatacttttatggtcttcgtaccccactttttccacat
gtgtttgatgtaaagttttcagatatcaaaatatacagggttgaaaattctcaaaaaaaa
aaactttcagtgaaactctttccagttgagatagggccaagtctattacaccatgtgctt
gcagttactttttcaaataatgtagaagaacatcctatgttgtctaatgtagcagggtat
atttgtgtgactggagtaaatatggaagaagagctgctgactgtcctttctcctcaaccc
cagcctcttcccaatagtttattacttttcagtgatgtccaatttatagactcaacctga
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integrated database retrieval system
