Lentisphaera profundi: PQO03_08005
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Entry
PQO03_08005 CDS
T08820
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lpro
Lentisphaera profundi
Pathway
lpro03030
DNA replication
lpro03410
Base excision repair
lpro03420
Nucleotide excision repair
lpro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PQO03_08005 (polA)
03410 Base excision repair
PQO03_08005 (polA)
03420 Nucleotide excision repair
PQO03_08005 (polA)
03440 Homologous recombination
PQO03_08005 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpro03032
]
PQO03_08005 (polA)
03400 DNA repair and recombination proteins [BR:
lpro03400
]
PQO03_08005 (polA)
Enzymes [BR:
lpro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PQO03_08005 (polA)
DNA replication proteins [BR:
lpro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PQO03_08005 (polA)
DNA repair and recombination proteins [BR:
lpro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PQO03_08005 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PQO03_08005 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WDE95660
LinkDB
All DBs
Position
1:1990274..1993384
Genome browser
AA seq
1036 aa
AA seq
DB search
MSEQPSIFVIDSMAYIFRAFYGIRANMHSQDGLPTNALFGFINSFENIIRDFNPSQIVAV
FDAGSETFRNEMYAEYKANRKECPEELKPQFDLVKEYIALRGIPLLIQKGFEADDIIATV
ATQATGAHIKTVICSGDKDLMQLVNDHTYICHTHKDNLMIDAEKVFKIMGVRPDQIVDYL
SICGDSADNIPGLPGIGPKGASKLLAEFNDLETILASHDKIKGKKQSETIREKADLAHLS
KSLVILKDEMTLEKTYDELIPTQPDFEGLADFYERMGFSRFLRDLPKIQSAYEGNSKPNL
KQSLKSGGPVTLRVETFAPRPFQHEILKLKAEFENGLEFDVLEESTHLGKTTEEIFFALK
NTFIDCELTLVSENHTIIPEDLKSKRKCILTWEWLAASWLHDIEIGIEQISSHHLPLIQE
HLYLNAQFADLLATATVEYNSQRHDYNIIQSITELQQILKKISDSGQAISFDTETTGLDV
RTAQIVGLGLAIQDHHAWYIPFNSSLDKDTIITELKPFFANSELRFFAQNAKFDLQMLHY
AGIQVNNIDFDTLVASFICNPSRQFHDLDSLALHYLNYRKISTVSLIGKGKKQITMAELP
IEKVATYCCEDVDITLRLRTELEAELHRRGLRDLFDSMDIPLVPVLSEMENHGISVNLSR
LETISTEFSQERLKCEEQIYALAGHEFNINSPKQVGTVLFEEMGLKAGKKTATGYSTSAD
VLENLAPDSEIVRVILRHRTLSKLISTYADALPKEVSPLDDRIHTRFSQTTAATGRLAST
QPNLQNIPTRTEEGKSIRSAFIAAEGHNFLSCDYSQIELRIMAELSQDPGLLEAFSKDLD
VHSYTASLVFDTDLNEITKQQRYAAKAVNFGIMFGQGPYGLAKEIGVSADEAKQFISNYF
KRYPDVQKFMSQCVEDAREKGYSETSFGRRRYLPEMLSSNGRIRSGAERISVNSPIQGTA
ADIIKIAMINVSKELHKRQLKSKMLLQIHDELLFEVPDDELDIMKELIPKIMTDIPSIKV
PLKVDSAIAKSWDQCD
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagcaaccctccattttcgtcattgattcaatggcctatatcttccgtgccttc
tatggtattcgcgccaatatgcattctcaagatggcctccccacaaatgccctctttggt
tttattaattcttttgaaaatattattcgcgattttaatcccagtcaaatcgtggcagta
tttgatgctggttcagaaactttccgaaatgaaatgtacgctgaatacaaagctaaccgc
aaagaatgccccgaagaactaaaacctcaattcgacttagtcaaagaatatattgctcta
cgcggcatccccttacttatccaaaaaggttttgaggccgatgatattattgcgactgtc
gcaacacaggcgactggtgctcatattaaaactgtcatttgctcaggtgataaagatttg
atgcagctcgtcaatgatcacacatatatctgccacacccacaaagataacttaatgatt
gacgccgaaaaggtttttaaaatcatgggcgtccgtccggatcaaattgtcgattatctc
tctatatgtggggatagcgccgataatatcccaggcctacctggcatcggcccaaaaggc
gcatcaaaattactcgcggaatttaatgacctcgaaacaatcctagctagtcacgataag
atcaaaggaaaaaaacaatccgaaaccattcgcgaaaaagctgatctcgcgcacttatct
aaatcacttgtcatcctcaaagatgaaatgactctagaaaaaacctatgatgaactcata
cctactcagcccgatttcgagggtttagcagatttttacgaacgcatgggattttcgcgt
tttttgcgtgatcttccgaagatccaatccgcttatgaagggaatagtaagcccaatcta
aaacagtcccttaaatccggaggccctgtcactcttcgagttgagacctttgcaccccgc
ccctttcagcacgaaatcctcaaactgaaggccgaatttgaaaatggcttagaatttgat
gtattagaagaatccactcatttaggaaagaccaccgaagaaattttctttgctctcaaa
aatacttttattgactgtgagctcacccttgttagtgagaaccacactattattcccgaa
gatctaaaaagtaaaaggaagtgcattctcacatgggaatggcttgctgcttcatggtta
catgatattgaaattggcatagagcaaatctcttcacatcaccttcctttgattcaagaa
cacctttatttgaatgcgcaattcgcagacttattagctactgccacagtagaatataat
tcgcaacgccatgactacaatattattcagtctatcactgagctccagcaaattctaaag
aaaatcagcgatagcggccaagcaatttcctttgatactgaaacgaccggattggatgta
cgtacggctcaaatcgtcggtctaggtttagccattcaagatcatcacgcttggtatata
ccctttaatagctcgctagataaagataccatcattaccgaactcaagccatttttcgcc
aattcagagctcagattttttgcgcaaaacgcaaagtttgatttacaaatgttgcactat
gcaggcatccaagtcaacaacattgattttgatactttagtggcttctttcatctgtaat
ccatcacgccaatttcacgacctcgattcgcttgccctgcactatcttaattaccgcaag
atctctactgtatcacttattggtaaaggcaaaaaacaaatcaccatggctgagctgccc
atagaaaaggtcgctacttattgttgcgaggatgtggatatcaccctacgccttagaact
gaactagaagctgaacttcatcgccgtggcttacgagatctatttgatagcatggacatc
cctctcgttcctgttttatccgaaatggaaaatcatggtatctcagttaatctttctcgc
ttagaaacaatctccactgaattcagccaagaacgtctaaaatgtgaagaacaaatctac
gctttagccggtcatgaattcaatattaattcccccaaacaagtcggaactgtgctcttt
gaagaaatgggacttaaagccggcaaaaaaacagctacaggttactccacaagtgcggac
gttctcgaaaaccttgctcctgactcggagatcgtgcgcgtcatcctccgtcaccgtact
ctgagtaaacttatttctacttatgcagatgccctgcccaaagaagtttcgcccttagac
gacagaatacacacacgtttctcacaaactactgctgcaacgggacgcctcgcatcaaca
caacccaatttgcagaatatccccactcgtactgaggaaggcaaaagtattcgttctgca
ttcatcgctgcagaaggccacaactttctctcttgcgattattctcagatcgaattacgc
atcatggctgaattaagccaagatccaggcttactcgaagcctttagcaaagacttagat
gtccatagctacacagcttcactcgtgttcgatactgatcttaatgaaatcacaaaacaa
caacgttatgctgccaaagccgtgaattttggaattatgtttggccaaggcccctatggt
cttgcaaaagaaatcggcgtctctgctgatgaagccaagcaattcatctccaattatttt
aaacgctaccccgatgtacaaaaattcatgtcacaatgcgtagaagacgctcgcgaaaaa
ggctattctgaaacctcttttggacgtcgtcgctacctacctgaaatgctctcttctaat
ggacgtatccgttcaggagccgagcgtatttcagtcaactcccccatacagggtacggct
gcagacattattaaaattgcgatgattaatgtttctaaggaactccataaacgtcaattg
aaatctaaaatgcttcttcaaattcacgatgaattgctctttgaagtacctgatgacgaa
cttgatataatgaaagaactgattccaaaaattatgaccgatatcccctcaatcaaagtc
cctttaaaagtagactctgccattgctaaatcttgggatcaatgcgattaa
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