Lacticaseibacillus rhamnosus ATCC 8530: LRHK_2663
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Entry
LRHK_2663 CDS
T01961
Symbol
rpoE
Name
(GenBank) putative DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lra
Lacticaseibacillus rhamnosus ATCC 8530
Pathway
lra03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lra00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LRHK_2663 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lra03021
]
LRHK_2663 (rpoE)
03400 DNA repair and recombination proteins [BR:
lra03400
]
LRHK_2663 (rpoE)
Transcription machinery [BR:
lra03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LRHK_2663 (rpoE)
DNA repair and recombination proteins [BR:
lra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LRHK_2663 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Patatin
Motif
Other DBs
NCBI-ProteinID:
AER65383
LinkDB
All DBs
Position
complement(2590169..2590840)
Genome browser
AA seq
223 aa
AA seq
DB search
MKLKAFANADKSELSMIEVAHEILEEKGDTMAFVDLANEIQNYLGKSDEEIRERLPQFYT
DLNVDGSFISLGDNVWGLRAWYPYDSVDEEVNHPEDEEEVPRRKKRKKVNAFLADVADDD
DVIDYNDDDPEDEDLDADSDDDDFDDDDSTGFHDKIGKAGDSDDDSDDDPDDGLPDGIEG
QLAEFGDNDSDDDDDTDDITADFSGDDDDDSDNDDDEDDNDKH
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
ttgaaactcaaagcatttgccaatgccgataaatcagaattatcaatgatcgaagtagcc
catgagatcctcgaagaaaaaggggataccatggcgttcgttgatctggccaatgagatc
cagaattatctcggtaagagtgacgaagagattcgtgaacgtttgccgcaattctatacg
gatctcaatgtggatggcagcttcatttctttaggcgataacgtttggggcctgcgcgct
tggtatccatacgattccgttgatgaagaagttaaccatccggaagacgaagaagaagtg
ccgcgtcgcaagaaacgtaagaaagttaatgcgttcttggcggatgttgccgatgacgat
gacgtgatcgattacaacgacgatgatcctgaagatgaagatctcgacgctgatagcgat
gacgatgatttcgatgatgatgacagcactggctttcatgataagatcggcaaggccggc
gatagtgacgatgacagcgatgatgatcctgatgatggacttcccgatggcattgaaggt
cagctagctgaatttggcgacaatgacagcgatgacgatgacgacaccgatgacatcaca
gctgacttctccggcgatgacgatgatgacagcgataatgatgacgatgaagacgacaac
gataaacattaa
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