Lacticaseibacillus rhamnosus LOCK908: LOCK908_1310
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Entry
LOCK908_1310 CDS
T02731
Name
(GenBank) tRNA S(4)U 4-thiouridine synthase
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
lrc
Lacticaseibacillus rhamnosus LOCK908
Pathway
lrc00730
Thiamine metabolism
lrc01100
Metabolic pathways
lrc01240
Biosynthesis of cofactors
lrc04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
lrc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LOCK908_1310
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
LOCK908_1310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrc03016
]
LOCK908_1310
Enzymes [BR:
lrc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
LOCK908_1310
Transfer RNA biogenesis [BR:
lrc03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
LOCK908_1310
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
DUF1338_N
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
AGP73949
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Position
1262221..1263438
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AA seq
405 aa
AA seq
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MQYSEIMVRYGELSTKGKNRQAFIGRLNGNVTRALHEFPNLTIRPKRDRMHIELNGEPSD
QVMARLSQVFGIQNFSPSIAVEKDMAKVHEVALQLMNETAPHGISYKVNTRRSDHDFALD
TNAMNLDLGDFLTDKRPDLVVKMHHPDMILRVEVRREAIYLSTKTIQGAGGLPVGTAGRA
ALMLSGGIDSPVAGYYALKRGVDIEMVHFFSPPYTSQQALNKAKQLTAKLTPYVGRIYFI
EVPFTEIQEAVKATVPEGYLMTVQRRMMLRLTEAIAKQRGDLAIFNGESVGQVASQTLES
MAAINDVTTMPIIRPVATMDKNEIIAEAEKIDTYDLSIMPFEDCCTIFAPPSPKTKPKTD
RARYYESKLDVDGLMARALAGIKVQEIKSSDQFLNQDQDVIAELL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcaatattcagaaattatggttcgttacggcgagctttcgaccaagggaaaaaatcgg
caagcgtttatcggtcgtttgaacggtaacgttacacgagcgctgcatgaattccccaac
ctcaccattcggcctaaacgtgatcggatgcacattgaattgaatggcgagcctagtgat
caggtgatggcacgactgtcacaggtattcggcatccagaatttttcaccaagtattgcc
gtagaaaaggatatggcaaaagtccacgaggttgcgttgcagctgatgaatgaaacggca
ccgcacggcattagctataaggttaatacgcggcggagcgatcatgactttgccttggat
accaatgctatgaatcttgatttaggcgatttcttgacggataagcggccggacttagtt
gtcaaaatgcatcatcctgatatgattttgcgagttgaagtccgtcgtgaagcaatttat
ttatccactaaaacaattcaaggtgctggcggattgccggttggaacagcagggcgcgcg
gccttgatgcttagtggcgggattgattcgccggttgcgggttactatgcgttaaaacgt
ggcgtggacattgaaatggtgcactttttcagcccaccttacaccagtcaacaggcgctg
aataaggctaaacagctcacggccaagctgaccccttatgttggccggatttactttatt
gaagtaccatttaccgagattcaggaggcagtcaaagcaacggttccggaaggttatctg
atgaccgtgcaacgccgaatgatgttgcgactaaccgaagcgattgccaaacaacgtggc
gatctggctatctttaatggtgagtcagtcggccaggtggcttcgcagacgctggaatca
atggctgcaatcaatgatgtcaccacgatgccgattattcgtccggttgcgaccatggat
aagaatgagatcattgccgaagcagaaaagatcgacacgtatgatttatcgatcatgccg
tttgaagactgttgtactatttttgccccgccgtcgcctaaaaccaaaccaaagacggat
cgcgcacggtattacgaaagcaaacttgatgtcgatggtttgatggcgcgcgcgttggcc
ggaatcaaggttcaggagatcaagtcatctgatcagttcctgaatcaggatcaggatgtt
atcgcagaattgctttaa
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