Lolium rigidum (rigid ryegrass): 124647551
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Entry
124647551 CDS
T09103
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124647551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124647551
Enzymes [BR:
lrd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
124647551
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
124647551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
124647551
NCBI-ProteinID:
XP_047043429
LinkDB
All DBs
Position
4:137968654..137984123
Genome browser
AA seq
1182 aa
AA seq
DB search
MPTAPEKSPAAAAAGDYATLRELYRPHIESFDYFLDEGLDKMLLSIRPMEITDPSSNATL
RMSLEKGHVLPPMKDGRLEQPLYPQECRQGRISYSGEFKVEAFFQFNDGAPIRQTFNFGH
LPIMLMSKLCHLRGADSRKLIYHGEEATEMGGYFISGGMERLIRILIIQKRNYPMSMVRS
SFVKRGEGYTDKAVVIRCVQLDQSSSVTVKLYYLQNGSARLGFWFGGREVLLPVGIVLKA
LVDTSDWEIGASLTCCYSDKHGNGKGVVGTELIGERTQIILDEVRALSLITRKQCLVHIG
KYFRSVMDGFEKDDYETVAEAVIKDYILVHLQNDNHAKFNLLIFMLQKLYALVDQTASPD
NPDALQFQEALLPGYLITVFLKDRIQDWMRKSKRVILEELTKNKSFELSNSMEIRKILSK
HTTFVGRAIESLIKVGRANSQSMLDLPQRDGMTIQAERLNFHRYISHFRSVHRGAAFAKM
RTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRVSSCYNSEGAIKDFQKIKDKLL
SELVRGGMTPLLPKIEHAGPPEILHVHLDGCIVGSIASAKIDEIVNYLRRLKLLSHPATP
EDLEVGYVPLSLGGAYPGLYLFTSPARFVRPVKNLVSLPGGEPSIELIGPFEQAFMEIQC
QDGGNGGRGTLFPATHEEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSGQA
LKFRTDVKAFHLQTPQTPIVRTATYKKYHMDEFPSGTNAIVAVLSYTGYDMEDAMILNKS
AVDRGMFRGDIYQTECIDLSSKRRENVPEVFAKSRLSRDTSDVIDSDGLPRVGEAVVPNE
QYYSVYNTLTGAIRPVRLKGTEPATIDYVAVNGANSKGFLEKVNIRLRRKRNPIIGDKFS
SRHGQKGVCSQLWPDIDMPFSEHTGMRPDLIINPHAFPSRMTIAMLIESIAAKAGSLHGK
FIDATPFASSVKKEGENSSKYDSIVDELGPMLASYGFNYHGVETLYSGLFGTYMNCEIFI
GPVYYQRLRHMVSDKFQVRTTGRVDQVTRQPIGGRKHGGGIRFGEMERDALLAHGASYLL
HDRLHTCSDYHIADVCSLCGSLLTATVIKSETQKKSKRNMLGVNTLKPPKNFACQACQTN
KGMETVAMPYVFRYLAAELAAMNIKLGLRLSNRRESPPSNES
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgccgacggcgcccgagaagtcgcccgccgcggcggcggcgggcgactacgcgacgctg
cgggagctgtaccggccgcacatcgagtcgttcgactacttcctcgacgaggggctcgac
aagatgctcctctccatccgccccatggagatcaccgacccctcctccaacgccaccctc
agaatgtccttagagaagggtcatgtgctcccaccaatgaaggatggtcggttggaacaa
ccgctctacccgcaggagtgcaggcaaggtagaatttcatatagtggcgaattcaaagtt
gaagccttcttccagtttaatgatggggcgccaatcaggcaaaccttcaattttggccat
ttgcctattatgttgatgtcaaaactttgccacctaagaggtgctgattcgcgtaaacta
atttaccatggcgaggaggccacagaaatgggcgggtactttataagtggtgggatggag
agacttatacggattcttattatacaaaagcgtaattacccgatgagcatggtccgtagt
tcttttgttaagcgcggcgagggatataccgacaaagctgtggtgataagatgtgttcaa
cttgaccagtccagcagcgtgacagtaaagttgtattacttacaaaatggaagtgcaagg
ctagggttttggtttggaggcagagaggttctccttccggttgggattgttctcaaggcc
cttgttgatacgagtgactgggaaataggtgcaagcttgacatgctgctacagtgataaa
catggaaatggaaagggggttgtcggcactgagctaattggtgaaaggacacaaataatt
cttgatgaagtcagagctctgtccctcatcacgcgcaaacaatgcttggtgcatattggc
aagtactttcggtctgtgatggatggatttgaaaaggatgattatgaaactgttgctgag
gcggttatcaaggactatattctcgtgcacctgcagaatgacaaccatgcaaaatttaat
ctattgatatttatgctacagaaactttatgctcttgttgatcaaactgcctcacctgat
aatcctgatgcacttcaattccaagaagctctcttgcctgggtacctgatcacagttttt
ctgaaggataggattcaagattggatgcggaagtctaaacgtgtaattcttgaagagctg
acaaagaataaaagcttcgaactcagtaactcaatggagataaggaaaattctcagtaaa
catacaacatttgttggcagagctatcgagtctttgataaaggttggcagagcgaattca
cagtcaatgttggatcttccacagagagatgggatgaccattcaagctgaacgactcaac
ttccatcgttatatctcacatttccggtctgtccataggggtgctgcttttgctaaaatg
cggacgacaactgttaggaagttacttccagagtcttggggtttcctgtgtccagttcat
acaccagatggagagccctgtggtttactgaaccatatgacttccacatgccgtgtttca
tcctgctataactcggaaggcgcaattaaagattttcagaaaataaaggataaactttta
tctgaattggttcgtggtggaatgaccccattgttgccgaagatagagcatgctggtccc
ccggaaatccttcatgtccatttagatggatgcattgttggttctattgcttctgctaag
attgatgagatagttaactatcttcggagattaaagctactgtcacacccagcgactccg
gaagatttagaagtgggctatgttcccttgagtcttggtggggcttatcctggcctctac
cttttcacaagtcctgcgagatttgttcgaccagtgaaaaatctggttagtctacctggt
ggagagccaagtattgagcttattggaccatttgaacaggcatttatggagatacaatgt
caagatggtgggaatggtgggagaggaacattgtttcctgcaactcatgaagaaattcac
cctacggccattctaagtgtagtcgcaaatctgactccttggtcagatcacaaccaaagc
cctcggaacatgtaccaatgccagatggcaaagcaaactatgggtttttctggtcaagct
ttaaaatttcgtacagatgttaaagcattccatttacagacccctcagacaccaattgtt
cgaactgctacatataaaaaatatcatatggatgaatttccatcaggaacaaatgctatt
gttgcggtgctatcatatacaggctatgacatggaggatgccatgattttgaacaaatca
gctgttgatcgtgggatgttccgtggagatatttaccagacagagtgcattgacttgtca
tcaaaaaggagagaaaatgttccggaagtcttcgccaagagtagactatcgagggacaca
agcgatgtaattgactcagatggccttcctcgggttggagaggcagtagttccaaatgag
cagtactacagtgtctataacacactcactggtgcgataaggcctgtcagactaaagggc
acagagccagcaactatcgactatgttgctgtcaatggggcaaattcaaaaggtttccta
gagaaggtaaatattcgtctgcgccgcaagagaaatcctataattggtgacaagtttagc
agcagacatgggcagaagggagtttgttcacagttgtggcctgacattgatatgccattc
tctgaacataccggcatgaggccagatctcatcattaatcctcatgcttttccttcaaga
atgacaatagcaatgctcatagagtctatagcagcaaaggctggaagtcttcatgggaag
ttcattgatgcaacaccttttgcaagctcagtcaaaaaggaaggggaaaattctagtaaa
tatgattccattgtggatgaactgggtcccatgctagcatcttatgggtttaattatcat
ggggtagaaaccctgtacagcggactttttggcacatatatgaactgtgagattttcatt
ggtcctgtatattaccaacgtcttcgtcatatggtctcagacaaatttcaggttcgcacg
acaggccgcgtagatcaagtaacaagacagccgataggaggaaggaaacacggaggaggg
atccggttcggtgagatggagcgcgatgcactccttgctcacggggcttcctatctcctg
catgacaggctccacacctgctcggactaccacatagcggatgtgtgctccctctgcggg
agcctcctgacagcgacggtgatcaagtcggagacgcagaagaaatccaagcgcaacatg
ctcggcgtcaacaccttgaagccccccaagaactttgcgtgccaggcctgccaaacaaac
aaagggatggagaccgtagcgatgccttatgtcttcaggtatttggctgcagagctggcg
gccatgaacataaagctgggtctacggctcagcaacaggagagaaagtcctcccagcaat
gaatcctga
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integrated database retrieval system
