Lolium rigidum (rigid ryegrass): 124647840
Help
Entry
124647840 CDS
T09103
Name
(RefSeq) probable sarcosine oxidase
KO
K00306
sarcosine oxidase / L-pipecolate oxidase [EC:
1.5.3.1
1.5.3.7
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00260
Glycine, serine and threonine metabolism
lrd00310
Lysine degradation
lrd01100
Metabolic pathways
lrd04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
124647840
00310 Lysine degradation
124647840
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
124647840
Enzymes [BR:
lrd01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
124647840
1.5.3.7 L-pipecolate oxidase
124647840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Amino_oxidase
FAD_oxidored
Motif
Other DBs
NCBI-GeneID:
124647840
NCBI-ProteinID:
XP_047043663
LinkDB
All DBs
Position
4:complement(176964336..176965520)
Genome browser
AA seq
385 aa
AA seq
DB search
MGSCAAHAAASRGATVLLLERFDLLHHLGSSHGESRTIRDAYAKAHYPPMVRLARRLWGD
AQADAGYRVLTPSPNLCMGPRSNARLLAAVRNAGAAEVHDVDERWGGVFRVPDGWVTAVS
EIGGGVLNATKALAMFHTLAVKKGAVVRDNTEVVGIVKKEGEDGVRVVTSKGEEFHGAKC
IVTVGAWASKLVKSVAFMELPIQPVQKTTMYWKIKPGREHELTAEAGFPTFSSYGDTFVY
STPSLEFPGLIKINDNSGSPCDPDSRDWGSGAASAAERVAQWIQEFMPGHVETAGGPVIR
QSCMCAMTPDKDFVIDFLGGEFGQDVVLGAGFSCHGFKMGPAVGMILAEMAIDGEARTAV
EAGVELHHFKINRFEGNPAGNTNKD
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgggcagctgcgcggcgcacgcggcggcgtcccgcggcgcgaccgtcctgctcctcgag
cgcttcgacctgctccaccacctcggctcctcccacggcgagtcgcgcaccatccgcgac
gcctacgccaaggcgcactacccgcctatggtccgcctcgcccgccgcctctggggcgac
gcccaggccgacgccggctaccgcgtgctcaccccgtcgccaaacctctgcatgggcccg
cgcagcaacgcccggctcctcgccgccgtcaggaacgcgggcgcggcggaggtgcatgat
gtcgacgagaggtggggaggcgtgttccgcgtcccggacgggtgggtgacggcggtgagc
gagatcggcggcggcgtgctgaacgcgaccaaggcgctcgccatgttccacacgctggcc
gtcaagaagggcgccgtcgtcagggacaacacggaagtcgtcggcatcgtcaagaaggaa
ggagaggacggcgtccgggtggtgacaagcaagggcgaggagttccatggcgccaagtgc
atagtgacggtcggcgcgtgggcgagcaagctggtaaagtccgtcgccttcatggagctg
ccgatccagccggtgcagaagaccaccatgtactggaagatcaagcctggccgcgagcac
gagctcacggcggaggccggattcccgacgttctcgagctacggcgacacattcgtgtac
agcacgccgtcgctggagttcccgggcctcatcaagatcaacgacaacagcgggtcgccg
tgcgacccggacagccgagactggggctccggcgccgccagcgccgccgagcgcgtcgcc
cagtggattcaggagttcatgccgggacatgtggagaccgccggcgggccggtcatccgg
cagtcgtgcatgtgcgccatgactccggacaaggacttcgtcatcgacttcctcggcggg
gagttcggccaggacgtggtgctcggtgccggtttctcttgtcacgggttcaaaatgggg
ccagcggtggggatgatccttgccgagatggccatcgatggcgaggcgaggaccgcggta
gaggccggggtggagctccaccatttcaaaatcaaccggttcgagggcaatcccgcgggg
aacaccaacaaggactag
DBGET
integrated database retrieval system