Lolium rigidum (rigid ryegrass): 124653314
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Entry
124653314 CDS
T09103
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03020
RNA polymerase
lrd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124653314
09124 Replication and repair
03420 Nucleotide excision repair
124653314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124653314
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124653314
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
124653314
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
124653314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
124653314
NCBI-ProteinID:
XP_047048338
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All DBs
Position
5:complement(146719049..146726452)
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AA seq
328 aa
AA seq
DB search
MERPATGVTYQRFPRVKIRELKDDYAKFELRDTCASMANALRRVMIAEVPTVAIDLVEIE
SNSSVLNDEFIAHRLGLIPLTSSAAMGMRFSRDCDACDGDGSCEHCSVEFHLAARATDSG
QTLEVTSTKDLRSTDPKVCPVDQAREYQQALGNIDPYDGDPQGDHRGILIVKLRRGQELR
LRAIARKGIGKDHAKWSPAATVTFMYEPDIRINEELMETLTLEEKTSWVESSPTKVFDID
PNTQQVVVSDPEAYTYDDEVIKKAEAMGKPGLIEINAKEDSFVFTVETTGALTAYELIMN
AITVLRQKLDAVRLQDDDADLGELGAHL
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggagcgtccggcgaccggcgtgacctaccagcggttcccgcgcgtgaagatccgcgag
ctcaaggacgactacgccaagttcgagctgcgcgacacctgcgcgagcatggccaacgcg
ctccgccgcgtcatgatcgccgaggtgcccaccgtcgccatcgacctcgtcgagatcgag
agcaactcctccgtcctcaacgacgagttcatcgcgcaccgcctcggcctcatcccgctc
acctcctccgccgccatgggcatgcgcttctcccgcgactgcgacgcctgcgacggcgac
ggatcctgcgagcactgctccgtcgagttccacctcgccgcgcgcgccactgactccggg
cagacgctcgaggtcacgtccaccaaggacctacgctccaccgaccccaaggtatgcccc
gtcgaccaggccagggagtaccagcaggccctgggcaacatcgacccctacgacggcgac
ccccagggagaccacaggggcatactaattgttaagctgcgtcgtgggcaagaactccgt
cttcgagcaattgctaggaaaggaatcggaaaggaccatgccaagtggtccccagctgct
actgtgaccttcatgtatgagcctgatatacgtattaatgaagaactcatggagacactt
acacttgaggaaaaaacaagctgggtggagagcagccctacaaaagtatttgacattgat
cctaacacccaacaggttgtggtttcggatccagaggcatacacatatgatgacgaggtg
atcaagaaagcagaggccatggggaagccaggactgatagagatcaatgccaaggaggac
agctttgtgttcaccgtggaaacaacaggcgccctcacagcctacgagctgattatgaac
gccatcacggtgttgaggcagaagctggacgctgttcgtctgcaagacgatgatgcggat
cttggtgagcttggcgcccacctttga
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