Lolium rigidum (rigid ryegrass): 124654278
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Entry
124654278 CDS
T09103
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like isoform X1
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124654278
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lrd01009
]
124654278
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124654278
03036 Chromosome and associated proteins [BR:
lrd03036
]
124654278
Protein phosphatases and associated proteins [BR:
lrd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
124654278
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
124654278
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
124654278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
HEAT_EZ
Htt_N-HEAT_1
Vac14_Fab1_bd
PDS5
SCD
CLASP_N
Cnd1
Adaptin_N
CEP104-like_TOG
DUF3102
Motif
Other DBs
NCBI-GeneID:
124654278
NCBI-ProteinID:
XP_047049247
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All DBs
Position
5:complement(155533288..155543028)
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AA seq
587 aa
AA seq
DB search
MAMVDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDE
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLSTVEETCVRDKSVESLCRIGAQMKEN
DIVDFFVPVVKRLASGEWFTARVSSCGLFHIAYPSATDPLKTELRTIYGQLCQDDMPMVR
RAAASNLGKFAATVEQSHLKTEIMSIFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRADLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPQLAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLEDKVFSIREAAANNLKRLAEEFGPEWAMQHIIPQV
LEKINNPHYLYRMTILQAISLLAPVMGADITCQKLLPVVINSSKDRVPNIKFNVAKVLQS
LVPILDQSVVDKTVKPCLVELSEDPDVDVRYYANQALQACDQIMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctatggttgatgagcctctttatccaattgctgtgctgatagatgagcttaaaaat
gaagatattcagttgcgtctgaactctatcagaagactttccacaattgcacgggcactt
ggggaagaaagaaccaggaaggaactgatacctttcctcagcgaaaacaatgatgatgaa
gatgaggtgcttcttgcaatggctgaagaattgggtgttttcattccttatgttgggggt
gtagaacatgcccatgtcttgctcccaccattggagacattgtctacagtggaggagact
tgtgtccgagacaaatcagtcgagtcattgtgccgtattggtgcacagatgaaggaaaat
gacattgttgacttcttcgttccagtagtgaagaggctagcatctggtgagtggtttaca
gctcgagtatcatcctgtggtcttttccatatcgcctacccaagtgccaccgatccattg
aaaacagaactgaggaccatttatggtcagttatgtcaagatgatatgcctatggtcaga
agggcggctgcgtcaaacctcgggaaatttgctgctactgttgaacagagccatttgaag
acagaaatcatgtcgatcttcgacgatctgactcaagatgatcaagattcagtacgttta
ttggctgttgaaggatgtgccgctcttggaaaactgttggaaccacaagattgtgtagca
catatccttccagtcattgtcaatttctcccaggataaatcttggcgtgtccgttatatg
gttgccaatcaattgtatgagctctgtgaggctgttggtcctgagcctacgagagcggac
ttggtgcctgcatatgttcgtctccttcgtgataatgaggctgaagtgcggatagcagct
gccgggaaagtcacgaagttctgtaggatattaagtccacagcttgcaattcagcacatt
cttccatgtgttaaggaattatcatcggattcgtctcagcatgttcgctcagctttggct
tcagtcattatgggaatggcccctgtgttgggaaaggatgctaccattgagcaacttctt
cctatttttctttctttgctgaaggacgaattccctgatgtgcggctcaacataatcagc
aagcttgatcaagtcaatcaggtcattggaattgacttgctgtcacaatctctattgccg
gccattgtagaacttgcagaggataggcactggagggttcgacttgcaataattgagtac
atccctctgttggccagtcagttaggtgttgggttctttgatgacaagctcggggctctt
tgcatgcaatggttggaagataaggttttctccatcagggaagctgctgcgaataacctg
aagcgtctagcagaggagtttggtccagagtgggcaatgcaacatataattcctcaggta
ttggagaagataaacaacccacattatctgtatcgcatgaccatcctgcaagctatctca
ttgctcgcacctgtcatgggtgcagacataacatgtcagaagctgctccctgtcgtcatt
aattcgtcaaaggacagggttccgaacatcaagttcaatgttgcaaaagttctgcagtcg
cttgtaccgatccttgatcaatctgtcgtcgataaaacggtgaaaccatgcctcgtcgag
ctgagcgaggacccggatgtggacgtaagatactatgccaaccaggcccttcaggcatgc
gaccaaatcatgatgtcaagctaa
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