Lolium rigidum (rigid ryegrass): 124654279
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Entry
124654279 CDS
T09103
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like isoform X1
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124654279
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lrd01009
]
124654279
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124654279
03036 Chromosome and associated proteins [BR:
lrd03036
]
124654279
Protein phosphatases and associated proteins [BR:
lrd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
124654279
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
124654279
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
124654279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
HEAT_EZ
Vac14_Fab1_bd
Htt_N-HEAT_1
PDS5
SCD
Cnd1
Adaptin_N
CLASP_N
TAF6_C
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
124654279
NCBI-ProteinID:
XP_047049249
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All DBs
Position
5:complement(155616259..155623619)
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AA seq
587 aa
AA seq
DB search
MAMVDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDE
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLSTVEETCVRDKAVESLCRIGAQMKEN
DIVDFFIPVVKRLASGEWFTARVSSCGLFHIAYPSATDPLKTELRTIYGQLCQDDMPMVR
RAAASNLGKFAATIEQSHLKTEIMSIFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRADLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPQLAIQHILLCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLEDKVYSIREAAANNLKRLAEEFGPEWAMQHIIPQV
LEKINNPHYLYRMTILQAISFLAPVMGAEITCQKLLPVVINSSKDRVPNIKFNVAKVLQS
LVPILDQSVVEKTVKPCLVELSEDPDVDVRYYANQALQACDQIMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctatggtcgatgagcctctttatccgattgctgtgctgatagacgagcttaaaaat
gaagatattcaactgcgcctcaactccattagaagactttccacaattgcacgggcactt
ggggaagaaagaaccaggaaggaactgataccttttctgagcgaaaacaatgatgatgaa
gatgaggtgcttcttgcaatggctgaagaattgggtgttttcattccttatgtcgggggt
gtagaacatgctcacgttttgctcccaccgttggagacattgtctacggtggaggagact
tgtgtccgagacaaagcagtcgagtcattgtgccgtattggtgcacagatgaaggaaaat
gacattgttgacttcttcattccagtagtgaagaggctagcgtctggtgagtggtttaca
gctcgagtatcatcctgtggtcttttccatatagcctatccaagtgccacagatccattg
aaaacagaactgaggaccatttatggccagttatgccaagatgatatgcctatggtcaga
agggcggctgcatcaaatcttgggaagtttgctgccactattgaacagagccatttgaag
acagaaatcatgtcgatctttgatgatttgacccaagatgatcaagattcagtacgttta
ttggcagttgaaggctgtgctgctcttggaaaattgttggaaccgcaagattgtgttgca
catatcctaccagtcattgtcaatttctcccaggataaatcttggcgtgtccgttatatg
gttgccaatcaattgtatgagctttgtgaggccgttggtcctgagcctacaagagcggac
ctggtgcctgcatatgttcgcctccttcgtgataatgaggctgaagtgcggatagcagct
gccgggaaagttactaagttctgtaggatattgagtccacagcttgcaattcagcacatt
cttctgtgtgttaaggaattatcatcggattcatctcagcatgttcgctcagctttggct
tcagtcatcatggggatggcccctgttctggggaaggatgctaccattgaacaactactt
cctatttttctttctttgctgaaggacgaatttcctgatgtgcggctgaacataatcagc
aagcttgatcaagttaatcaggtcattggaattgacttgctgtcacaatctctattgccg
gcaattgtagaacttgcggaggataggcactggagggttcggcttgcgataattgagtac
atccctcttttggccagtcagttaggtgttgggttttttgatgacaagctgggggcactt
tgcatgcaatggctggaagataaggtttactccatcagagaagctgctgcgaacaacttg
aagcgcttagcagaggagtttggtccagagtgggcaatgcaacatataatccctcaggta
ttggagaagataaacaacccacattatctgtatcgcatgaccatactgcaagcaatctca
tttcttgcgcctgtcatgggtgcagaaataacatgtcaaaaactgctccctgttgtaatt
aattcgtcaaaggacagggtgccgaacatcaagttcaatgttgcgaaagttctgcaatcg
cttgtaccgatccttgatcaatctgtcgtcgagaagacggtgaaaccatgcctcgttgag
ctcagcgaggaccctgatgtggacgtaagatactatgcaaaccaggcccttcaggcatgt
gaccaaatcatgatgtcaagctaa
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