KEGG   Lolium rigidum (rigid ryegrass): 124677465
Entry
124677465         CDS       T09103                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like isoform X1
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    124677465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lrd03021]
    124677465
Enzymes [BR:lrd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     124677465
Transcription machinery [BR:lrd03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     124677465
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 124677465
NCBI-ProteinID: XP_047069407
LinkDB
Position
7:complement(21729190..21739429)
AA seq 1248 aa
MEDPPRDNGQWTSSPEPELEPMMLDDNGESRSDTMDDSNGQSSMGVDRDQSFMDADMNGK
SSLDLDDESKGKYSSSHPEVPIDISLGSLEKFCKEASRSFFDEVGLISHQLNSYNHFVSH
GLQELFDSLEEITVEPDYDPSKKGPGGWRHAIIKFGKVKLDKPVFWSEKKSRDLNLKPRH
ARLQNMTYSSKMEVDVNIKVYSMEKSDKAKAGNDLSGHSKDLIVDKNQPMHIGRLPVMVN
SNLCWLHKDKKSEHKDKKSEYGSKEIDCLFDSGGYFLIKGIEKVFIAQEQKCLTRIWVAD
RPCWTVSYSSEIKIRRIYIKLIDSTKNNDISGTKIISISFLYANMPIWLMFFALGISSDK
EAFEMIDTGDSDASVMDAISATINESDELCEGFRKSSKARQYVDDLVKSQKFPPAESFDD
YVSKNLFPGIRGNRNKAYFLGYMVKCLLMAFTGRRKCDNKDDFRNKRLELPGELLGRELR
AHLRHAERLMVKALQRDLNSDRDLEFPLHCLDSSIITNGINRAFSTGAWCHPSKRNERCP
GVVATLRRTNPLQTMSDLRKSRLQVAYAGKVGDARYPNPSYWGKMCFMSTPDGENCGLVK
NLAVTAIVSSKVAQPLIDRFVSCGMNKLDEIHVEEIPKMDKIFLNGDWVGSCTDPDSFVR
RLRCMRRGGLVDPQVEIKRDKHQSPGEVRVFSDAGRILRPLLVVENLNKITKRKGHPYSF
QTLLQQEIIEFIGVEEEEDIRCAWGIKHLFPTSEEEDPGYTHCELDGSFLMGLSCGLIPF
ANHNFARRVLYQSEKHSQQAIGYSTTNPRTRVDTLSHQLFYPQKPLFKTFTADCIGRSNY
PFGRKDDFSRPEYSNGQNAIVAVNVHQGFNQEDSLILNRASLERGMFRTELIRSYKAEVD
TKGPIKRLKMKEKVNFGKMQSKKGRVDNLDDDGLPYVGASLQSGDIVIGKVSESGEDHSI
KLKHTEKGIVQRVLLSANDEGKNFAAVSLRQVRAPCVGDKFSSMHGQKGVAGFLECQENF
PFTRQGIVPDVVINPHAFPTRQTPGQLLEAALGKGITLGGKIRYATPFTTASVEVISEQL
HKAGFQRWGAESVLNGHTGARTESLIFMGPTFYQRLTHMSEDKVKFRNTGPVHPLTRQPV
ADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSEMHVCQTCERAANVIIRPVQG
GKKIRGPYCGFCQSLENIVKIPVPYGSKLLYQELFSMGICLKFKTEVR
NT seq 3747 nt   +upstreamnt  +downstreamnt
atggaggatccaccaagggacaatgggcaatggacaagtagccctgagcctgagctggaa
cctatgatgctggatgacaatggagagagcagatcagataccatggatgattcgaacggg
cagtcttctatgggtgttgacagagatcagtcttttatggatgcggatatgaatgggaaa
tcatccctggacctggatgatgagagtaaagggaagtactcttcgtcacatccagaagtt
cccattgacatcagcttgggaagcctagagaagttctgcaaggaagcatcaaggtcgttt
tttgacgaggttggtctgattagccatcagttgaattcctacaaccacttcgtctcgcat
gggctacaggagctttttgattcactagaggaaataaccgtcgagccggattatgatcct
tcaaagaaaggaccaggtggctggaggcatgccatcatcaagtttgggaaagtgaaactg
gacaagcctgtattttggtctgaaaagaagtcacgtgacctcaatctcaagccgagacat
gctcgcctccaaaatatgacatattcttccaaaatggaagtagacgtgaatattaaggtt
tattccatggagaaaagtgacaaggctaaagcagggaatgatctttctggtcacagcaaa
gatcttattgtggataaaaatcaacctatgcatattggtcgccttccagttatggttaat
tcaaacttatgctggttgcataaagataagaaaagtgagcataaagataagaaaagtgag
tacggaagtaaggaaattgactgcctttttgattctggtggatattttttgatcaaggga
atagagaaggtatttattgcgcaagagcaaaaatgtttgaccaggatttgggttgctgat
cggccttgctggactgtctcttattcgtctgaaatcaaaataagaagaatatatatcaaa
ctaattgattctacaaagaataatgatatcagtgggaccaaaatcatttccatttccttt
ttgtatgccaatatgcctatttggctaatgttttttgctctaggcatatcatctgacaag
gaagcatttgagatgatagacacgggagactctgatgcttctgttatggacgcgatatct
gcaactattaatgaatcagatgaactgtgtgaaggctttcgtaagtccagtaaagcccgc
cagtatgttgatgatttggtcaagagccaaaaatttcctccagcagagtcgtttgatgat
tatgtttccaaaaatctgtttcctggtataagagggaataggaataaagcatatttctta
ggttacatggtcaaatgccttctaatggcttttactgggaggcgcaaatgtgataataag
gatgacttcaggaacaagaggttggagctacctggtgaattgcttggaagagaacttcgg
gcacatcttaggcatgcggagagactaatggttaaggccttgcagagagatttgaatagt
gaccgtgatttggaatttcctctgcactgccttgattcttcaattattactaatggtata
aatcgtgccttttctactggtgcttggtgccatccctccaaaagaaatgaaagatgccca
ggagttgttgcaacgctaaggagaacaaatcctcttcaaacgatgtcagacttgaggaaa
agtcgcctgcaggttgcttatgctgggaaagttggtgatgcaagatatcccaatccgtcc
tactggggaaagatgtgttttatgtccacccctgacggagaaaactgtggacttgttaaa
aatctagctgtgactgctattgttagctctaaagtggcacagccattgattgacagattt
gtttcttgtggaatgaataaactggatgaaattcatgttgaggagattcctaaaatggat
aagatcttcctcaatggcgattgggtaggatcctgtactgatccagattcatttgtcagg
cgtttacggtgcatgagacgcggcggtctggttgatccacaggttgaaatcaaaagggac
aagcaccaatctcctggagaagtacgggtgttttctgatgcagggcgaatcctcagacct
cttcttgtggttgagaatctaaataaaattacaaaacggaagggccacccttactctttt
cagacactattgcaacaagaaataattgagttcattggtgttgaagaggaggaagatata
agatgtgcctggggaattaagcacctatttccaaccagcgaggaggaggatcctggttat
actcactgtgagctggatggatcttttctgatgggattaagttgtggtcttatcccattt
gcaaatcacaattttgctcgaagggtgctgtaccagtcggaaaaacactcgcagcaagct
attggatactccacaacaaatccacgaaccagagttgatactctttcccatcaacttttc
taccctcagaaaccccttttcaaaacatttacagctgattgtattggaagatcaaattat
ccttttggaagaaaagatgatttttctaggccagagtattccaatggacaaaatgcaata
gtggcagtcaacgttcatcagggattcaaccaagaggactcactgattttgaatagggct
tctcttgaacggggtatgtttagaactgagctcatccggagttataaggcagaagtagat
accaaagggcccatcaaacgactgaaaatgaaggaaaaggtaaactttggtaaaatgcaa
agcaagaaagggcgagttgacaatctggatgacgatggattaccatacgtgggtgcaagt
ctccagagtggtgacattgtaattggcaaagtgtcagaatctggtgaagaccatagtatt
aaactgaagcatacggaaaagggaatagtccagagagtgttgctctcagccaacgatgag
gggaagaattttgctgctgtgtctttaagacaggttcgagcaccttgcgtcggagataaa
ttttctagcatgcatggacagaaaggtgttgctggttttctagaatgccaggagaatttt
ccttttactcgccaaggaatagttccggatgttgtgataaatccgcatgcctttcctacc
cgtcaaactccaggccagctgcttgaagctgctttggggaagggaatcactcttggtggt
aaaattagatatgcaacaccattcacaacagcatcagttgaagttatctcggaacaattg
cacaaggctggatttcaaagatggggagctgaaagcgttctcaacggccacactggtgca
agaacggaatcactgattttcatgggtcctaccttctaccagaggctgacacacatgtct
gaagacaaggtgaaattccggaacaccgggccagtgcatcccctcacgaggcaacccgtc
gcggacaggaagaggtttggaggagtcaagtttggagaaatggagcgcgactgcctcctc
gcccatggcgcggctgccaacctacacgagcggctctttatgctcagcgacttttcggag
atgcacgtctgccagacatgcgagcgggcggcgaacgtcatcataaggcctgtccaggga
gggaagaagatccgaggcccctactgtgggttctgccagtctttggagaacatagtcaag
attcctgtcccctacggctcgaagctgctctaccaggaactcttcagcatggggatctgc
ctcaagttcaagaccgaggtccgctag

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