KEGG   Lolium rigidum (rigid ryegrass): 124685875
Entry
124685875         CDS       T09103                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    124685875
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lrd03021]
    124685875
Enzymes [BR:lrd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     124685875
Transcription machinery [BR:lrd03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     124685875
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 RNA_pol_Rpb2_3 AC_N
Other DBs
NCBI-GeneID: 124685875
NCBI-ProteinID: XP_047075859
LinkDB
Position
2:complement(5243837..5250496)
AA seq 1226 aa
MEEPETKGLRSPNGLDTKINVMDFMVLDDDGEGIFDVKEYAKGILHPSPDADGGHCPMDV
DLKGIPSMEDEEEVKSSSNPPAQVPTDISVESLEKFCKEAARSFFNERGLVSHQINSYND
FVDHGLQELFDSLGEITVEPDYDPSKNVGGVWRHATIKFGRVKLERPEFWADNCDLDEQT
LIMKPVHARLQKMTYSSKMNVEMTVQVYSLGQGDGSKTGKEPYIPKKVILPPETKWVTVG
RLPVMVKSKLCWLHELRETECQFDSGGYFIIKGMEKAFIAEEQKCLSRIWVSDLKGWYAC
YLSQIKEENVYVNLVQSKENGGFHKVINLSFLSATIPIWIMFFALGVSSDKEAFDMIDIQ
DCDSSLVNIISATIKESQAQCEAFRIGDRARQYVDKFIKETKSPPEQPFDGYVGKYLFPG
VSGNRSKAIFLGYMMKRLLMAYCRRWECDNKYDFRNKRLDLACQLLHRELRGHLKRAEKH
MVKVMQRHLSGDSDLQVLEHYVNASTITNGLNHAFSTGSWCHPYKYCKCSGIVATLMRTN
PLQMMSGLRKTRQLSSYWGSAGDARYPNPSYWGRLCFMSTANGESGFGKNLAVSAVVSSV
MSAPLLDLFVSCGMKKLDEVLVQELGGTDKIFMNGNLVGACAYPSEFVMHLRNMRRSKQI
DAQVEIKRDKQHKEVRIFSDAGRILRPLLVVENLKCITKLNAGSYSLMELMQQNIIELIG
AEEEEDIQCACGIRDLFSGDKKEGLLYYTHCELDPSFLLGLSCGIIPFANHNAAKRVLME
AKLSQQAIGYSSTNSQYRVDTVFHQMYYPQRPLFKTVVSDCLGKKDHTRPEYFNGQNAIV
SVSVHQGFNQEDSLVFNRASLERGMFRTLHFRSYKAQTQNKEVTRRLKNREKIDFGKTQS
KKGLVDSLDVDGLPYVGANLRSGDIVIGKVSESGEDHSVKLMHTEKGHVEKVVLSANDDG
NNYAVVTLRQARSPCVGDKFASMHGQKGVVGLLDSQENFPFTCQGIVPDIVINPHGFPTR
QTPGQLLEAALGKGIALGGMTRYATPFTTPSVDVITEQLHKAGFSRWGGESVLNGQNGDR
MQSLVFMGPTFYQRLKQMSEDIVKFRNTGPVHPLTRQPVEEKKRFGGLKFGEMERDCLLG
HGATTNINERLFTLSDPSQLHVCQRCERVANVIVRTDEGRKVHGPYCKFCKSAENIVKIN
VPYGAKLLYQELFSHGIILKFETIAS
NT seq 3681 nt   +upstreamnt  +downstreamnt
atggaagagccagaaacgaaaggcttgcgttcaccaaatggattagatactaagattaat
gtcatggacttcatggttttggatgacgatggggaagggatctttgatgtaaaagagtat
gcaaaagggattctgcatccatctcctgatgccgacggagggcactgtcctatggatgtg
gacttgaaaggaataccatctatggaagatgaagaagaagtgaagtcttcttcaaaccca
cctgcacaagtgccaactgacatcagcgttgaaagcctggagaagttttgcaaagaagcg
gcaagatcattcttcaatgaaagaggactagtcagtcatcagataaactcctataatgat
tttgtcgaccatggactccaggagctctttgattccctgggggaaattaccgttgagcct
gattatgatccttcaaagaatgtaggtggtgtgtggagacatgcaaccatcaagtttggt
agagtgaagcttgagaggccggagttttgggctgacaactgcgatctcgatgagcagaca
ctcattatgaagcctgtacatgcccgccttcagaagatgacatattcttcgaagatgaac
gtagaaatgactgttcaggtttactcacttgggcaaggcgacggatcgaaaaccggaaaa
gaaccatatatcccgaagaaagttatattacctccagaaactaaatgggtcactgttggt
aggttacctgtcatggtgaagtcaaaattgtgctggctgcatgaactcagggaaactgag
tgccagtttgattctggtggatactttataataaagggaatggaaaaggcatttattgct
gaagaacagaaatgcttatccaggatttgggtaagtgacctcaagggctggtatgcctgt
tacttgtctcaaatcaaagaagaaaatgtctatgttaaccttgttcagtctaaagagaat
ggtggtttccacaaagtcattaacctgtccttcttgagtgcgactattcccatatggata
atgttttttgcactgggtgtatcatcagataaggaagcttttgatatgattgacatacaa
gattgtgattcttctttggtaaacataatatcagcaaccataaaagaatctcaggcacaa
tgtgaagccttccgcataggagatagagcccgtcaatatgttgacaagtttatcaaagaa
acaaagtctccaccagaacaaccctttgatggatatgtgggtaagtacctatttcctggt
gtcagtggcaataggtccaaagcaattttcttgggctacatgatgaaacgtctactaatg
gcctactgccgccgctgggaatgtgacaataaatatgatttccggaacaagaggctagat
ctagcatgtcagctgcttcatagagaacttcgagggcatcttaaacgtgcagagaaacac
atggtgaaggtaatgcagagacatttgagtggtgatagtgacttacaagttctcgaacat
tatgttaatgcgtcaactattaccaatggtctgaaccatgccttctccaccggttcctgg
tgccatccatataaatattgtaagtgctcagggattgttgcaacccttatgagaacaaat
ccgcttcaaatgatgtctggcttgaggaagacaagacaattgtcttcatattggggaagt
gctggagatgctagatatccgaatccttcttactggggaaggctatgttttatgtctact
gctaatggtgaaagtggatttgggaagaatctagctgttagtgctgtggttagctctgta
atgagtgcgcccttgcttgacttatttgtttcttgtggaatgaagaaactggatgaagtt
cttgtacaagagcttggcggtacagataagattttcatgaatggaaatttggttggtgcg
tgtgcatacccaagcgaatttgttatgcatctaaggaatatgaggcgtagcaagcaaatt
gatgcacaggtggaaatcaaaagggacaagcaacataaggaagttcgcatcttttctgat
gcagggagaattctaagaccacttcttgttgttgagaatcttaaatgcatcactaaactg
aatgctggatcctactcattgatggaacttatgcagcaaaatataattgagctgattggt
gctgaagaggaggaggatatccaatgtgcttgtggaattagggatctcttttcaggggat
aaaaaagagggtcttttgtactatacccattgtgaacttgacccttctttcttgctaggg
ttgagttgtggtatcattccctttgccaaccacaatgctgccaagagggttttgatggaa
gctaaactatcacaacaggctattggctactcgtctacaaattctcagtatagagttgat
accgtttttcatcaaatgtactatccacagagacccctgttcaaaactgtagtgtctgac
tgtcttggtaagaaagaccatactagaccagagtatttcaatggccaaaatgcaatagtc
tcagtcagtgttcatcaaggatttaaccaagaagactccctggtattcaacagggcttct
ttagagcgtggtatgttccgaacacttcatttcaggagctacaaagcacagacacaaaac
aaagaggtgaccagacgactcaaaaacagggaaaagattgattttggaaaaacccaaagc
aagaaaggacttgtcgatagtctggatgtcgatggcttaccatatgttggagcaaatctt
cgaagtggcgacattgtcatcgggaaggtctcagagtctggtgaagatcatagtgtgaag
cttatgcatactgaaaaagggcatgtagagaaggttgtactatcagctaatgatgatggg
aacaactatgcagttgttactctaagacaggcccgctcaccttgtgtgggcgacaagttc
gccagtatgcatggccagaaaggggttgttggtctgttagattctcaggagaacttcccg
tttacttgccaaggaatagttccagacattgtgataaatccacatggctttccaactcgt
cagactcctggtcagctgcttgaggctgcgttgggcaagggaattgcccttggcgggatg
actagatatgccacaccatttaccactccatcggtggacgtgatcacggagcagctgcat
aaggctggtttctcaaggtggggaggtgagagcgttctgaatggtcaaaacggtgatagg
atgcagtccttggtgttcatgggcccaaccttctaccagaggctgaaacagatgtctgag
gacattgtgaagttccgtaacaccgggccggtgcacccgctcacgaggcagccagtggag
gagaagaagaggtttggcggtctcaagttcggggagatggagcgcgactgcctgctcggc
catggcgccaccacgaacatcaacgagcggctgttcacgctaagcgacccctcacagctg
cacgtctgtcagcggtgcgagcgggtggcgaacgtgatcgtacggactgacgaagggagg
aaggtccatgggccctactgcaagttctgcaagtctgcggaaaatatagtgaagatcaat
gtgccttacggcgcaaagctgctctaccaggagctattcagccacgggatcatcctcaag
ttcgagaccatagccagttag

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