Lolium rigidum (rigid ryegrass): 124691859
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Entry
124691859 CDS
T09103
Name
(RefSeq) lycopene beta cyclase, chloroplastic-like
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00906
Carotenoid biosynthesis
lrd01100
Metabolic pathways
lrd01110
Biosynthesis of secondary metabolites
Module
lrd_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
124691859
Enzymes [BR:
lrd01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
124691859
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GFIT
Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
NAD_binding_8
FAD_binding_2
Pyr_redox
Thi4
FAD_binding_3
FAD_oxidored
HI0933_like
Pyr_redox_3
NAD_binding_9
3HCDH_N
GIDA
Motif
Other DBs
NCBI-GeneID:
124691859
NCBI-ProteinID:
XP_047081093
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Position
2:65422212..65424106
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AA seq
487 aa
AA seq
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MATAALLLRAHHPCNPSPPPPRTAIVCRAMASTAAAAAQALRSMAPPHRPELLSLDLPRY
DPARSRPVDLAIVGGGPAGLAVAQRVAEAGLSVVSIDPSPGLVWPNNYGVWVDEFEAMGL
TDCLDTVWPAASVFIDDATSKSLHRPYARVARRKLKSTMMDRCVAHGVAFHQAKVAKAVH
NEASSLLICDDGVAIPATVVLDATGFSRCLVQYAKPYNPGYQVAYGVLAEVDAHPFDIDK
MLFMDWRDSHLPEGSAIKDRNSRVPTFLYAMPFSPTKIFLEETSLVARPGLAMDDIQERM
AARLKHLGIRIRSVEEDERCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLATA
PIVADAIVRYLDSGTGGVTGGDALAAEVWKELWPTDRRRQREFFCFGMDVLLKLDLPGTR
RFFNAFFDLEPHYWHGFLSSRLFLPELLMFGLSLFAHASNTSKLEIMAKGTLPLAKMVGN
LIQDKDR
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgccgccctcctcctccgcgcccaccacccctgcaacccctcgccgccgccc
ccgcgcaccgcgatcgtctgccgggccatggcgtccaccgccgccgccgcggcccaggcg
ctgcgctccatggccccgccgcaccgcccggagctgctctccctcgacctgccgcgctac
gacccagcgcgctccaggccggtcgacctggccatcgtcggcggcgggcccgcggggctc
gccgtggcgcagcgcgtcgccgaggcgggcctctccgtggtctccatcgacccgtccccg
ggcctggtctggcccaacaactacggcgtctgggtggacgagttcgaggccatgggcctc
accgactgcctcgacaccgtctggcccgccgcctccgtcttcatcgacgacgccacctcc
aaatccctgcaccggccctacgcgcgcgtcgcgcgccgcaagctcaagtcaaccatgatg
gaccgctgcgtggcgcacggcgtcgccttccaccaggccaaggtcgccaaggcggtccac
aacgaggcctcctcgctcctcatctgcgacgacggcgtcgccatcccggccaccgtggtc
ctcgacgccaccggcttctcccgctgcctcgtgcagtacgccaaaccctacaaccccggc
taccaggtcgcctacggcgtcctcgccgaggtcgacgcccacccgttcgacatcgacaag
atgctcttcatggactggcgcgactcgcacctccccgaggggtccgccatcaaggaccgc
aacagccgcgtgcccaccttcctctacgccatgccattctcgcccaccaagatcttcctc
gaggagacgtccctcgtcgcgcgcccgggcctcgccatggacgacatccaggagcgcatg
gccgcgcgcctcaagcacctcggcatacgcatccgcagcgtcgaggaggacgagcgctgc
gtcatccccatgggcgggccgctgcccgtgctgccgcagagggtggtcggcatcggcggc
acggccgggatggttcacccttccacggggtacatggtggcgcgcacgctcgccaccgcc
cccatcgtggccgacgctatcgtgcggtacctcgattccggcactggcggcgttaccggt
ggcgacgctctggccgcggaggtgtggaaggagctgtggcccacggacaggcgcaggcag
agggagttcttctgcttcggaatggacgtcctgctcaagctcgacctcccgggcacgcgc
cgattcttcaacgcattcttcgacctcgagccgcactactggcacggcttcctctcctcc
aggctcttcctgcccgagctcctcatgttcggcctctccctcttcgcgcacgcttcaaac
acctccaagctcgagatcatggccaagggcacgctgcctcttgccaagatggtaggcaac
ttgatacaggacaaggataggtga
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