Lolium rigidum (rigid ryegrass): 124693104
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Entry
124693104 CDS
T09103
Name
(RefSeq) nuclear-pore anchor
KO
K09291
nucleoprotein TPR
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124693104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124693104
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124693104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
124693104
NCBI-ProteinID:
XP_047082514
LinkDB
All DBs
Position
2:232103587..232127382
Genome browser
AA seq
2012 aa
AA seq
DB search
MPLFMSDEELRLLGGDVAAVAERADAAIRELRNQVDTVRAEADAAAIAAEQTCALLEQRF
TALSAEVERYQAEAADRAAASERRDADLASSHAEIHQLRIQAIAKDGEVERLKVEISELH
KSKCQSLELIEQRDIEIREKDGVIKSYYDKILNQADASASKEARIQEAEAKLTHCQSTCD
RIAQEKEILEKHNLWLDEELTTKVKNLADLRKANMDEESRLSAKIAELERENSESTSSLR
RSKERVSELEQRVSYMEKELFSAKDASAANEQRLGTELSTVMKLADLHKESSDEWSKKAG
ELEGVIKALETHLTQVEDDYKEKLEKETLAKIDLEKEVAELKQNIEKCEFDLENARKSGE
LSLVPLTSIAADLADLSDTQMKEMTPNAVNQNDLMIIPRVPSGVSGTALAASLLRDGWSL
AKIYEKYQEATDALRHERWGRRHAEAVLERVLHEIEEKAELILDERAEHERMVEAYALMD
HKLQQALLEHDNFENTIRNLKSELKRWERDHTIADKEISDLTKQVAVLLKECQDIQLRCG
SSLSNVGHGAFSMTIRDGVSNDEGNGHEHMTFNDINGLVQQNVELQNKVHLLSSDLDKKD
MELRESFQVELKRITDAAASRVEKVMKKSEEQAIMIESLHRSVAMYRKLCEEQQKTRSTV
EHISNNLQDDGRKDLMVLFEGSQEVSRKTYEQVSERARKLDEELTKLRTELGSLRSERDK
AVLEAEFARDRLNGYMAEIDHQRKEANSVSLRNAELMHLVVDYEKRLRESIDSMQALEEN
SRKLLMEVSTLKHEKEILVKSERRSLDEVHNLTERVHRLQATIDTIHTTDEVQENARSME
KRNQQEYIKRLERDWAELKKELQEQRDHIRVLTLDKKSAFDGCMKQVEDMRKELQSSWKA
SSDAASRAAVAEAKCSDLEAKLKSKTIIFRDGGHDNSSATQVNDELFRLKEELEKYKEEA
QANKSYMLQYKEISSSNEAALKQMESAYQDYKTESEIAKRSLEDEIAKLRSQLSEIEKRY
VMKCEEAASAIEAKEKEFNTLMNEIVILRNEVTQKVERIENLEIKLASSKSALDEQCKRW
RSAQDNYERQVILQSETIQELTNTSKQLSSLQQEIAILRQTADAQKAENDALRTFGQQEK
IELVKEKDEALKKYNELNDQNRILHNRLEALHVRLAEQERGIAGLSSQRTDSHGEDDLHS
VISYLRRSKEIAETEISLLKQEKSRLQIELESALKSSKEAHELLRSQADSARSSMFKDEE
FKSLQLQVREINLLRESNIQLREENRHNFEECQKFREEVHKAKIEAERLEKVLLEKEADA
EICRKELAMQNIEIANLNQRISELVENSRGVDLNTYETMKLTLRGNSIELERAKNILSER
EVVIKILEEKLAGCQSEFGARERKLTDIEASLRSEIDRQKKLYGSMKKKLEVSAKEKEDS
LLKQIEDLKSSQKTISETATDQVVKEKESRIQTLERMYEREREENKKEKAFRKKNQKAYV
DSLAKLTKEKKQMEELIEKHRQAVKEAIEHYSGQSSQIPSGSAVEQQIRSYFLAAKNWEE
SPNPFEDGSTSQTPLTETSTVDTTTAGRQVATPPRPPTQLKVMEEKSVSTLTRPSTEQRK
LRRPLVRPPLEQRVEEPQADSDTPIVEGSTLQDKGGVALERGSAAVKEKGSMPMDKGGVA
LERGSTLGQEKGGSSLERETSGGVSVLPSSRKRLISSSQVRDDASQGEASDANPPSKKHK
EEFSQGTSEMKNDQSAPEDVTAQAPVVSVDNQDGQQLTEEMDMDQTSIRIEEVEETRDDD
VSPNDDMEEQTGASVDIKSQDTEVDVDNNATDVEDVPVKSEAVVELFDEDQKLEGGKEEG
QIATTTDGEDEREEGELPEESEQQSDSSPLHVDADMSEETGEGEATADRAAVEPDQSPLS
QSAGVDASPSRSPAREPSPSNPAQVGASSEQQNPGAVAETGAKGRVVNLAKKMQTRQEKF
GRISPPPPSSGRSGGRAPPRGRKRGGSGGQSQ
NT seq
6039 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcttcatgtccgacgaggagctccggctcctcggcggggacgtggccgcggtc
gccgagcgggccgacgccgccatccgcgagctccggaaccaggtcgacaccgtccgcgcc
gaggccgacgcggccgccatcgcggccgagcagacctgcgccctcctcgagcagcgcttc
accgcgctctccgccgaggtcgagcgctaccaggccgaggcggccgaccgcgccgccgcc
tccgagcgccgcgacgccgatctcgcatcctcccacgccgagatacaccagctccgcatc
caagcgattgccaaggatggcgaggttgagcgcctcaaagtggagatctcggagctgcac
aagtccaagtgccagtcgctggagttgatcgagcagagggacatcgagatacgggagaag
gatggcgtcatcaagagctactacgataagattctaaaccaggctgatgcttctgctagt
aaagaggctaggatacaagaggctgaagctaagctaactcactgtcagtctacatgtgat
cgcattgcacaggagaaggagattcttgaaaagcataatctctggcttgatgaggaactg
acaacaaaagttaagaatttagctgatctaaggaaagcaaatatggatgaggagtctagg
ttgtcagcaaagattgcagagcttgaaagagagaattctgaatctacaagttccttgagg
cgaagtaaagagcgggtttctgaattagagcaaagagtatcctatatggaaaaggagctg
ttctctgcaaaggatgcttcagctgctaatgaacagcgccttggcactgagctctcaact
gtcatgaaacttgctgaccttcacaaagaaagttctgatgaatggtcaaagaaagcgggg
gaacttgaaggtgttattaaagcattggagacacatctgacccaagtagaagatgactac
aaggaaaagcttgagaaggagaccttagccaagattgatcttgaaaaggaggttgccgaa
ttaaagcagaatatcgagaagtgtgaatttgatctagaaaatgcaagaaagtctggtgaa
ttgagcctcgttccgttgaccagcattgcagcagaccttgctgatttatcagacacacaa
atgaaagaaatgacacctaatgctgtaaatcagaatgacctaatgataattccaagagta
cccagtggtgtttctgggactgcattagctgcttctcttctccgcgatgggtggagtctt
gctaagatatatgagaaatatcaagaagctactgatgctttacgtcatgagaggtgggga
aggagacatgcagaagcagtcctggaaagggtcttgcatgaaattgaagagaaggctgag
cttatcttagatgaacgagctgagcatgagaggatggtggaagcttatgctctaatggat
cacaaattacagcaggcattgttggagcatgacaattttgaaaataccataaggaaccta
aagtcggagttaaaaagatgggaacgcgatcatactatcgcagacaaggaaataagcgac
cttacaaaacaagtcgctgttcttttaaaggaatgtcaagacatacagcttcgttgtggt
tctagtctttcaaatgtaggtcatggtgccttttctatgaccataagggatggcgtgtct
aatgatgaaggcaatggtcatgagcatatgacatttaatgatattaatgggcttgtccag
caaaatgttgagcttcaaaataaagttcacctgctttcttctgatcttgacaaaaaggac
atggaactcagggagagctttcaagttgagctgaagagaatcacggatgctgctgcatcc
agagttgaaaaagttatgaagaaatctgaagaacaagcaataatgattgaatctcttcat
agatctgtggcgatgtataggaagttgtgtgaagaacagcagaagactcgttctactgtt
gaacacatatccaataatcttcaagacgatggcaggaaggacctgatggttctatttgaa
ggatcacaggaggtctcgagaaaaacatatgaacaagtctccgagcgggccagaaaactt
gatgaagagttgactaagttgaggactgagcttgggtctttgcggtctgagcgtgataag
gcagtgcttgaagctgagtttgctcgtgatcgtcttaatgggtacatggcagagattgat
catcagaggaaggaagctaattctgtttcactcagaaacgcggaattgatgcacttagta
gttgattatgaaaaaagactccgtgaaagtatagattctatgcaagctttagaggagaac
tcaaggaagcttttaatggaggtgtctactttaaagcatgaaaaggagattttagtcaag
tcagagagaagatctttggatgaggtccacaatttaaccgagagagtgcaccgtctgcag
gccactattgacacaattcatactactgacgaggttcaagagaatgcaaggtctatggaa
aagagaaatcaacaagagtacatcaaacgacttgagagagactgggctgaactaaaaaag
gagctccaagagcaacgtgatcatattcgagtcctgacacttgataagaaaagtgctttt
gacggctgtatgaagcaggtagaggatatgagaaaggagctgcagagctcatggaaagct
tctagtgatgctgcatcgagggctgctgttgcagaggcgaagtgttccgatttggaggcg
aagctcaaatctaaaacgatcatatttagggatggtggtcatgataactcatcagcaact
caggtgaatgatgagctgttccggctgaaagaggagttagaaaaatacaaggaggaagca
caagcaaataaaagctatatgcttcagtacaaagaaatttcaagctcaaatgaagctgca
ttgaagcaaatggaatctgcataccaggattacaaaacggagtctgagattgccaaaaga
agcttggaagatgagattgctaagttaaggagtcagttgtctgaaatagagaagagatat
gtaatgaagtgtgaagaagctgccagtgcaattgaagctaaagagaaggagttcaatact
ctcatgaatgagattgtgatccttagaaatgaagttacccagaaagtagaacgaattgag
aatttggaaattaaattggcttcatcgaagagtgctcttgatgagcagtgtaagcgttgg
cgcagcgctcaagacaattacgagagacaggttatcctgcaatctgaaacgatacaggaa
ctgacaaatacttctaagcaactatcttcgctgcagcaggaaattgcaattcttcggcaa
acagcggatgcacaaaaggctgaaaatgatgcattaagaacattcggtcagcaagaaaag
atagaattggtaaaagaaaaggacgaggcccttaaaaagtataacgagctgaatgaccag
aacagaattctgcacaatcgactagaagctttgcatgtgcgcttagctgagcaagaacgg
ggtatcgctgggctttcatcgcaacgtactgactcacatggagaggatgatttgcacagt
gtcatcagctacttgcgcagatcaaaggaaattgcagaaacagaaatatcgttgcttaag
caggagaaatcacggcttcagatagaactggaaagtgcattgaagtccagcaaggaggca
catgaactacttcgcagtcaagctgatagtgcaagatcatcaatgttcaaggatgaagag
ttcaagtccctgcagctccaggtgagagaaattaatttgcttcgtgagagcaacattcag
cttagagaggagaatagacacaattttgaagaatgccagaaatttcgtgaggaggttcac
aaggctaaaatcgaggctgaaaggttggagaaagttttactggagaaggaggcagacgct
gaaatatgtagaaaagaactagcaatgcagaacattgaaatagcaaatctaaaccaaagg
atttctgagctggttgaaaatagtagaggcgtcgatttgaacacatatgagaccatgaag
ttgaccttgagagggaattcaattgaacttgagcgtgcaaaaaatattctttctgagagg
gaagttgtcataaaaattttggaggagaagcttgctggctgtcagtctgaattcggagcc
agggaaaggaagctgactgacattgaggctagtttgagatctgaaatcgacagacagaag
aagctctacggctccatgaagaaaaagcttgaagtgtcagcaaaagagaaggaggatagc
cttttgaagcagattgaagatcttaaatctagtcagaaaactatttcggaaactgcaact
gatcaggttgtaaaagaaaaggagtccaggatacagacactggaaagaatgtacgagagg
gagagagaggagaacaagaaagaaaaggcgttcagaaaaaagaatcagaaggcatatgtt
gacagccttgcaaagctaacaaaggaaaagaaacaaatggaggaattaatagagaagcac
aggcaagctgtgaaggaggcgattgagcattattctgggcagtcatctcaaatcccgtct
gggtctgctgtggagcagcaaatccgttcatatttcctcgctgctaagaattgggaggaa
tcacctaacccgttcgaagatggttcaacgagtcagacaccacttactgaaacttccact
gttgatacaactacagcaggtcggcaggtagcaactccaccaaggcctcctactcagctt
aaagtgatggaggagaaatcagtttctactttgaccagaccaagtactgaacaacgtaaa
ctaagaaggccgcttgttcgaccccctcttgaacaacgggttgaagagcctcaggctgat
agtgatacaccaattgtcgaaggttccacattacaggacaaaggtggcgtggcactggag
cgaggttctgcagcagttaaggagaaaggtagcatgccaatggacaaaggtggcgtggca
ctggagcgaggttctacactaggtcaggagaaaggaggatcatcactggagcgtgaaact
tctggtggtgtgtctgtattgccttctagtcgcaaacgtctcatatcgtcatcgcaggtg
agagatgatgcttcacagggagaggctagtgatgccaatcctccatcaaagaaacataag
gaggaattttcacaaggtaccagtgagatgaaaaatgaccaatcggctcctgaagatgta
acggctcaggctcctgtggtgtctgtggacaaccaagatgggcaacagcttacagaagag
atggacatggatcagacgtccattcgaattgaagaggttgaggagacgagggatgatgat
gtgagtcctaatgatgacatggaagaacagacaggtgcatcagtggacattaaaagccag
gatactgaagttgatgttgacaacaatgcaactgacgtggaagatgtgcctgtcaagtct
gaggctgtagtggaattatttgatgaagaccagaaactcgaaggcgggaaggaagaggga
cagattgctacaaccacggacggtgaagatgagagggaagagggggagttgccggaggaa
tccgaacaacagtcggatagtagtcccctgcatgttgatgcagatatgtcagaggagact
ggagaaggtgaggcaactgctgatcgtgctgcggttgaaccagaccaaagccctctatca
caatcagctggagtagacgcctcaccaagcagatctcctgcacgtgaaccttccccttct
aacccagctcaagtgggtgcatcttccgaacaacagaatcctggtgctgtagcagagact
ggtgctaagggtcgggtggtcaacttagcaaaaaagatgcagaccagacaggagaaattt
ggccgcatctctcctccaccaccttccagcggccgcagtggtggccgcgcaccaccacgg
ggacggaagcgtggtggcagtggtggccagtcgcagtga
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integrated database retrieval system
