Lolium rigidum (rigid ryegrass): 124706239
Help
Entry
124706239 CDS
T09103
Name
(RefSeq) protein EXPORTIN 1A-like isoform X1
KO
K14290
exportin-1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03008
Ribosome biogenesis in eukaryotes
lrd03013
Nucleocytoplasmic transport
lrd03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124706239
03008 Ribosome biogenesis in eukaryotes
124706239
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124706239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124706239
03009 Ribosome biogenesis [BR:
lrd03009
]
124706239
03016 Transfer RNA biogenesis [BR:
lrd03016
]
124706239
03036 Chromosome and associated proteins [BR:
lrd03036
]
124706239
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
124706239
Ribosome biogenesis [BR:
lrd03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
124706239
Pre-60S particles
124706239
Transfer RNA biogenesis [BR:
lrd03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
124706239
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
124706239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
BTB
IBN_N
CRM1_repeat
PP28
Motif
Other DBs
NCBI-GeneID:
124706239
NCBI-ProteinID:
XP_047093850
LinkDB
All DBs
Position
4:166118108..166131124
Genome browser
AA seq
1674 aa
AA seq
DB search
MAEKLRDLSQPIDVPVLDATVAAFFGTGSKEERNAAYQILQDLQNNQDMWLQVVHILQNS
QNLNTKFFALQVLESVIKYRWNALPSEQRDRVKNYISDVIFQLSSNEVSFRKERLYVNKL
NIILVQFLKHKWPASWASFISDLVAAAKSSETICENCMAILKLVSEEFFDLSRTEMTSHM
IEELKSSLNSEFRLIHELCLYVLCTPQSSELIRGTLATLRAFLPWIPVGFIFDSPLLETL
LKFFPMAAYRHLTLQCLTEVAALQFGDFYNMQYVNMYTIFMMRLQGILPPRLIPNAYANG
SNDEQAFMQNLALFFTSFFKSHIHILERYPENRDSLLLGLEYLIGISFIDNTEVFKVCLY
YWNAFVSELLQERKKIEPATAAVSMMALQAEMIPRAVDGTSTAVEHRQQLYSGSLSKLRA
LMICRMAKPEEVLIVEDENGNIVRETLKDNDVLVQYKIMKEILIYLTLLDHEDTEQQMLK
KLTKQLNGEDWSWNNLNSLCWAIGSISGSMVEEQENRFLVMVICGLLDLCEITKGKDNKA
VIASNIMYVVGQYPRFLWAHWKFLKIVVKKVFEFMHEMHPGVQDMAFNTFLKIVQKCKRK
FVTQQVGENEPLVSELLFSFTTTFLDLEPHQIHTFYESAGHMIQAELDNTKRDEYLKRLM
GPTNQKWAKIIGQAGQSIDILKNQDVIRSVLNILQTNTSVAAALGPHFLPQISSIFLDML
TVYRMYSELVSSTIAEGGPYASKSSFVKLLRSVKGETLKLIETFLDKAEDLPHLRKQFVP
PMMDPVLGDYARNVSDARESEVLSLFATIINNYKAEMLYDVPRIFDAVFECTLKMITGNI
EDCPEHAVNFFSLLRAIGTHCFKALIQLSSQQLKLLIDSISWAIRRTERNIAETGLSLLL
EILKNFQTSAFQNQFYKTYFLSLEQEIFSVMIDSFHKPGFKLHVLVLQHLFCVVDDLKEP
LWDVSTIEYKSNAVFVREYTTNLVGTSFPNMMAAKVSMFVDGLLSSRHDLTTFESQTKDF
LVQSKEFLAQDNKDIYTDYAHEQIGAYLRGLSGPVAKEIEGYLKELLDPDMLIRRHGMNK
TTAPMNGLFIICMELLDKAFRNAQFAHKKIRLAIQRLQEATDGCMDPKGTIYSAKEISSY
ALSGPLREVENTLNSVREKFAEYVSLVAKKDCETKQFNEYMFEGEEIYGMLKCAISDARY
TSFGIERCLTLERQEEECVYETNEQLQEHLEREEQQWLDDVAEHNKLFTAEGKERIISII
IYAREALVYLEKVAAALLRWSVNQKRLFQLVQQTEEKNIHDADLIGAEAFSTESGRSGYI
TVNNRSTPNGMYLESDPFENGGYKWRLRCYLNGMGDATVGFISCFLLIDPDQYLGDHNVE
ANFEFSFKENFTAVSILQGSKTAAETILCDAHEGSKFRTSSKYGNEKVVRLKFCPDCFTI
QCNIDIDDSSCRTSSMATLLDIGYAADIEFHVSGEKFLAHQFILAAGSPVFFAALCGEMK
ESGGTYTVEEMDPLVFKMMLEYMYSGHVTGINGEETDTLKEILVAADRYDLPGLKLICED
ILTREAHVDPNLWEFARTYNCNHLQHYLMKNEKVDLTIELSRRERFVQGSLCTTDSAKHV
EFLSIEELATTRLQEEGKTDHASKDLDHLTLIWQQREEAAKNHEEEKAVKEEEG
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaagctgagggatctgagccagcccatcgacgtcccggtgctcgacgccacc
gtcgccgccttcttcggcaccggatccaaggaggagaggaatgctgcataccagatatta
caggatctgcagaataaccaggacatgtggctgcaagtggtccacatcctgcagaattcg
cagaatttgaacacgaagttctttgccctccaagtacttgaaagtgttattaagtacagg
tggaacgcgctgccgagtgaacaacgtgatcgcgtgaagaattacatatctgatgtgatt
tttcagctctcaagtaatgaggtttctttccgaaaagagaggctttatgttaataagctc
aacattatattggtgcagtttctgaagcataagtggccagcctcgtgggcatccttcatt
tctgaccttgttgcagcggcaaagagtagtgagacaatatgtgaaaattgcatggctata
ttgaagcttgtaagtgaagagttttttgatctatcaagaactgaaatgacatcacatatg
attgaggaactcaagtcttcacttaacagtgaatttcgtctcatccacgagctatgtttg
tatgtcctatgtacaccacaaagctctgagctgatccgtggtacactggctacgcttcgc
gctttcttaccatggattcctgttggatttatcttcgactcaccgttgctggagacgttg
ctgaagttctttcctatggctgcttatcggcatcttacacttcagtgcctaacagaggtt
gctgctcttcagtttggtgatttttataacatgcagtatgtgaatatgtacacaattttc
atgatgaggttgcagggtattcttcctcctagattaattcccaatgcctatgctaatggt
tccaatgatgaacaagcattcatgcaaaatctggcactctttttcacttccttctttaag
agtcatatacatatactggagcggtaccctgaaaatagagattcattactcctcggtctt
gagtatcttattggaatttcatttattgataacactgaggttttcaaggtgtgtttatat
tactggaatgcatttgtgtcggagttacttcaagaacgcaaaaaaatcgagccggcaaca
gcagctgtaagcatgatggcacttcaggctgagatgattcctagagctgttgatggtact
agtacagctgttgagcataggcagcagctttattcaggctcactgtcaaaattacgagcg
ttgatgatttgtcggatggcaaagcccgaggaggtattgattgtggaagatgaaaatggc
aacattgtacgtgaaacattgaaagataatgatgtccttgtccagtataagatcatgaag
gaaatactgatctatttgactcttcttgatcatgaggatacagagcagcagatgttgaag
aaattgacaaaacaattgaatggggaagactggagctggaataacctcaatagtctttgc
tgggctattggatcaatatctggttctatggttgaggaacaggaaaataggtttttggta
atggtaatttgcggtttgctggatctctgtgaaatcaccaaggggaaagacaataaagct
gtaattgcaagcaacatcatgtatgtagttggccagtatccaagatttctctgggctcac
tggaagtttctgaagatagtcgtgaagaaggtgtttgagttcatgcatgagatgcatcct
ggagttcaggatatggcatttaatactttcctgaaaattgttcagaaatgcaagcgcaag
tttgtgacacaacaggtcggcgagaatgaaccacttgtttctgaactgctgttcagcttt
actacaacctttcttgatctggagccacaccagattcatactttttatgaatcggctggc
cacatgattcaagctgaattggataatactaagagggatgaatacctcaagagattgatg
ggccctactaatcagaaatgggcaaaaattattggccaggcaggccagagcattgatatc
ctgaagaaccaagatgttatcagatctgttcttaacatattacagacaaacacaagcgtg
gcggctgcacttggaccacactttctcccacaaatttcatcaatcttcttggacatgcta
acagtttacagaatgtacagtgagcttgtatcaagcactattgctgaaggggggccttat
gcatcaaagtcgtcatttgtaaagctcttacgatctgtcaagggggaaacattgaaattg
attgagacttttttggacaaagctgaagatctaccgcaccttaggaagcagtttgttcct
ccaatgatggatcctgttcttggtgattatgctagaaatgtttctgatgcaagggaatct
gaagttctgtccctgtttgcaacaatcataaacaactacaaagctgaaatgctttacgat
gttcctcgtatattcgatgctgttttcgagtgtaccctcaagatgattactggaaacatc
gaagattgtccagagcatgctgttaattttttttctttgcttcgtgctattggtacccat
tgcttcaaagcattaattcagctttcaagtcagcaattgaagcttctgattgactcaatt
agttgggcaataagacgtacagagagaaacattgccgagactggccttagtcttttgttg
gaaattctgaagaattttcagacttcagcattccagaatcagttttacaaaacatatttc
ttgagtcttgagcaagagattttctcagtaatgattgattcatttcataagcctggtttc
aagcttcatgttttagtgctacaacacttgttttgcgtggttgatgatctaaaggagcct
ctgtgggatgtttccactatagaatataaatcaaatgctgtgtttgtccgggaatacact
acaaatcttgttgggacatcatttcctaatatgatggctgctaaggtgtcaatgtttgtt
gatgggcttcttagctcaagacatgaccttacaacctttgaaagccaaacaaaagatttc
ctggtgcaatcgaaggagttcttggctcaggataacaaggatatatatacggattatgcc
catgagcaaattggtgcctacttgagggggctatcaggtccagtagccaaagaaattgaa
ggttatcttaaggaattgttggatcctgatatgctgattagaaggcatggtatgaacaaa
acaactgcgcctatgaatgggctatttataatctgcatggagcttctggataaagcattc
cgtaatgcacagttcgcccacaagaagatcagactagctatccagcgcctccaagaagcc
actgatgggtgtatggaccccaaaggtactatttatagtgccaaggagatttcctcgtat
gctttgagtggaccactgagggaagtcgagaacacattgaattctgtgagagaaaagttt
gctgagtatgtgtctttggttgcgaaaaaggattgtgagacgaagcaattcaatgagtat
atgtttgaaggagaggagatatatggcatgttgaaatgtgctatatctgatgccagatat
acatcttttggcatagaaagatgtttgaccttggaaagacaggaagaggagtgcgtttat
gagaccaatgagcaactgcaagagcacttggagagagaggagcagcaatggttagatgat
gtagcggagcacaacaagctgttcacagccgaagggaaagaaagaatcatcagtatcatt
atttatgctcgagaagcattagtttatcttgaaaaagttgcagcagcgcttcttagatgg
agtgtgaatcagaagagactatttcagctagttcagcaaacagaggaaaaaaatattcat
gacgcggatctgattggagctgaggccttttcaactgagagtggaaggagcggctacatc
acggtgaacaacaggtcaacaccaaatggtatgtatttagagtccgatccatttgaaaat
gggggatacaagtggagattgcgatgctatctaaatggtatgggagatgcaactgtaggt
ttcatttcatgttttctgctaattgatccggatcagtacctgggtgatcataatgtggaa
gcaaactttgagttctctttcaaagaaaacttcacagcggtttcaattcttcagggtagc
aaaactgcagcagaaacaatactttgtgatgcacatgagggcagcaaattccggacctct
agtaaatatggtaatgaaaaggtggtccgtctaaaattttgtcctgattgttttacgatc
cagtgcaatattgatattgatgactcaagctgtagaacttcctccatggctacattgctg
gatattggatatgcagctgatatagaatttcatgttagtggagagaagttcttggcacac
caatttattttggctgctggttcaccagttttctttgctgctttatgtggtgagatgaaa
gagagtggcggcacatacactgttgaggagatggatccattggtctttaaaatgatgttg
gagtatatgtattctggtcatgtgactggaataaatggagaagaaacagatacacttaag
gagattttagttgctgctgacagatatgatctgccagggctaaagctcatatgcgaggac
atcctgacaagagaagctcacgttgatcccaatctatgggaattcgctcgaacctataat
tgcaaccatttgcagcactatttgatgaaaaatgaaaaggttgatttgacaattgaactc
tctaggcgtgaaaggtttgtgcaaggttctttgtgtaccactgattctgctaaacatgtt
gaattcctttctatagaggagcttgccactactaggcttcaggaggaaggaaagacagac
catgctagcaaagacttagatcaccttactttgatctggcaacagagagaggaagctgca
aagaatcacgaagaggaaaaagctgtcaaagaagaggaaggctga
DBGET
integrated database retrieval system
