Lolium rigidum (rigid ryegrass): 124706671
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Entry
124706671 CDS
T09103
Name
(RefSeq) cyclin-dependent kinase D-1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03022
Basal transcription factors
lrd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124706671
09124 Replication and repair
03420 Nucleotide excision repair
124706671
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lrd01001
]
124706671
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124706671
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124706671
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124706671
Enzymes [BR:
lrd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
124706671
2.7.11.23 [RNA-polymerase]-subunit kinase
124706671
Protein kinases [BR:
lrd01001
]
Serine/threonine kinases: CMGC group
CDK family
124706671
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
124706671
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
124706671
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
124706671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Motif
Other DBs
NCBI-GeneID:
124706671
NCBI-ProteinID:
XP_047094299
LinkDB
All DBs
Position
4:complement(188126122..188132695)
Genome browser
AA seq
430 aa
AA seq
DB search
MSSGGGGGGDEDAGTKRVADRYLKREVLGEGTYGVVFKAIDTKTGVTVAIKRIRLGKYKE
GVNFTALREIKLLKELKDPNIIELIDAFPYKGNLHLVFEFMETDLEAVIRDRNIVLSPAD
IKSYIQMMLKGLSFCHKKWVLHRDMKPNNLLIGAEGQLKLGDFGLARIFGSPERNFTHQV
FARWYRAPELLFGTKQYGSAVDVWAAGCIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPK
SSQWPDMVYLPDYVEYQFVSAPPLRSLFPMASDDALDLLSKMFTYDPKARITAQQALEHR
YFSSVPAPTKPALLPRPKLKGDSGNDKIPDLNLQGGPVVLSPPRKLRRVSAPDGTESNIH
RAEKAEEIPPTGLRRHTDENMSSQSSRIPMSVDVGVVFGTRPAPRPTLNSADKSRLKRKL
DMDPDFGYAE
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcggcggcggcggcggcggcgacgaggacgccggcaccaagcgcgtggcggac
cgctacctcaagcgcgaggtcctcggagagggcacgtacggagtcgtcttcaaggccatc
gacaccaagactggggtgacagttgcgatcaagagaatccggctagggaagtacaaggaa
ggcgtcaacttcacagcactgagggaaatcaagctgctcaaggagctcaaagatcctaat
atcatcgagctgatcgatgccttcccttacaagggaaacttgcaccttgtgttcgagttc
atggaaacagacttggaagctgtcatacgtgataggaacattgtgttatctccagcggac
ataaaatcatacattcagatgatgttgaaaggtttatccttctgccacaagaaatgggtg
ctacacagggatatgaaaccaaataatttgcttatcggtgctgaaggacagctcaagctt
ggggattttggtctggcgcgcatatttgggagcccagaacgcaacttcactcaccaggtc
tttgcacgatggtatcgagcgccggaattattgtttggcactaagcaatatggatctgcc
gttgatgtctgggctgctggttgtatttttgctgaattgctgcttagacgaccctttctc
cagggttctagtgacatcgaccagcttgggaagatttttgcagcgtttggaactccaaag
tcttctcaatggccagacatggtttatcttccagattatgtcgaatatcagtttgtctct
gctcctccacttcgttcgttgtttccaatggccagtgatgatgctttggatcttctgtca
aaaatgtttacatatgacccaaaagcgaggattaccgctcagcaggctcttgagcacagg
tacttctcatcagtaccagcgccaacaaaaccggctttacttccaagaccaaagctgaaa
ggggactcagggaatgacaagatacctgatctgaacctgcagggtggccctgtcgttctg
tccccgccgaggaagttgcgcagggtgtctgcccctgatgggacagaaagcaatattcat
cgagcagagaaagcagaagaaattcctcctacaggcttgaggcggcatactgatgagaac
atgtccagtcagagttctagaataccaatgtcagttgatgttggagttgtgtttggcaca
cgaccagctcctagaccaacattgaacagtgccgacaagtcacgtttaaaaaggaaatta
gatatggatcctgactttgggtacgcagagtaa
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