Lolium rigidum (rigid ryegrass): 124707230
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Entry
124707230 CDS
T09103
Name
(RefSeq) beta-galactosidase 8
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00052
Galactose metabolism
lrd00511
Other glycan degradation
lrd00531
Glycosaminoglycan degradation
lrd00600
Sphingolipid metabolism
lrd00604
Glycosphingolipid biosynthesis - ganglio series
lrd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
124707230
09103 Lipid metabolism
00600 Sphingolipid metabolism
124707230
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
124707230
00604 Glycosphingolipid biosynthesis - ganglio series
124707230
00511 Other glycan degradation
124707230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrd04147
]
124707230
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
124707230
Exosome [BR:
lrd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124707230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
BetaGal_ABD2
Glyco_hydro_42
Motif
Other DBs
NCBI-GeneID:
124707230
NCBI-ProteinID:
XP_047094850
LinkDB
All DBs
Position
4:229831102..229840104
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AA seq
675 aa
AA seq
DB search
MAAFARRFRELSLLLALALCSALASSVEGETSRRFWIENDAFWKDGEQFQIVGGDVHYFR
IIPEYWKDRLLRAKALGLNTIQTYVPWNLHEPEPRSWEFRGFADIESYLRLAHELEMLVM
LRVGPYICGEWDLGGFPPWLLSIEPALKLRSSDSAYLSLVERWWSVLLPKVAPLLYVNGG
PIIMVQIENEFGSFGNDKRYLHNLVLLARRYLGNDVILYTTDGGTIGTLKNGSIPQDDVF
AAVDFSTGDNPWPIFRLQKQYNFPGKSAPLTAEFYTGWLTHWGESIATTDARSTAKALKD
ILCRNGSAILYMAHGGTNFGFYNGANTGQDESEYKADLTSYDYDAPIKEHGDVQNPKYKA
LRRVIHECTGTPLRPLPDNIERGNYGLVKLQKVASLFDILDKICDPPKVAVSEQPLSMEQ
SGQMFGFLLYFSEYQGIGPYNILSIPKVHDRAQVFVSCSLDGVRNRRYAGTIERWSNKPL
QIPSLSCSSNTSLYILVENMGRVNYGQYIFDKKGILSSVEMDGITLRHWKMYPLSFDALG
VLSKFQPIQQITNARNNKVPIHGDAQNKLRASSFYRNGLSEGPEFYEGHFHIESDSEVKD
TFISFRGWNKGVVFVNNFNIGRFWPAMGPQCALYVPAPILRVGDNVVVIFELHGPNPEHT
INLVEDPDFTCGSNK
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttcgccagacgcttccgggagctctctctccttctcgcgctggccctgtgc
tccgcgctcgcctcctcggtggagggcgagacctcgagaaggttctggatcgagaacgat
gcgttctggaaggacggggagcagttccagatcgtcggcggcgacgtgcactacttccgc
atcatcccagagtattggaaagaccgcctcttaagggctaaggcactaggcttgaacaca
attcaaacatatgttccttggaatttgcatgagccggaaccgcggagctgggaattcagg
ggatttgctgacattgaatcgtatctaagacttgctcatgaattagaaatgctggtcatg
cttcgtgttggtccatatatttgtggagaatgggatcttgggggatttccaccttggttg
ctcagtatagaaccggcccttaaactgcgatcatcagattcagcctatctttccttggtg
gagagatggtggagtgtattactcccaaaagtagcaccactattatacgtcaatggaggt
ccaattatcatggtgcagatcgaaaatgaatttggttcatttggaaacgacaagagatac
cttcataaccttgttctactggccagacgatatctggggaatgacgttattctgtataca
actgatgggggcaccattggtaccttaaagaatggctcaattcctcaagatgatgttttt
gctgctgttgatttttctactggtgataatccatggccaatattcagattacagaagcaa
tacaactttccaggaaaatcagccccgttaaccgcggaattttataccggatggctaacg
cactggggtgaaagtattgcaacaacagatgctaggagcacagctaaagcactgaaagat
attttgtgccgcaatggttctgctatactttatatggctcatggtgggaccaattttggg
ttttacaatggggcaaatacgggtcaagacgagtctgagtacaaggctgacctcacttct
tatgattatgatgcgcctattaaggagcatggagacgtgcagaatcctaaatacaaagca
ctgagaagagtaatacatgaatgcactggcactcctcttcgccctctccctgacaacatt
gaaagaggaaattatggtcttgtgaagttgcaaaaggttgcttctttgtttgatatactt
gataagatttgtgatccaccgaaagtggctgtttcagagcagccactttctatggaacag
tcagggcagatgtttgggtttctactgtacttctcggaataccaaggaataggtccttac
aacattctatcaattccaaaggtacatgacagagcccaggtttttgtgtcctgctcactt
gatggcgtcagaaatcgaagatatgctggaactattgagagatggtctaataaacccctt
cagataccaagcttaagctgctcatctaacactagcttatatatcctggtagaaaatatg
ggccgcgtaaattacggtcaatatatttttgacaagaagggaatactatcttctgttgaa
atggatggcattactctccggcactggaaaatgtatcctctatcatttgatgcactgggc
gtcctttcaaaattccaaccaatccagcaaatcactaatgccagaaataataaagttccc
attcatggtgatgcacaaaataagttacgtgcttcgtcattctatcgaaatggcctttcg
gaagggccagaattttatgaaggccatttccacattgaatctgatagtgaagtaaaggat
acattcatatcatttcgtggttggaacaaaggggttgtttttgtgaacaacttcaacatt
ggaaggttctggccggcgatgggaccacaatgtgctctttatgttcctgcgccaattctc
agagttggcgacaacgttgtggttatatttgaactgcacggtccaaatcctgagcatact
atcaacttagtagaagacccagattttacatgcggttcaaataaatga
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