Lolium rigidum (rigid ryegrass): 124708010
Help
Entry
124708010 CDS
T09103
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124708010
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lrd01009
]
124708010
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124708010
03036 Chromosome and associated proteins [BR:
lrd03036
]
124708010
Protein phosphatases and associated proteins [BR:
lrd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
124708010
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
124708010
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
124708010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
HEAT_EZ
Vac14_Fab1_bd
Htt_N-HEAT_1
PDS5
SCD
CLASP_N
Cnd1
Adaptin_N
TAF6_C
CEP104-like_TOG
DUF3102
Motif
Other DBs
NCBI-GeneID:
124708010
NCBI-ProteinID:
XP_047095657
LinkDB
All DBs
Position
4:41857479..41863801
Genome browser
AA seq
587 aa
AA seq
DB search
MATVDQSLYPIAVLIDELKNEEIPLRLNSIRKLSTIARALGEERTRKELIPFLSENNDDE
DEVLQAMAEELGVFVPYVGGVEHAHVLLPPLETLATVEETCVRDKAVESLCRIGAQMKEK
DVVDYFVPVVTRLASGEWFTARVSSCGLFHIAYPSAADQLKSELRIVYGHLCQDDMPMVR
RAAASNLGKFAATVEQSHLKKEIVSIFDNLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAAGPEPTRADLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPQVAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDEVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLARQLGVGFFDDKLGALCMQWLEDKVYSIREAAANNLKRLAEEFGPEWAMQHIIPQV
LEKINNPHYLYRMTILQAISLLAPVMGPEITCQTLLPVVVNSSKDRVPNIKFNVAKVLQS
LVPILDQSLAEKTLKPCLVELSEDPDVDVRYYAKQALQACDQIMVSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctacggtggaccagtctctgtatccgatcgcggtgctgatagacgagctcaagaac
gaggagatcccgctgcgtctcaactccatcaggaagctctccacgatcgcgagggcgctc
ggggaggaacgaaccaggaaggagctgatccctttcctcagcgagaacaacgatgacgag
gacgaggtgcttcaggcgatggctgaagagcttggcgtgttcgttccttatgtcgggggt
gtagagcatgctcacgttctgctcccaccgctggagacgctggctacggtggaggagact
tgtgtccgggacaaagcggtcgagtcgctgtgccgtatcggtgcgcagatgaaggagaag
gacgtcgttgactatttcgttccagttgtgacgaggctagcatctggggagtggtttacg
gctagagtatcatcctgtggtcttttccatatagcctatccaagtgccgccgaccagttg
aaatcagagctgagaatcgtttatggccatttatgccaagatgacatgcctatggtcaga
agggcagcagcatcaaatcttgggaagtttgctgccacagttgaacagagccatttaaag
aaggaaatcgtctcgatatttgataatttaacccaagatgatcaagattcagtacgtttg
ttggcagttgaaggctgtgccgccctcgggaagttgttggaaccccaagattgtgttgca
catatacttccggtcattgtcaatttctcccaggataagtcttggcgtgtccgttatatg
gttgccaatcaattgtacgaactctgcgaggctgctggccctgagcctacaagagcggac
ctggtgcctgcatatgttcgccttcttcgtgataatgaggctgaagtacggatcgcagct
gctggaaaagttactaagttctgcaggatattaagcccgcaagttgcgattcagcatatc
ctaccgtgtgttaaggagttatcatcagattcgtctcagcatgttcgctcagctttggct
tcagtcattatgggaatggcccctgttttggggaaggatgcaaccattgagcaacttctt
cctatttttctttctttgctcaaggatgaatttcctgatgttcgactcaacataatcagc
aaacttgatgaagtgaatcaggtcatcggaattgacttgctgtcacaatctttattgcca
gccattgtagaactagcagaggatagacactggagggtccggcttgcaataatcgagtac
atccctctgttggccaggcagttaggtgttggattttttgatgacaagctaggagcactt
tgcatgcaatggttggaggataaggtgtactcgattagagaagctgccgcgaacaacttg
aagcgcctggcggaggagtttggtcctgagtgggcaatgcagcatataattcctcaggtg
ctggagaagataaacaacccgcattacctgtaccgcatgaccattctgcaagccatctca
ttgctagcccctgtcatgggcccagagataacatgccaaacgctgctccccgtcgtcgtt
aattcctcaaaggacagggtgcccaacatcaagttcaacgtggccaaggtcctgcagtcg
ctcgtaccgatcctcgatcagtccttggctgagaagactttgaagccctgcctggtggag
ctcagcgaggaccctgacgtggacgtgaggtactacgcgaagcaggccctccaggcgtgc
gatcagatcatggtgtcgagctaa
DBGET
integrated database retrieval system
