Lethenteron reissneri (Far Eastern brook lamprey): 133341829
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Entry
133341829 CDS
T09663
Symbol
DNMT1
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1 isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj00270
Cysteine and methionine metabolism
lrj01100
Metabolic pathways
Module
lrj_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
133341829 (DNMT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrj03000
]
133341829 (DNMT1)
03032 DNA replication proteins [BR:
lrj03032
]
133341829 (DNMT1)
03036 Chromosome and associated proteins [BR:
lrj03036
]
133341829 (DNMT1)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
lrj02048
]
133341829 (DNMT1)
Enzymes [BR:
lrj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
133341829 (DNMT1)
Transcription factors [BR:
lrj03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
133341829 (DNMT1)
DNA replication proteins [BR:
lrj03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
133341829 (DNMT1)
Chromosome and associated proteins [BR:
lrj03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
133341829 (DNMT1)
Prokaryotic defense system [BR:
lrj02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
133341829 (DNMT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAH
DNA_methylase
DNMT1-RFD
DMAP_binding
zf-CXXC
Motif
Other DBs
NCBI-GeneID:
133341829
NCBI-ProteinID:
XP_061406583
LinkDB
All DBs
Position
12:complement(6635627..6692006)
Genome browser
AA seq
1583 aa
AA seq
DB search
MALTLPDDVRERLAELEERFRTECLTEKGYMKKKLGLVQPFLSGEVKTQLETLQEELKEE
DITEKGYFNKVKTLLLRELPKLEEEGSEKPHQNGAAKNGKVKHGKNGTTHHAATAATTST
ACKTESVEANGDEAATENGDAHPAMANGSPECSGKAVANGDGLVLVKSDAEMDDGDVEGD
DAEPASSSSSSSSAASAGKTRGRKKKQAVEAESSSGAELASPRGRGGQRGRKSGAAAGSS
QQSIASMFGKGSVKRKSEEANGKVKEEVIQDSQTKEEGLEDKRRKVELLAEKPLLLSDAP
ESSPAKFKPARTPPPKCTECKQFLDDRDLKLFQGDPDDALDEPEMLTDERLSVFESNSDA
MESYDDLPQHKVTNFSVYDRKLHLCAFDTGLVEKNVELYLSGVVKPIYDENPCNDGGVSA
KKLGPINSWWTTGFDGGEKALVGITTAFADYILMNPSEEYASTFAVMQEKIYMFKIVIEF
LQHNRDATYEDLLNKIETTVPPCGLSFTRFTEDSLLRHAQFIVEQVESYDEAGDEDEPPI
IITPCMRDLIKLAGVTLGKRRAQRRQTIKHPTKIAKDAKGPSKATTTLLVRQIFDEFFDE
QIEQRDKENVIKRRRCGVCEVCQQQDCGKCSTCKVMPKFGGIGRFKQACMNRKCPNMAVK
EAEEDENFEESDSEEVNKVHQKKVTDIKKKKKSKSQISWIGEPQKTETERKYFQRVRLDD
EELGVGDCVVVCPDDPSKPLFPARITSMWEEENGEKWFHPHWFCRGPDTVLGETSDPLEL
FLVDECEDMLLSYVYGKVSVTYKAPSPNFFMEGGMETEEEKTSKDDEEKSFFYQLWYDPE
YARFESPPEVMPSEENKFKFCASCVRLSDLNQRETPCVQTRLDNPEDDAIVTYMLALKDG
VDYRVGDGVYLMPDAFNFSVKPASPVKRAPRKEDIDEEVHPEYYRKSSDYIKGSNLDAPE
PYRVGRISQIFCNKRNNRETDIKFKINKFYRPENTHKGISAAFHGDVNLLYWSDEETVVE
FRNVQGKCRVEYGEDLPESVAEYSQGGPDRFYFLEAYNAKTKSFEDVPYNARSAGCRGKG
KGKGKGKGKGKVSVEHSVEKEPEEKVRKLRGLDVFSGCGGLSEGFHQAGITETKWAIEMW
EPAAQAFRLNNPGSTVFTEDCNILLKLVMSGEKTNGLGQRLPQKGDVELLCGGPPCQGFS
GMNRFNSRTYSMFKNSLVVSYLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRM
GYQCTFGVMQAGQYGVAQTRRRAIILAAAPGEKLPFYPAPLHVFAPRACQLSVVVGDKKY
VSNVTKVSSAPFRTITVRDTMSDLPEIRNGASALEISYNSEPQSWFQRQIRGMQYQPILR
DHICKDLSPLVEARMRYIPLAPGSDWRDLPNIEVRLSDGTTSKILRYTHHDRKNGKGSAM
LRGVCSCSEGKPCDSADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEP
MGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNTLDKHRQVGNAVPPPLAKAIGLEI
KKCVEQSRKSELAKNAVKMDTSS
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcacgctccccgacgacgtgagggagaggctcgcagagttggaagaacgcttt
cggacagaatgtttaacagagaagggatacatgaagaaaaagctgggcctggtgcaacct
tttctttctggagaggtgaaaacgcagctggaaacgttgcaggaagagttgaaggaggaa
gacatcacagagaaggggtacttcaacaaagttaagacccttctccttcgggagcttcca
aagctggaggaagaaggctcggaaaagccccaccaaaatggtgctgccaaaaacggcaaa
gtgaagcacggaaagaatgggaccacgcaccatgccgccactgccgccaccacctccact
gcctgcaaaacagaatctgtggaggccaacggggatgaggcggcaacagagaatggagac
gcgcatcccgcaatggccaatggctcgcctgaatgctccggcaaggcagtagccaacggt
gacgggcttgtgctcgtcaagtccgatgcggagatggacgatggggacgtggagggagat
gatgctgaacctgcgtcgtcgtcgtcatcgtcctcctcggcggcctctgccgggaaaacg
cggggtcgcaaaaagaagcaggcggtcgaagcggagagcagcagtggcgcagaactcgca
agtccccgtggtcgaggtggtcagcgtggccgcaagtcgggggcggcagctgggagcagc
cagcaatccatcgcttcaatgtttggcaaagggtctgtaaaacgcaagtcggaggaggca
aatggaaaggtgaaggaagaagtcattcaagattcccagactaaagaggagggtctggag
gacaaaaggagaaaagtggaattgcttgctgaaaagccactattgctgtctgatgcacct
gaaagttcacctgcaaagttcaaaccagcaaggaccccaccaccgaagtgtacggagtgt
aagcagtttctggatgaccgtgacctgaaattgtttcaaggagacccagatgatgcactg
gatgagccagagatgcttacggacgagcgactctcggtgtttgaaagcaactcggatgcg
atggaaagctacgatgacctacctcagcacaaagtcacaaacttcagcgtgtacgaccgc
aagctgcacctgtgcgcattcgacaccggactcgtggaaaaaaatgtggagctttatctg
agtggagtcgtcaagcctatttatgatgagaatccctgcaatgatggtggtgtgagtgcc
aagaagctgggtcccattaattcatggtggactactgggtttgatggaggagaaaaggcc
cttgttggcatcaccacggcatttgccgactacatcttaatgaacccaagcgaggagtac
gcctcgacgtttgctgtgatgcaggagaagatctacatgttcaagatcgtcatcgagttc
ctgcagcacaaccgggatgccacctatgaggacctgctcaacaagatcgagacgacggtg
cccccgtgcggccttagcttcacgcgctttacggaggactcgctgctgcgccacgcgcag
ttcattgtggagcaagtggagagctacgacgaggcgggagacgaggacgagccgcccatt
atcatcacgccctgcatgcgcgacctcatcaagctggccggcgtcacactcgggaagcgg
agagcccagcgtaggcagaccattaagcacccgacaaagatcgccaaagacgccaagggc
cccagcaaggccaccaccacgctgctcgttcggcagatcttcgacgagttctttgatgag
cagatagagcagcgggacaaggagaatgtgataaagcgccgccgctgtggggtctgcgag
gtgtgccaacaacaagactgtgggaaatgttcaacctgcaaggtcatgcctaaatttggc
ggaattggacgcttcaagcaagcctgcatgaaccggaagtgtccaaatatggccgtgaag
gaggctgaagaagatgagaactttgaggagtccgactcggaggaggtgaataaggtccat
cagaagaaagtgacagacatcaagaaaaagaagaagtccaagtctcagatttcatggatt
ggagagcctcagaagacggaaaccgaacgcaaatacttccagcgtgttcgtctggatgat
gaggagctgggtgttggagactgtgtggtcgtgtgtccagatgacccttctaagcctctc
ttcccagccaggatcacgtccatgtgggaagaagagaacggggagaagtggttccaccca
cactggttctgccgcggcccggacacggtgctgggggagacatcagacccgctggagctc
ttcctggtggatgagtgcgaggacatgttgctgtcgtacgtgtacgggaaggtgtccgta
acgtacaaggccccttcgccaaactttttcatggagggtggcatggaaacagaagaagaa
aagaccagcaaagacgacgaagagaaatctttcttctaccagctgtggtacgacccggag
tacgcgagattcgagagccctcccgaagtgatgccttctgaggaaaacaaattcaagttt
tgcgctagctgcgtgcggctgtcggacctgaaccaacgggagacgccgtgcgtgcagacg
cgattggataacccggaggatgacgcgatcgtgacgtacatgcttgcgctcaaggacggt
gtcgattaccgagtcggggatggggtctacctcatgcctgacgccttcaacttcagcgta
aagccagcatcgccggtgaagcgcgctccacggaaggaggacattgatgaggaggtacac
ccagagtattaccgcaagtcgtcggactacatcaagggcagcaacctggatgctcccgag
ccttaccgtgtgggccgcatctcgcagatcttctgcaacaaacgcaacaaccgcgagacg
gacatcaagtttaaaatcaacaaattttacaggccagagaacacgcacaagggcatcagc
gcagcattccatggtgacgtgaacctgctgtactggagcgacgaggagactgtcgtggag
ttccgcaacgtgcagggaaaatgccgcgtggagtacggagaggacctgcccgagtctgtg
gccgagtactcgcagggagggcccgaccgcttctacttccttgaggcatacaatgccaag
acaaagagctttgaggatgttccttacaatgcacgcagtgcaggctgcagagggaagggc
aaaggcaaaggaaaaggcaaaggcaaggggaaggtgagtgtagagcactcggtggaaaag
gagcctgaggagaaggtgaggaagcttcggggtctggacgtcttctcgggctgtggtggc
ctctcggagggcttccaccaagcaggcatcacagagactaagtgggccatcgagatgtgg
gagccagccgcgcaggccttccgtctcaacaacccgggcagcacggttttcacggaggac
tgcaacattctgctaaagctggtcatgtcaggagagaaaaccaacgggctaggccagcgg
ctgccgcagaagggcgacgttgagctcctgtgtggcggtccgccctgccagggcttcagt
ggcatgaaccgattcaactctcgcacgtactccatgttcaagaactcgctcgtcgtttcc
tatctcagctactgcgactactaccgtccgcgtttcttcctgctggagaatgtgcgcaac
tttgtgtccttcaagcgctccatggtgctgaaactcacgctgcgctgccttgtgcgcatg
ggatatcagtgcacgtttggcgtcatgcaggctgggcagtacggtgtggcgcagacgcgg
cgcagggcgataatcctcgcagccgccccaggagagaagctgccgttctaccccgcgccc
ctgcatgtgttcgccccgcgcgcctgccagctcagcgtcgtggtcggcgacaagaaatac
gtcagcaacgtcaccaaggtgtcctctgctccgttccgcacaatcaccgtacgggacacc
atgtcggaccttcccgagattcgcaacggagcctcggcgcttgagatctcctacaacagc
gagccacagtcctggttccagcggcagatccgtggcatgcaataccagccaatactgcgc
gaccacatctgcaaggacctgagcccacttgtggaggcacgcatgcgttacatcccgctg
gcgcccggctcggactggcgtgacctgcccaatatcgaggtgcgactgtccgacggcacc
acctccaagatcctgcgctacacgcaccacgaccgcaagaacggcaagggctcagcgatg
ctgcgcggagtctgctcctgctccgagggcaagccgtgtgactccgcggaccggcaattc
aacacattgatcccctggtgcctgccgcacacgggaaatcggcacaaccactgggccggt
ctgtatggacggctcgagtgggatggctttttcagcacgaccgtcaccaaccccgagcca
atgggaaagcagggtcgcgtgctgcatcccgagcagcacagggtggtgagcgtgcgggag
tgcgcgcgctcacagggcttccccgacacctaccgcctgttcgggaacaccctggacaaa
cacagacaggttgggaatgcagtgccaccacctctggcaaaagcaattggactggagatc
aaaaagtgtgtggagcagtccagaaagagcgagctggctaaaaatgctgtgaaaatggac
acgtcttcctga
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