Lethenteron reissneri (Far Eastern brook lamprey): 133342687
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Entry
133342687 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04510
Focal adhesion
lrj04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133342687
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133342687
BRITE hierarchy
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
DUF4715
Motif
Other DBs
NCBI-GeneID:
133342687
NCBI-ProteinID:
XP_061407994
LinkDB
All DBs
Position
15:complement(10132225..10200560)
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AA seq
1822 aa
AA seq
DB search
MTPTLTAALLLWAGMCSLARGQQPDLPTSCTEGSCHPATGDLLLGREDRLSATSTCGMTA
PQQYCIISHLMEDDKCFVCDSRQRQGPNSHRVQNVVMNFDPARKSAWWQSENGLERVSLR
LDLEAEFHFTHLIFTFKTFRPAAMLVERSSNFGRTWRPYRYFAQDCRSAFPGVREGPLQR
AGDVVCDSRYSDIEPSTGGEVIFKVLDPSIPVPDPYSPEIQDLLRVTNLRVNFTALHTLG
DERLDFSPDARRKYYYSVYDMVVRGSCSCNGHAESCVPTGRGDAGASTEGMVHGRCLCKH
NTVGLNCDECDDFYQDHPWRPAQGRRTHACKRCECNGHATRCHFDLAAYVASGNVSGGVC
DGCRDNTAGRQCETCAPFHYRHARRDARAPDSCVPCDCDPAGSQEGGACDATSDPRTGTV
AGQCRCKPGVGGVRCDECLPGFAGTPSRDNPNGCQPCRCNVMGTVMNMGKCDPVTGACIC
KDYVGGRNCERCLAGYWGLSESAGGCQPCDCDFGGSVDETCSAEDGQCQCRPHMLGRRCE
EVQPGYYCMPLDLYAYEAEDATFLPVQPLHGGSVGNTSDCDEFMQVPGHNSPGGPGSSAK
LPVVVVAGSAAPGTLVTWTGSGYARIRDGAGLEFTVSNIPYSGEYTVAIRYKPELNEPWE
AQVQVLSQSLPTQSRCANMLPSDEMQIVPLNPTQSVASMPVAVCLETGVRYVVRVVVQRA
RSTRRHPNAHMLVDSLVLFPYVPSLPGFSGSAGQKRREELERYMCLDAYRDATRPMLAEA
CRPLVCAISSILHNGPLPCECNPQGVTSSVCEVLGGHCLCRPNVIGRRCDACSPGTFGFG
PEGCQRCACDPAGTTGGSCDAASGQCLCLPGVAGRECARCDSGRFGFPRCTPCQCNGRAR
DCDPESGRCHECLEHSTGENCDRCEPGYYGDPRLGSGGRCRPCPCPGEPGSGRFFATTCS
TDPTTRGAVCQCLPGYTGEHGAGLRCEACAPGFSGDPSVAGRPCSSCDCSGNVDPRDPKA
CDPVSGRCQRCLHNTHGERCEKCRTGFYGDALRQDCKPCSCIEAGTEPASCPGGAQPCRC
DARTGQCRCRAGVEGSSCDRCAPGHWGLGSSGGCQPCACNPARARGQTCNQVTGQCECRP
GFGGRTCDDCGPNHWGSPDKGCKPCDCHPQGGTCDAASGACVCRDGVTGARCDACSRGAA
GDFPACKPCHACFSWWARKIEALCARATALRDRAEKLADTGISGAYDGRFEELEKKLKEA
QDIIAKGNERPSDVARLEMLRDNIRRQLDRLTQLVSVAEASVKSLQGQRDRTDLDLDALE
RDALRLNASAALAYSRLQGILNSDFSGDFDSIRRSWQDSRNAQKQAETAAGGPSGPVRAS
QKARRRAEDLMRHGGGAPGDPSLAERLANSKRSLDELDREVAALSVKRINEKTCGAPGDL
PCSESRCGGGGCRDSAGRPACGGPGCGGSLTLAQDSLARAHNAELEVKRASAELDKMATK
VADVKREASDMRDKAQRSLDRAQQSKAGMEHAVAELRDLIARIKEFLNEEGADPESIMLV
ANNVLKLGLPVTPGEAEALAQQIRDSVARLSDVDAILAQTAKNMTLAQRLLAEAKKAKAD
AEAVKQKTEEVVQALQEANDAQSAAQAAINNAQRDIDSAKDRIDEAGKKAGDAGAILMDA
MDRLTKMAADVQALKEKAAANQLAAKDAATQAAQARVNADVAADELQEVKDKFKEMQGLM
NSRSNGSDKARERAEKLHDQASQLLQDVQDKMKRLNDLEKLLESQADKLVDATGKLDGLE
ERASKLQKEISKRVQHYFSCQN
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccaccctcaccgcagctctcctgctgtgggcaggcatgtgtagcctggcgcgg
gggcagcaaccagacctgcccacgagctgcacggagggcagctgccacccggcgacggga
gaccttctcctgggccgcgaggaccgcctctccgccacgtccacgtgcggcatgactgcg
ccacagcagtactgcatcatcagccacctcatggaggacgacaagtgcttcgtgtgcgac
tcgcggcagcgccagggccccaacagccaccgcgtccaaaacgtcgtcatgaacttcgac
cccgcgcgcaagagcgcgtggtggcagtcggagaacggcctggagagggtgagcttgcgg
ttggacctcgaggcggagttccacttcacgcacctcattttcacgttcaagacattccgc
ccagcggccatgctggtggagcgttcgtccaacttcgggcgaacgtggcggccgtaccgc
tacttcgcgcaggactgccgctctgccttccccggcgtgcgagaggggcccttgcagcgt
gccggcgacgtcgtgtgcgactcccgctactccgacatcgagcccagcacgggcggggag
gtcatcttcaaggtgcttgatccgtccatccctgttcctgacccctacagccctgagatc
caagacctgctgcgcgtgacgaacctgcgcgtgaacttcacggcgctgcacaccctcggg
gatgagcgcctggacttcagccccgacgcgcgccgcaagtactactacagcgtgtacgac
atggtggtgcggggcagctgctcctgcaacggccacgccgagtcgtgcgtccccaccggg
aggggcgacgccggcgcttccaccgagggcatggtgcacgggcgctgtctgtgcaagcac
aacacggtgggactcaactgcgacgagtgcgacgacttctaccaggaccatccctggagg
ccggcgcaggggcgacgcacgcacgcgtgtaaacgctgcgagtgtaacggccacgccacg
cgctgccacttcgacctcgccgcctacgtcgccagcggcaacgtgagcggcggggtgtgc
gacggttgccgcgacaacacggcggggcggcagtgcgagacgtgcgcgcccttccactac
cgccacgcgcggagggacgcacgcgcccccgactcctgcgtcccgtgcgactgtgacccg
gccggctcgcaggagggcggtgcttgcgacgcaacctccgacccccgtacgggcaccgtg
gcggggcagtgccgctgcaagccgggcgttggaggggtgcgatgcgacgagtgtttgccc
gggtttgccggcacgccctcccgcgacaaccccaacggctgccagccgtgcaggtgcaac
gtgatggggaccgtcatgaacatgggcaagtgcgatcccgtcacgggcgcctgcatctgc
aaggactacgtgggcggcaggaactgcgagcggtgcctggccggctactgggggctcagc
gagtcggccggcggctgccagccgtgcgactgcgacttcgggggctccgtggacgagacg
tgctccgcggaggacgggcagtgccagtgccgcccccacatgctggggcgccgctgcgag
gaggtgcagcctgggtactactgcatgccccttgacctgtacgcctacgaggccgaggac
gccacgttcctgcccgtgcagccgctacatggaggctctgtcgggaacacgtcggactgt
gacgagttcatgcaggtcccgggccacaacagtccgggcggtcccggctccagcgccaaa
ctcccggtggtggtggtggccgggagtgccgcgcccggcacgctcgtcacgtggacgggg
tccggctacgcacgcattcgcgacggcgccggccttgagttcaccgtcagcaacattccc
tactcgggcgaatacacggtggccatccgctacaagccggagctgaacgaaccgtgggag
gcgcaggtccaggtgctgtcccaatcgttgcccacgcagagccgctgtgccaacatgctc
ccgtccgacgagatgcagatcgtgcctctcaaccccacgcagagcgtggcgtcgatgccc
gtggccgtgtgtctggagacgggcgtgcggtacgtggtgcgggtggtggtgcagcgggca
cggtccacgcgcaggcaccccaacgcgcacatgctcgtcgactcgctggtgctgttcccg
tacgtcccatcgctgcctgggttctcgggcagcgccggtcagaagcggcgcgaggagctg
gagcgctacatgtgcctggacgcgtaccgcgacgccacgcggcccatgctggccgaagcc
tgccgccccctcgtgtgcgccatctccagcatcctgcacaacgggcccctgccgtgcgag
tgtaacccccagggcgtgacgagctccgtgtgcgaggtgctcggcggccactgcctgtgc
cgccccaacgtcatcggccggcgctgcgacgcctgcagcccggggaccttcggcttcggg
ccggagggctgccaacgctgcgcgtgcgaccccgccggcaccacggggggctcgtgcgac
gcggcgagcggccagtgcctgtgcctgccgggcgtggcggggcgcgagtgcgcgcgctgc
gactcgggccgcttcggcttcccgcgctgcaccccctgccagtgcaacggccgagccagg
gactgcgaccccgagagcggtcgctgccacgagtgcctggagcattccaccggagagaac
tgtgacaggtgcgagcccggttactacggcgacccgcgcctgggctccggcgggcggtgc
cggccgtgcccgtgccccggcgagccgggcagtggccgcttcttcgcgacgacgtgcagc
acagaccccacgacgcgcggcgcggtgtgccagtgcctcccggggtacacgggtgagcac
ggtgccggactgcggtgcgaggcctgtgccccgggcttcagcggcgacccgtccgtggcc
gggcggccgtgctcatcgtgcgactgcagcggcaacgtggacccgcgcgaccccaaggcg
tgcgaccccgtgagcggccgctgccagcgctgcctgcacaacacgcacggcgagcgctgc
gagaagtgccgcaccggcttctacggcgacgccttgcgacaggactgcaagccctgcagc
tgtattgaggccggcacggagcccgccagctgccctggcggtgcgcagccgtgccgctgc
gatgctcgcaccgggcagtgccggtgccgggctggcgtcgagggcagctcgtgcgaccgc
tgcgcgccgggacactggggcctggggagcagcggcggctgccaaccgtgcgcctgcaac
ccggcgagggctcgcggccagacctgcaaccaggtgaccgggcagtgtgagtgtcgccca
gggtttggaggtcgcacgtgcgacgattgtggccccaaccactgggggtctcccgacaag
ggatgcaagccgtgcgactgccacccccagggcggcacgtgcgacgccgcgagcggcgct
tgcgtgtgccgcgacggcgtgacgggcgcgcgctgcgacgcgtgctcccgcggcgcggcc
ggcgacttcccggcctgcaagccgtgccacgcgtgcttctcgtggtgggcgcgcaagatc
gaggccctctgcgcccgcgccaccgccctgcgggaccgcgccgagaagctcgccgacacg
gggatctccggcgcctacgacggccgatttgaggagctggagaagaagctgaaggaggcg
caggacatcatcgccaagggcaacgagcggcccagcgacgtggcgcgcctcgagatgttg
cgcgacaacatcaggcggcagctggatcgtctgacgcagctcgtctcggtggccgaggcg
tccgtgaagtctctgcagggtcagcgcgaccgcaccgacctcgacctggacgctctggag
cgcgacgccctgcggctcaacgcgtcggctgccctggcctactccaggctgcagggcatc
ctcaactctgacttcagcggcgacttcgacagcatccggcgctcgtggcaagactcgcgc
aatgcccagaagcaggcggagacggcggccgggggaccgtcggggcccgtgcgtgcctcc
cagaaggcccggcggcgcgcggaggacctgatgcggcacggcggcggcgcccccggcgac
ccgtcgctggccgagcgtctcgccaacagcaagaggagcctggacgagctggaccgcgag
gtggcggcgctgagcgtcaagcgcatcaacgagaagacgtgcggcgcccccggcgacctg
ccatgctccgagtcgcgctgcgggggcggcggctgccgggacagcgcgggccggccagcg
tgcgggggccccggctgcggcgggtccctgacgctggcgcaggactcgctggcgcgtgcc
cacaacgccgagctcgaggtcaagagggcgtcggcagagctcgacaagatggccactaag
gtggctgacgtgaagcgcgaggcgagcgacatgcgcgacaaggcgcagcgctcgctcgac
cgggcacagcagagcaaagccgggatggagcatgccgtggccgagctgcgggacctcatc
gcccggatcaaggagttcctcaacgaggagggcgcggacccggagagcatcatgctggtg
gcgaacaacgtcctgaagctggggctgcccgtgacgcccggggaggccgaggcgctggct
cagcagattcgcgacagcgtggcacgcctctccgacgtcgacgccatcctggcgcagacg
gccaagaacatgacactcgcccagcgcctgctcgccgaagccaaaaaagccaaggcggat
gctgaggcggtgaagcagaagaccgaggaagtcgtgcaagcactgcaggaggccaacgac
gctcagagcgcggctcaggcggccatcaacaacgcccaacgcgacattgactcggcaaag
gaccgcatcgatgaggcagggaagaaggctggggacgcgggagcgatattgatggatgcc
atggatcgtctcaccaagatggccgccgacgtccaagcgctcaaggagaaggccgcagcc
aatcagctggcggccaaggatgccgcgacgcaggccgcccaggcgcgcgtcaacgccgac
gtcgccgcagatgagctgcaagaagtgaaggataaatttaaagaaatgcaagggctgatg
aattcgcggtccaatggcagcgacaaggccagggagcgcgccgagaagctgcacgaccag
gcatctcagctgctccaggacgtgcaggacaagatgaagcggcttaatgacttggagaag
ctgctggaatcgcaggctgacaaactggtggatgccaccggcaagctggatggcctagag
gaaagggcctccaaactgcagaaggaaatcagcaaaagggtgcagcactacttttcgtgc
cagaactga
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