Lethenteron reissneri (Far Eastern brook lamprey): 133353428
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Entry
133353428 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent T-type calcium channel subunit alpha-1H-like
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04010
MAPK signaling pathway
lrj04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133353428
04020 Calcium signaling pathway
133353428
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lrj04040
]
133353428
Ion channels [BR:
lrj04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
133353428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
133353428
NCBI-ProteinID:
XP_061425664
LinkDB
All DBs
Position
44:4389987..4697714
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AA seq
2726 aa
AA seq
DB search
MAERLPEAGAPRDHGSRLCSRGTCPTTATTTAPATTSSTATTSTAGKTSSSVNAAASSSS
GGGVVGSSSSSVIYMPRCVHHSDVTSDAGESLPAAGPLPGAGALPGAERRHDRAAGGGGG
VGGGGGVGGVGGGGGGGGTGDVGEEGTEDPELPYPALAPVAFFVMKQSTMPRSWCLRMVC
NPWFERASMLVILLNCATLGMFQPCAEVECHSQRCQVLQAFDDFIFAFFAAEMLVKMVAL
GVFGKKCYMGDAWNRLDFFIVASGMLEYSLAMESVSLSSIRTVRVLRPLRAINRVPSMRI
LVTLLLDTLPMLGNVLLLCFFVFFVFGIVGVQLWAGLLRNRCFQAENVTLELNNSRMSPY
FPADNDDESPFICSLPRDNGMQTCDTVPPSVLPGGPRCRWPPPLSLRSSSPPQSSSSSLS
SSSSSLSYDANSSGLSFATLGEAVAAGHGYPYSQGGNVSGECINWNRLYTVCRAGLRNPH
SGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIIGSFFMINLCL
VVIATQFSETKQRENQLMEEQRARMHGSDSSLASFREPGSCYEELVRYLGHLLRKVWRRS
SRAFVDAHVALQRRINPNAAAAAAAAAAAAAAAAGGRPRRDQNGSKQGTRPRRRRKGKKG
SRKRRKSWRSVHHHHLVHHHHHHHHHYHVNGGGGGGGGGHRPALARCMCRPRGGGGGGGG
GPNERDVLPADVRTAVVVVSSPPAPVPPLPPPPLSSPSGNFGARRTPGLASVHSVYHADC
HLLAGRPLPFRGSPLTSEATAATAAAAASAVVASAVSQRPPPPRPPHEMNYPTIVPSAVV
VAPDKGNKTWKTRGPRRGESRAHSSSPTDAFAKQHHIFAAYAGTSELLCRCPAFPSVPLG
VPQPDLLPAAAGEGCALCAAGQDEPSSCRRGGGGGGGGGCGGGDSVSEGSAASGRESPSS
ARDGFGPGEAVCSVCRCRRHCRDRQAGSGSGSGSCSDSGSGDGSDCDDDDGDDGDDGGDD
DSDGDERDDGDGEDGGRDGTGKRGWLRRWKERPCVAGMARFCHTVSERFSWIVNSKYFNR
GIMVAILINTVSMAIEYHEQPEELTNILEISNIVFTSMFALEMLLKIFACGLFGYIRNQY
NIFDGVIVIISVWEIVGQSGGGLSVLRTFRLLRVLKLVRFMPALRRQLLVLMRTMDNVAT
FCMLLMLFIFIFSILGMHLFGCKFSLKTDTGDTIPDRKNFDSLLWAIVTVFQILTQEDWN
VVLYHGMASSSPWAALYFIALMTFGNYVLFNLLVAILVEGFQAEGDANKSESDGEQCSPY
NLDDGHDKLKELRSIAVLTPNGLLEGKCMSMPPLITHTAPTPWGSPRSPSPDSRRGSSSS
LGPCPGVPSPPSGRSSPWGGRGSVCSSRRSSWTSVGLDGFLPRPGGHALLPVRHDDKASL
SSAVQRDSLAQWSLRSVSPRGSVCSAGTEDGLSPRGLLIARRAASCDLPELLQTPAMRCN
GSPLSPLSPLSRSPSLPRGARLAQRHHQHHQQQQHQQQQQQFVSHGSSPLPGRETPRLSR
KFSDDAEEIYDSHCFRLRRRLEPYKPKFCESRKEWSLYLFAPHNKVRMQCRKIIAHKVFD
HVVLLFIFLNCITIALERPDIGADSPERLFMTISNYIFTAVFVTEMSIKVIAMALVFGDG
AYLRSTWNTLDGFLVLVSLVDIIVSLASDSGARILGILRVLRLLRTLRPLRVISRAPGLK
LVVETLITSLKPIGNIVLICCAFFIIFGILGVQLFKGKFYYCEGLDTKNVTNKSDCLRAN
YKWLKHKYNFDNLGQALMSLFVLSSKDGWVNIMYTGLDAVGLDQQPVINYNPWMLLYFIS
FLLLVSFFVLNMFVGVVVENFHKCRQHQEAEEARLREEKRLKRAEKKRRKAQKKPYYSEY
SPVRLFIHSVCTSSYLDIFITVFIGLNVLTMAMEHYNQPKSLNEGLKYCNYVFTSVFVLE
ALLKLLAFGIRRYFKDRWNQLDLAIVLLSIMGIILEEIEISASLPINPTIIRIMRVLRIT
RVLKLVKMATGMQALLAVVVQALPQVGNLGLLFLLLFFIYAALGVELFGGLTCEDYPCEG
LSRHATFENFGMALLTLFRVSTGDNWNGIMKDTLRECSSLDRQCISYLPVISPIYFVTFV
LTAQFVLVNVVVAVLMKHLEDSAEDAHEEEEEENAARIAAGIIGASGLPSATARLLGIAV
PTPNPGGNPALVAVSSPSFSPAHFRCIASSPSSSAAAAAALAGSRGSNPRRSGLELRAAR
PPGRLSSELTFRRPSVENVDDGSRLETLGEQTLLLPAVRHVEVSRALSLPSDALASTPDS
QQQQQELQQQQEQQQGASENSRMPEVEPNRAAQKSDSMAGCGMAAADVTPSSSASGRNGG
PVTQEVEEATAADRSPRHVELPERRRSRGVSPADGSPLASSSPRASPDGARASPSPASAL
HRHPTPELILDTHADGKTTTAAAGRLPAGGGGGGFHERARVIRMQRRHSVDVYPRDGPTG
CSSRPPPPSRPSRSSNGGGGSGSKVCVGIGWWKTPSPPSPPSPPTPPTPPLITVVAPGDA
VETAARGAREARRRCISYESLARRTGTPPVSHLLHHHHHQQQNERCPDGHGRERGRALPP
SLLAVPGDGGATPLARGPRCAGRGSVGSLSELLLLKAAAAEEEDPLVRPRTASLGVKSGA
SGGAASGARRSLVADDGENGSGCDAV
NT seq
8181 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgattacccgaagctggcgcgcccagggaccatggcagccgcctgtgcagc
cgtggaacctgccccaccaccgccaccaccaccgcccctgccacaaccagctcgaccgcc
accaccagcaccgccggcaagacgagcagcagcgtgaacgccgccgccagcagcagcagc
ggcggtggcgtcgtgggtagcagcagcagcagcgtgatctacatgccgcgttgtgtccac
cactcggacgtgacctcggacgccggcgaaagtttgcccgccgctggcccgcttcccggg
gcaggagcgttgcccggggcggagagacggcacgaccgggcggccggtggtggcggtggt
gtcggtggtggcggtggtgtcggtggtgtcggtggtggtggcggtggtggcgggacggga
gatgttggggaagaaggaacggaagacccggagctaccttaccccgcgctcgcgcccgtc
gccttcttcgtcatgaagcagagcacgatgcccaggagctggtgtctcaggatggtttgt
aatccgtggtttgagcgggcgagcatgctcgtcattctgctcaactgtgccaccctgggc
atgttccagccctgcgccgaggtggagtgccactcgcagcgctgccaggtgctgcaggcc
tttgatgatttcatcttcgcgttctttgcggcggagatgctggtgaagatggtcgccctg
ggcgtgttcgggaagaagtgctacatgggcgacgcgtggaaccgcctcgacttcttcatc
gtggcctctggcatgctggagtactctctcgccatggagagcgtcagtctctcctccatc
cgcaccgtccgggtactccggccactgcgggcaatcaaccgggtccccagcatgcgaatc
ctggtgacgctgctgctggacacgctgcccatgctggggaacgtgcttcttctctgcttc
ttcgtgttcttcgtgttcgggatcgtgggagtgcagctgtgggctggacttctgcgcaat
cgatgcttccaggctgagaacgtgacactcgagctgaacaacagccgcatgtcaccgtac
ttcccggcggacaacgacgacgagagtcctttcatctgctcgctgccccgagacaacggc
atgcagacgtgcgacaccgtgccgccctcggtgctgcccggcgggccccgctgccgctgg
ccaccgccgttatcgctgcgatcgtcgtcgccgccgcagtcctcttcgtcctcgctgtcg
tcatcatcgtcgtcgttgtcgtacgatgccaacagctcggggctctcctttgccacgcta
ggggaggccgtggcggctggccacggctacccttacagccagggcggcaacgtgagcggc
gagtgcatcaactggaaccggctgtacacggtttgccgggcggggctacgcaacccgcac
agcggtgccatcaacttcgacaacatcggctacgcgtggatcgctatcttccaggtcatc
acgctggagggatgggtggatatcatgtattacgtgatggacgcccactccttctacaac
ttcatctacttcattctgctcatcatcatcggctccttcttcatgatcaacctgtgcctc
gtggtcatcgcgacgcagttctccgagacgaaacagcgcgagaaccagctgatggaggag
cagcgcgcgcgcatgcacggcagcgacagctccctcgccagcttccgcgagccgggcagc
tgctacgaggagctcgtgcgctacctggggcacttgctgcgcaaggtgtggcgccgctcc
tcgcgagccttcgtcgacgctcacgtggccctgcagcggcgcatcaaccccaacgccgcc
gccgccgcagcggccgcggcggcggcggcggccgcggccgccggcgggcgtccgcggcgc
gaccagaacggcagcaagcagggcacgcgcccgagacgccgccgcaaggggaagaagggc
agccgcaagaggcgcaagtcctggaggtcggtgcaccaccaccacctcgtgcaccatcac
caccaccatcaccaccactaccacgtcaacgggggaggcggcggtggcggtggcgggcac
cggccggcgctcgcgcggtgcatgtgccgtccccgtggcggcggtggcggcggcggcggc
ggtcccaacgagcgcgacgtgttgccggcggacgttcggacggccgtcgtggtggtgtcg
tcgccgccggcgccggtgccgccgctgccaccgccgccgctttcgtcgccgtccggtaac
tttggtgcgcgacgcacgccgggcttggcgtccgtgcacagcgtctaccacgccgactgc
cacctgctggcgggacgcccgctgcccttccggggttcgccgctcacctcggaggccacg
gcggcgacggcggcggcggcggcctccgccgtggtcgcgtcggccgtgtcccaacggccc
ccgccgcctcggccgccgcacgagatgaactacccgaccatcgtgccgtcggcggtggtg
gtggcgccggacaaagggaacaagacgtggaagacgcgagggccgcgccggggagagtcg
cgggcacacagctcgagccccacggacgccttcgccaagcagcaccacatcttcgccgct
tacgcgggcacgagcgagctgctgtgccgctgcccggcgttccccagcgtccccctgggc
gtcccgcaacccgacctcctgccggccgcggcaggcgaagggtgcgccctgtgcgccgcg
ggacaggacgagccgtcgtcgtgcaggcgaggaggaggaggaggaggcggaggaggctgc
ggcggcggcgactcggtctcggagggctccgccgcgtccgggcgcgagtccccctccagc
gcccgcgatggcttcgggcccggggaggccgtctgctccgtctgccgctgcaggcggcac
tgccgtgaccgccaagccggctccggctctggctccggctcctgctccgactcgggctcc
ggcgacggcagcgattgcgacgacgacgacggagacgacggagacgatggcggcgacgac
gacagcgacggagatgaacgcgacgacggcgacggggaggacgggggacgcgacgggacg
gggaagcgcgggtggctgcggcgctggaaggagcggccgtgtgtcgccgggatggcgcgc
ttctgccacaccgtgagcgagcgcttcagctggatcgtcaacagcaagtacttcaaccgc
ggcatcatggtggccatcctcatcaacaccgtcagcatggccatcgagtaccacgagcag
ccggaggagctcaccaacatcttagagatcagcaacatcgtgttcacgagcatgtttgcg
ctcgagatgcttctgaagatcttcgcgtgcggcctctttggctacatccgcaaccagtac
aacatcttcgacggcgtcatcgtcatcatcagcgtgtgggagatcgtggggcagtcgggc
ggagggctctcggtgttgcgcacgttccggctgctgcgcgtgctcaagctggtgcgcttc
atgcccgcgctgcgccgccagctcctggtgctcatgagaaccatggacaacgtggccacc
ttctgcatgctgctcatgctcttcatctttatcttcagcatcctggggatgcatctcttt
ggatgcaagttcagcctgaagaccgacacgggagacacaatccccgatcggaagaacttc
gactccctcctctgggcaatcgtcaccgtgttccagatcctgacacaggaggactggaac
gtggtcctgtaccacggcatggcctcctcgtctccctgggctgcgctctacttcatcgcg
ctcatgacctttggaaactacgtcctcttcaacctcctggtggccatcctggtggaggga
ttccaggcggagggcgatgcaaacaagtctgagtccgatggggagcagtgctccccctat
aacctggatgacggacacgacaagcttaaagaactccgctccattgccgtgctgacaccc
aatggactcctggaaggaaagtgcatgtcaatgccaccgctcatcacccacacggccccc
accccatgggggtctcctcgctccccgtctcccgactcacggagagggagcagctcctcc
ctggggccctgccccggggtcccctccccgcccagcgggcgcagctccccgtggggcggc
cgtggcagcgtgtgcagcagccgtcgctccagctggaccagcgtgggcctcgacgggttc
ctgccgcgtcccggcgggcacgcgctgctgcccgtgcgccacgacgacaaggcgtcgctc
tcgtcggccgtgcagagggacagcctcgcgcagtggagcctgaggagcgtcagcccgcgg
ggcagcgtgtgctcggcgggcacggaggacggcctctccccccggggcctcctcatcgcc
cgccgcgccgcctcctgcgacctccccgagctactccagacgcccgccatgcgctgcaac
ggctcgccgctctccccgctgtcgccgctctcccgctcgccctccctgccgaggggcgct
cgcttggctcagcgacaccaccaacaccaccagcagcagcagcatcagcagcagcagcag
cagttcgtgtcacacgggagcagcccgctgcccggcagggagacgccgagattgtcacgc
aagttcagcgacgacgccgaagagatttacgatagccactgcttcaggctccgacggcga
ctggaaccctacaagcccaagttttgcgaatcccgaaaagaatggtcgctctacctgttt
gctccgcacaacaaggtcagaatgcagtgtcgcaagatcatcgcacacaaggtgtttgac
cacgtggtgcttctcttcatcttcctcaactgcatcaccatcgcccttgaaaggccagac
attggagcggacagccctgaacggctgttcatgaccatttccaactacatcttcacggcc
gtttttgtgactgagatgagcatcaaggtgatcgcaatggcgctggtctttggggacggc
gcgtacctacgcagcacgtggaacacgctcgacgggttcctggtcctggtctcgctggtc
gacatcatcgtgtcgcttgcgtccgacagtggagcgcgcatcctgggcatcctgcgcgtg
ctgcgtctgctgcgcacgctgcgacccctccgggtcatcagccgcgcgccgggactgaag
ctggtggtggagacgctgatcacgtccctgaagcccatcggcaacattgtcctcatctgc
tgcgcgttcttcatcatcttcggcatcctgggcgttcagctgttcaaggggaagttctac
tactgcgagggcctggacaccaagaacgtcaccaacaagtccgactgcctgagggccaac
tacaagtggctgaaacacaagtacaacttcgacaacctcgggcaggccctgatgtcgctg
ttcgttttgtcctccaaggacggctgggtgaacatcatgtacaccggcctcgatgccgtg
gggctcgatcagcagcccgtcatcaactacaacccgtggatgctgctctacttcatctcg
ttcctgctgctcgtcagcttcttcgtgctcaacatgttcgtgggcgtcgtggtggagaac
ttccacaagtgccggcagcaccaggaggccgaggaggctcgactccgcgaggagaagagg
ctcaagagggccgagaagaagcgacgcaaggcacagaagaagccctactactccgagtac
tcgcccgtgcgcctcttcatccactcggtgtgcacgtccagctacctggacatcttcatc
accgtcttcatcggcctcaacgtgctcaccatggcgatggagcactacaaccagcccaag
tctctgaacgagggcctcaagtactgcaactacgtcttcacctccgtcttcgtgctggag
gccttgctcaagctgctggcgttcgggattagacgctacttcaaggacaggtggaatcag
ctcgatttggccattgtcctcctgtccatcatgggcattatcctggaggagattgagatc
agtgcctccctgcccatcaacccgaccattatccgcatcatgagggtcctgcgcataaca
cgcgtgctgaagctggtgaagatggcaacggggatgcaggcgctgctggcagtggtggtg
caggcactcccccaggtggggaacttgggacttctctttctcctcctcttcttcatctac
gcggctctgggggtggagctcttcggaggactcacttgcgaggactacccgtgcgagggc
ctcagccgtcacgccacgttcgagaacttcggcatggcgctgctgacgctgttccgcgtg
tccacgggcgacaactggaacggcatcatgaaggacacgctgcgcgagtgcagcagcctc
gaccggcagtgcatctcgtacctgcccgtcatctcgcccatctacttcgtgacgttcgtg
ctcacggcgcagtttgtgctcgtcaacgtcgtggtggccgtgctcatgaagcacctggag
gacagcgccgaggacgcgcacgaggaagaggaggaggagaacgcggcgcgcatcgccgcc
gggatcatcggcgcctccggcctgccgagtgccaccgcccgcctcctgggcatcgcggtg
cccacccccaaccccggcggcaacccggcgctcgtggccgtctcgtcgccgtcgttctcc
ccggcgcacttccgctgcatcgcgtcctcgccttcctcctccgcggcggcggcggcggcg
ttggccgggagcaggggatcgaaccctcgccgctccgggttggagctccgcgccgctcgg
ccccccggccggttgagcagcgagctcacgttccggaggcccagcgtggagaacgtggac
gacggctcccggctcgagacgctgggggagcagacactgctgctgcccgcagtgcggcac
gtcgaggtcagccgagccctctcgctgcccagcgatgccctcgcgagcacgcccgactcg
cagcagcagcagcaggagctgcagcagcagcaggagcagcagcagggagcctctgagaac
agcagaatgccggaggtggaaccaaatcgggcggctcagaaatcagattccatggcaggc
tgtggcatggcagcggcagacgtgacaccgtcaagctcagccagtggccgcaatggggga
cctgtgacacaggaggttgaggaggcgacggctgccgatcggtctccgaggcacgtggag
cttccggagcgtcgacgcagccgcggcgtctctcccgcagatggctcaccgctcgcctcg
agctcgccgcgagcgtcgcccgacggcgcccgcgcctccccctcgcccgcctccgccctc
caccggcatccgacacccgagctgattcttgacactcacgcggacgggaagacgacaacg
gcggcggccggtcgacttcccgccgggggtggcggcgggggcttccacgagcgtgcccgg
gtcatccgcatgcaacggcgccactcggtggacgtttacccacgcgacgggccgacgggc
tgctcgtcccgccctccgccgccatcgcggccctcgcggtcgtccaacggcggtggcggc
agtggctcgaaggtctgcgtcggaatcgggtggtggaaaacgccgtcgccaccgtcgcca
ccgtcgccaccgacgccaccgacgccaccactcataactgtggtggcgccgggggatgcc
gtggagaccgcggcgcgaggagcccgggaggcccggcgacgctgcatttcgtacgagtcg
ctggcgaggaggacggggacgccgcctgttagtcatctgctccatcatcatcatcatcag
cagcagaatgagcgttgtcccgacggccatgggcgcgagcgcggacgcgcactgccgccg
tcgctgctggctgtgcccggcgatggcggggcgacgccgctggcgcgagggccgcgctgc
gcgggacgcggctccgtcgggagcctctccgagttgctgctgctgaaagcggcggcggcg
gaggaggaggatccgctggtgagaccgaggacggcttcgctgggtgtcaagagcggcgcg
tccggtggggcagcctcgggggccaggagaagcttggtggcggacgatggggagaatggc
agcggctgcgacgcagtctag
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integrated database retrieval system
