Lethenteron reissneri (Far Eastern brook lamprey): 133355505
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Entry
133355505 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04510
Focal adhesion
lrj04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133355505
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133355505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
DUF3450
Motif
Other DBs
NCBI-GeneID:
133355505
NCBI-ProteinID:
XP_061428814
LinkDB
All DBs
Position
51:complement(8098097..8141171)
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AA seq
1818 aa
AA seq
DB search
MGVSTAILAASTLLALLGPVSGEPEMPHGCAQGSCYPATGDLLVGRSDRLGASSTCGLAQ
PQPYCIVSHLQDEKKCFTCDSREEVGGGGGYGALSHGVHNVITAFALDRKKAWWQSENGV
ENVTLRLDLEAEFHFTHLIMTFKTFRPASLLIERSADFGRTWQIYRYFAYDCSAAFPGVA
TGPLRRVDDVICESRYSDIEPSTEGEVIFRVLDPAIKITDPYSPAIQSLLKITNLRINFT
RLHTLGDNLLDSRVEIKEKYYYALYELVVRGNCFCYGHASECAPIDGVRGDVDGMVHGRC
VCKHNTEGLNCERCEDFYNDMPWRPAEGRNTNACKRCNCNNHAVRCHFDGAVFAATGNAS
GGVCEDCQHNTAGRSCELCKPFFYQDPLRDIRDAAVCVPCDCDPDGSLNGGMCDGHTDPS
AGLESGQCRCKAHVEGPRCDQCRAGFYGLDAEQPDGCQPCHCNPLGTVGGAAACDAVTGD
CYCKRLVTGRSCDQCLAEHWGLSHDGSGCRPCECDVGGAVDNRCSVESGQCHCRGHMGGR
PCSQPDSGFFCMALDHYTYEAETALPVDSNGTPGGLAESLLTPSLCEERERVKQGLPTGR
GLALVPRAPTPGRAPTWTGPGFVRVPEGGRLEFRVSDVPHSMDYELLIRYEPQLPEEWEV
VLVTVLRPSDIPTHSPCGNTIPADDHLAVALPPGSRYVVLPQAVCLEKGVSYVIRADFTR
YTTHEHTESAHVLIDSLVLLPLYTSLEMFSGDDRESTRRRENFDRYLCQESGKAVMKQPV
TEVCAGLICSLSALLHDGALPCQCDLQGSLSTECDPNGGQCHCRPNVVGRRCDACAPGTY
GFGPSGCLSCECSDEGSHHAFCDARTGQCRCRHGAYGRRCDHCQPGYWGFPACRPCRCNG
HAEECHPVTGTCHSCREHTAGESCERCADGYYGNPVLGSGEQCRPCPCPGGPGSGRHFAS
SCHEDPHSQRVVCSCRPGYTGSSCEECAPGHHGNPHEAGGSCRPCRCHGNIDPTDPGSCD
RRSGVCLRCLHHSHGPDCGACLPGFYGNATQQSCQRCACSPHGVDPRRCPPGGALCECDA
ATGQCPCRPHALGRACEHCAPGHWGLAEGEGCRACACDRTKALGDACNEFTGQCECQPGF
GGRSCTECMENFWGNPSVECIACQCDARGISTAQCERATGHCVCRAGVAGVRCDTCARGF
SGSFPHCEPCHQCFGDWDRIVQSLAERSRGLAERAARLAESGAVGAFGEQFGALEEKLAE
ARRIVDGRVATAHSVTALIGSMEDIRKMIDELTNRLTPLEIDLTESQDRNANATGRIAEL
ERDVRRLNRTAGGLEHQLDVIKNSNYRGAYDSVRQLHADSLAAESRANASVAGDGSPVGR
SADARSRARALLEASRDDFRRKNAAGRDALETLADDVRSLSLRTVSEKVCGSPGDEPCSD
SPCGGPGCRDEDGAPRCGGLGCNGAATAATEALERARNADLEIQQAAAQVEELNKQVQDA
RARSHQARGQAEAALDRANRTRERAQRANAQLRALIQQIKDFLQQDSASPDDIELVSNRV
LELSVPASAEQTHELAAEIKRRVADLANVDAILAQTSGDIADANSLLQEARDAKTRADDV
LATAEGVKGALEDAEMAQKAAQEAINQAKGDIQGAQNTLASIASETDSAEQRLREAAERA
ARLDDAVAALKIKSSQAAMAGTRADKAAGNAKLRADEAKQILGGELREKFGLLETQARSK
ADGATTARQRAEALRDQARKLLTGAQDKLQRLMDLEEQYERNEQALEDKARSLDGLEEKM
QAILHAINRQITVYNTCQ
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atgggggtctctaccgccatcctggcggcgtccacgctcctggccctgctgggccccgtc
tcgggcgagccggagatgccccacggctgcgctcagggcagctgctacccagccacgggc
gacctgctggtggggcgcagcgaccgcctcggggcctcctccacgtgcggccttgcgcag
ccgcagccgtactgcatcgtgagccacctgcaggatgagaagaagtgcttcacgtgcgac
tcgcgcgaggaggtgggcggcggcggcggctacggcgccctgagccacggcgtgcacaac
gtcatcaccgccttcgccctcgaccgcaagaaggcctggtggcagagcgagaacggcgtg
gagaacgtgaccctgcgtctcgacctggaggctgagttccacttcacccacctcatcatg
acctttaagacgttccgcccggcgtcgctgctcatcgagcgctccgccgactttggccgc
acgtggcagatctaccgctacttcgcctacgactgctccgccgccttccccggcgtggcc
acggggccgctgcgccgcgtggacgacgtcatctgcgagtcgcgatactcggacatcgag
ccgtccaccgagggggaggtcatcttccgagtgctggacccagccatcaagatcaccgac
ccctacagcccggccatccagagcctgctgaagatcacgaacctgcgcatcaacttcacg
cggctgcacacgctgggggacaacctgctggactcgcgcgtcgagatcaaggagaagtac
tactacgcgctgtacgagctcgtcgtgcgcggcaactgcttctgctacggccacgcgagc
gagtgcgcgcccatcgacggcgtgcgcggggacgtcgacggcatggtgcacgggcgctgc
gtgtgcaagcacaacaccgaggggctcaactgcgagcgctgcgaggatttctacaacgac
atgccgtggcgcccggccgaggggcgcaacaccaacgcctgcaagcgctgcaactgcaac
aaccacgcggtgcggtgccactttgacggcgcggtgtttgccgcgacggggaacgccagc
ggcggcgtgtgcgaggactgccagcacaacacggccgggcgcagctgcgagctctgcaaa
cccttcttctaccaggacccgctgcgcgacatccgcgacgccgccgtctgcgttccgtgc
gactgcgaccccgacggctcgctgaacggggggatgtgtgacggacacaccgacccgtcg
gcggggctcgagtccgggcagtgccgctgcaaggcgcacgtggaggggccgcggtgcgac
cagtgccgggccggattctacggactcgacgccgagcagcccgacggatgccagccttgc
cactgtaacccgctgggcacggtgggtggcgccgcggcatgcgacgccgtcaccggcgac
tgctactgcaagcgtctcgtcacggggcgcagctgcgaccagtgcctggcggagcactgg
ggactgagccacgacgggagcgggtgccgcccgtgcgagtgcgacgtgggaggcgccgtc
gacaaccggtgctccgtggagtcggggcagtgccactgccgcggccacatgggcgggcgg
ccgtgctcgcagccggactcgggcttcttctgcatggcgctcgaccactacacgtacgag
gccgagaccgcgctgcccgtcgactccaacggcacccccggggggctggcggagtccctg
ctgaccccctcgttgtgtgaggagcgagagcgcgtcaagcaaggcctccccacaggccgg
ggcctggcgctggtgccgcgagcccccacgccggggcgcgcgcccacgtggacggggccg
ggcttcgtgcgggtgcccgagggcggccgcctcgagttccgcgtctccgacgtcccccac
tccatggactacgagctgctcatccgctacgagccgcagctgccggaggagtgggaggtg
gtgctggtgacggtgctgcgccccagcgacatccccacgcactcgccgtgcgggaacacc
atcccggccgacgaccacctcgccgtggcgctgccgcccgggtcgcgctatgtggtgctg
ccccaggccgtgtgcctggagaagggagtgagctacgtgatccgcgccgacttcacgcgc
tacacgacgcacgagcacacggagagcgcccacgttctcatcgactcgctggtgctgctg
ccgctctacacatcgctggagatgttctccggggacgatcgcgagtcgactcggcggcgc
gagaactttgaccgctacctgtgccaggagagcggcaaggccgtgatgaagcagccggtg
acggaggtctgcgccggcctcatctgcagcctgtcggcgctgctgcacgacggcgccctg
ccgtgccagtgcgacctgcagggctcgctgagcacggagtgcgaccccaacgggggtcag
tgccattgccgccccaacgtggtggggcggcgctgtgacgcgtgcgcgcctgggacctac
ggcttcgggcccagcggctgcctctcgtgcgagtgcagcgacgagggctcccaccacgca
ttctgcgacgcgcgcaccgggcagtgccgctgccggcacggcgcgtacggccggcgctgc
gaccactgccagccgggctactggggcttcccggcgtgccggccctgccggtgcaacggc
cacgccgaggagtgccacccggtcaccgggacgtgccactcgtgccgcgagcacaccgcc
ggggagagctgcgagcgctgtgcggacggttactatggaaacccagtgctgggctcgggc
gagcagtgccggccttgcccgtgtcctggcggccccggctccgggcgtcacttcgccagc
tcgtgccacgaagacccgcactcgcagcgcgtcgtctgcagctgccgtccaggatacacc
ggatcgagctgcgaggagtgcgcccccggtcaccacggcaacccgcacgaggcgggcggc
tcgtgccggccctgccgctgccacggcaacatcgacccgaccgacccggggtcttgcgac
cggcgctcgggcgtctgcctgcgctgcctgcaccactcacacgggcccgactgcggcgcc
tgcctgcccggtttctacggcaacgccacgcagcagagctgccaacgctgcgcgtgcagc
ccgcacggcgtggacccgcgccgctgcccgccgggcggcgcgctgtgcgagtgcgacgcg
gcgacggggcagtgcccgtgccggccgcacgcgctgggacgcgcgtgcgagcactgcgcg
cccggccactggggcctggccgagggcgaggggtgccgtgcgtgcgcctgcgaccgcacc
aaggcgctcggcgacgcctgcaacgagttcacagggcagtgcgagtgccagcccggcttc
gggggccgctcctgcaccgaatgcatggagaacttctggggcaatcccagcgtcgagtgc
atcgcgtgccagtgcgatgcgcgtgggatctccacggcgcagtgcgagcgagcaacggga
cactgcgtgtgccgcgccggcgtggcgggggtgcgctgcgacacgtgcgcgcgcgggttc
tccgggagcttcccgcactgcgagccttgccaccagtgcttcggggactgggaccgcatc
gtgcagtcgctggcggagcggtcgcgcggcctggcggagcgcgccgctcgcctcgccgag
tcgggagccgtcggcgccttcggggagcagtttggagccctggaggagaagctggcggag
gcgcggaggatcgtggacgggcgcgtcgccacggcccactccgtcaccgccctcatcggc
tccatggaggacatccggaaaatgatcgatgagctgacgaaccggctgacgccgctggag
atcgacctcacggaaagccaggaccggaacgccaacgccacggggcggatcgcggagctg
gagcgcgacgtgcggcgcctgaaccgcaccgccggcggcctggagcaccagctggatgtc
atcaagaactccaattaccgcggcgcgtacgacagcgtgcgccagctgcacgccgactcg
ctggcggcggagtcgcgagccaacgcctccgtggcgggcgacgggagcccggtgggccgc
tcggccgacgcccgctcgcgagcccgggcgctgctcgaggcctcgcgcgacgacttccgg
cgcaagaacgcggccgggcgcgacgcgctggagacgctcgcggacgacgtgcgctcgctc
agcctgcgcaccgtcagcgagaaggtgtgcggctccccgggtgacgagccgtgctcggac
tccccgtgcgggggccccggctgccgggacgaggacggtgccccgcgctgcgggggcctg
ggctgcaacggcgctgccaccgccgccacggaggcgctggagcgagcgcgcaacgccgac
ctggagatccagcaggccgcggcgcaggtggaggagctcaacaagcaggtccaggatgcg
cgtgcgaggtcgcaccaggcccgggggcaggcggaggcggcgctggacagagccaacagg
acgcgggagcgcgcacagcgcgccaacgctcagctccgcgccctcatccagcagatcaag
gacttcctgcagcaggacagcgccagccccgacgacatcgagctggtgtcgaaccgcgtg
ctggagctgagcgtgccggcgtcggccgagcagacgcacgagctggcggccgagatcaag
cggcgcgtcgccgacctcgccaacgtggacgccatcctggcgcagacgagcggcgacatc
gccgacgccaacagcctcctgcaggaggcgcgcgacgccaagacgcgtgccgatgacgtg
ttggcgacggcggagggagtgaagggggcactggaggatgcggagatggcgcagaaagcg
gcgcaagaggcgatcaatcaggcgaagggagacatccaaggggcgcagaacacactggca
tcgatcgcgtcggagacggactccgcggagcagcgtctgcgcgaggcggcagagcgcgcg
gcgcgcctcgacgacgccgtcgcggcgctcaagatcaagagcagccaggccgccatggcc
ggcacgcgcgccgacaaggccgcggggaacgccaagctccgcgccgacgaagccaagcag
atcctaggcggggagctgagggagaagttcggcttgctggagacgcaggctcgaagcaag
gcggacggcgccaccacggcgcgccagcgagccgaggccctgcgcgatcaggcccgcaaa
ctcctcaccggtgcacaggacaagctgcagaggctcatggacctggaagagcagtacgag
aggaacgagcaggcgctggaggacaaggctcgctcgctggacggactcgaggagaagatg
caagccatcctgcacgccatcaaccgccagatcaccgtctacaacacgtgccagtga
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