Ligilactobacillus ruminis: LRC_13220
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Entry
LRC_13220 CDS
T01626
Name
(GenBank) thiamine biosynthesis protein
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
lrm
Ligilactobacillus ruminis
Pathway
lrm00730
Thiamine metabolism
lrm01100
Metabolic pathways
lrm01240
Biosynthesis of cofactors
lrm04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
lrm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LRC_13220
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
LRC_13220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrm03016
]
LRC_13220
Enzymes [BR:
lrm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
LRC_13220
Transfer RNA biogenesis [BR:
lrm03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
LRC_13220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
NAD_synthase
ATP_bind_3
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AEN78575
UniProt:
G2SQ49
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All DBs
Position
complement(1380297..1381514)
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AA seq
405 aa
AA seq
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MQYTEIMVRYGELSTKGKNRRNFIDRLGFNVRSAMHDFPKLVVKAHRDRMHIYLNGEDSD
KVIERLKQVFGIQNFSPSVRVERDVEAVKEKAVEMINEKFFDGMTFKVNTRRSDHHFVYD
TNELNEMIGGYVLQNVPGLKVKMKNPDITLRVEVRCDGIYLSHEKIQGAGGLPVGTAGRA
MLMLSGGIDSPVAGYLAMKRGVDIEMVHFFSPPYTSEQALNKAKELTAKLTPYVGRIQFI
EVPFTEIQETVKHDVPSGYLMTIQRRFMLRLTEALAKKRGGLAIFNGEALGQVASQTLES
MAAINDVTTMPVLRPVVSMDKNEIIKIAQKIDTFDLSIMPFEDCCTVFAPPAPKTKPKID
RARYYESRLDVDGLIQRALDGVKVTNIQIGDSFLNDSEQAFSELL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatactgaaattatggttcgttacggcgaactgtcaacaaaaggcaaaaacagg
cgaaactttatcgaccgtttgggattcaacgtgcgttccgcaatgcacgattttccgaaa
ttggtcgtcaaggcacatcgtgatcgaatgcacatttatttgaacggtgaggattccgac
aaagtcatcgaacgtttaaaacaggtttttggaattcagaatttttcaccatcggtcagg
gtcgaacgcgatgtcgaagctgtaaaggaaaaagccgttgaaatgatcaacgaaaagttc
ttcgacggaatgacgttcaaagtaaatacgagacgctccgatcaccattttgtctatgat
acgaacgaattgaatgaaatgatcggcggatacgtgcttcaaaacgtcccaggactcaag
gttaaaatgaaaaatccggatattacgctgcgagtcgaagttcgttgcgacggcatctat
ttgtctcatgaaaagatccagggggccggcggactgcctgtcggcaccgccggacgcgca
atgctgatgctttcaggcggcattgattcgccggttgcgggctatcttgcaatgaaacgc
ggcgttgatattgaaatggttcacttcttcagtccgccatatacgagcgaacaggctttg
aacaaagccaaggaactgacagccaagctgacgccttacgttggaagaatacagtttatc
gaggttccgtttaccgaaattcaggaaacggtcaaacatgacgttccgtccggatatctg
atgacgattcagcgacggttcatgctcaggctgacggaggcattagccaaaaaacgcggt
ggtctggcaatttttaacggtgaagctttgggacaggttgcttcccagacgcttgaaagt
atggcggccatcaacgatgtgacgacgatgcctgttttgcggccggttgtttcaatggat
aaaaatgaaatcatcaagattgctcaaaagattgatacgtttgatctgtcaatcatgccg
tttgaggattgctgtaccgttttcgctcctcctgctccgaagacgaagccgaaaattgat
cgcgcgcgctattacgaaagccgcttagatgtcgatggattgattcagcgtgctttggac
ggcgttaaagtgacgaatattcaaattggcgattctttcttaaatgattccgaacaggca
ttttcagaattgctttaa
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