Lactococcus raffinolactis: CMV25_02770
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Entry
CMV25_02770 CDS
T05231
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lrn
Lactococcus raffinolactis
Pathway
lrn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lrn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CMV25_02770 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrn03021
]
CMV25_02770 (rpoE)
03400 DNA repair and recombination proteins [BR:
lrn03400
]
CMV25_02770 (rpoE)
Transcription machinery [BR:
lrn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CMV25_02770 (rpoE)
DNA repair and recombination proteins [BR:
lrn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CMV25_02770 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
LPG_synthase_C
Motif
Other DBs
NCBI-ProteinID:
ATC60872
LinkDB
All DBs
Position
complement(577790..578374)
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AA seq
194 aa
AA seq
DB search
MKIKAFENQDLSELSMIEVAHAMLEEQGKEMDFNVLVNEIQDYLGKSDSEIRDRLSRFYT
ELNTDGSFIPLGNNVWALRSWYAIDEIDEEVVALDELDDEGDRPKKKRKKVNAFAADGID
IDYSDDDPEDDDDINDTDVTYDDENPDDEKDEVEAFDVELEEVDIDDAEVDGIDEDDDED
DDEDEEDDDLVTKK
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaattaaagcatttgaaaatcaagatttgtcagaactttcgatgattgaagtcgca
cacgcgatgttggaagaacaaggcaaggaaatggactttaacgtccttgtcaatgaaatc
caagactatcttggcaaatcagacagtgaaattcgtgatcgtctgtcgcgcttttatact
gaattaaatacagatggtagctttattccacttggtaacaacgtatgggctttacgttcg
tggtatgccattgacgagattgacgaagaagttgttgctcttgacgagttggatgatgaa
ggcgaccgtcctaagaaaaaacgaaaaaaagtcaacgcttttgcagcagatggcattgat
atcgactacagtgatgatgatccagaagatgacgatgatatcaatgatacggatgtcaca
tatgacgatgaaaacccagatgacgaaaaagatgaggtcgaagcctttgatgtcgagctt
gaagaagttgatattgatgatgccgaagtagatggtatcgatgaagatgacgacgaagac
gacgatgaagacgaagaagatgacgatttagtcactaaaaaataa
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