Lactococcus raffinolactis: CMV25_06350
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Entry
CMV25_06350 CDS
T05231
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
lrn
Lactococcus raffinolactis
Pathway
lrn00730
Thiamine metabolism
lrn01100
Metabolic pathways
lrn01240
Biosynthesis of cofactors
lrn04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
lrn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CMV25_06350
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
CMV25_06350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrn03016
]
CMV25_06350
Enzymes [BR:
lrn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
CMV25_06350
Transfer RNA biogenesis [BR:
lrn03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CMV25_06350
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
UPF0227
NAD_synthase
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
ATC61508
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Position
1264483..1265706
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AA seq
407 aa
AA seq
DB search
MTNLNYSEIMVRYGELSTKGKNRMRFIDRLAKNIREVLTEFPTISVKAERDRAHIFLNGA
EYGPLAEKLVKVFGIQNFSPAIKVDKNMPAIEVAVATLMKNVYQEGMTFKITAKRSDHDF
ELDSTELNRELGHTVIVAVPHAKVQMKKPDIDLRVEIRPDFAYLSYETIKGAGGLPVGTA
GKGMLMLSGGIDSPVAGYLALKRGVEIEAVHFASPPYTSPGALQKAKDLASKLTVFGGDI
QFIEVPFTEIQEEIKEKVPMPYLMTVTRRFMMRVVDEIRARRHGQVIINGESLGQVASQT
LGSMTAINAVTTTPVIRPVVTMDKLEIIELAEKIDTFNISIQPFEDCCTIFAPPQPKTKP
KLENAEKFEARLDINNLVKRAVDGIMVSQITGEMQVDALEAAIQDLL
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatttaaattattcagaaattatggttcgctatggcgagctatcaaccaagggc
aaaaaccggatgcgctttatcgaccgtttggctaaaaatatccgagaagttttgacagaa
tttccgacgatttcagttaaggctgagcgagatcgggcacatattttcttaaacggagca
gaatatgggcccttggctgagaagttggtcaaggtttttgggattcaaaacttttcacct
gccattaaagtagacaaaaatatgccagcgattgaggtagcagtcgcaaccttgatgaaa
aatgtttatcaagaaggtatgacttttaaaatcacagctaagcgctctgaccatgacttc
gagttagatagtacagagttaaatcgtgagttggggcacactgtgattgtggcggtacca
cacgccaaagtacagatgaaaaagcctgatattgatctacgtgttgaaatccggcctgac
tttgcttacctgagctatgaaacgattaaaggtgccggaggcttgcctgttgggacggct
ggtaaaggcatgctgatgctgtctggtgggattgattcacccgttgcgggttatcttgcg
ctgaaacgtggcgttgaaatcgaagcggttcattttgccagcccaccttatactagtcct
ggtgcgcttcaaaaagccaaggaccttgccagtaaattaactgtttttggtggcgatatt
caatttatcgaagtgccatttactgaaattcaagaagaaatcaaagaaaaagtacccatg
ccgtatttgatgacggtgacacgtcgtttcatgatgcgtgttgtcgatgaaattcgcgcg
cgtcgtcatgggcaggttatcatcaacggtgagagcctagggcaagtagctagtcaaaca
ctgggctcaatgacagctatcaatgcagttacaacgacacccgtcattcgaccagttgta
accatggataaacttgaaattatcgaattggctgagaagattgataccttcaatatttct
attcaaccctttgaagattgttgtacgatttttgcaccgccacaacctaaaacgaaacca
aaacttgaaaatgctgaaaaatttgaagcacggttggatattaacaacctagtaaaacga
gcagttgatgggatcatggttagtcaaattactggggaaatgcaagtggatgcactcgaa
gcagccattcaagatttgttatag
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