Lacticaseibacillus rhamnosus LOCK900: LOCK900_1700
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Entry
LOCK900_1700 CDS
T02730
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lro
Lacticaseibacillus rhamnosus LOCK900
Pathway
lro03030
DNA replication
lro03410
Base excision repair
lro03420
Nucleotide excision repair
lro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LOCK900_1700
03410 Base excision repair
LOCK900_1700
03420 Nucleotide excision repair
LOCK900_1700
03440 Homologous recombination
LOCK900_1700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lro03032
]
LOCK900_1700
03400 DNA repair and recombination proteins [BR:
lro03400
]
LOCK900_1700
Enzymes [BR:
lro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LOCK900_1700
DNA replication proteins [BR:
lro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LOCK900_1700
DNA repair and recombination proteins [BR:
lro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LOCK900_1700
NER (nucleotide excision repair)
GGR (global genome repair) factors
LOCK900_1700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AGP71505
LinkDB
All DBs
Position
complement(1660744..1663389)
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AA seq
881 aa
AA seq
DB search
MTSQTKLLLIDGNSIAFRAFFALYNQLDRFTNQDGLHTNAIYAFNNMLEIVLKSVKPDAA
LVAFDAGKTTFRTAKYADYKSGRAKTPSELLEQLPYIKELLDDMGIQHYELKDYEADDII
GTMAKRADDAGWQTTIVTGDRDLTQLTTDQTTVQVTVKGVNELEAYTPEHVKEKLGITPT
QIIDLKGLMGDTSDNYPGVTKVGEKTALKLLKQYGSIENLYANIDAMKTSKMKENLINDK
DKAYLSKQLATIDRDAPVTIDLADVKYNGPDLAKLRDFYTKMNMNSLLKKIGGDVAKPSQ
PVHYSVLDDQSILALTKTTEPLTFEIEMLADNYHTAEQVGFFIGTKEETYVSTDVSLLTI
SEVAKWLGDSNRDLTVFDGKRNIVAAHRLGLHLPDIAFDVLLASYLINPDENSNDLGKIA
EDHDYHDLPRDEDVYGKGAKRQVPEDKLLFEQFARKSQALFALRPDLTEDLAKQEQTDLF
TDMEMPLARVLAEMEIQGITLNAQTLKDMGTEFSQSIKVLEEKIYGEAGVKFNLNSPKQL
GEVLFEKLNLPVIKKTKTGYSTSVDVLNELKSASPIVQDILDYRGWAKLNSTYVVGLLKA
QMPDHKIHTRYLQTLTQTGRLSSVDPNMQNIPARDEGKIIRKAFVPSHPDWQIFSSDYSQ
IELRVLSHISGDENMQQAFKHGVDIHANTAMKIFGLDSPDEVTPDMRRQAKATNFGIVYG
ISDYGLAQNIGISRKQAKAFIDGYFEQYPKVHDYMENMVKKAREDGYVETLFHRRRYLPQ
IHSRNFNLRKFAERTAMNTPIQGSAADIIKVAMIRMQKALDEAHLQAKMLLQVHDELIFE
APTAEMAQLGQLVPKIMDSAVSLAVPLKVESHYGPTWFDAK
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtcaaactaaattattgttgattgacggcaactcgattgcatttcgtgctttt
tttgccttgtacaatcaactcgatcgtttcaccaatcaagatgggctgcacaccaatgcc
atctacgcatttaacaatatgctcgagattgttttaaagtcggttaaaccagatgctgcc
ttggttgcgtttgatgctggcaagacgacttttcgaacagctaaatacgcggattataaa
agcggtcgggcgaagacgccaagcgagttgttagagcagctgccgtatatcaaggaatta
ctcgacgatatgggcattcagcattatgaactcaaggattatgaggccgacgacattatc
ggaacgatggctaagcgtgctgatgatgcagggtggcagacaacgattgtgactggcgat
cgtgatttaacccaattaacgacggatcaaacgacggtgcaggtcacggtcaaaggcgtt
aatgaactagaggcgtacacgccggaacacgttaaagaaaagcttggcattacccccact
cagattattgatctaaaagggttaatgggtgatacgtcagataattatccaggggtcacc
aaggttggcgaaaaaacggccttaaaactgctaaagcaatacggcagtatcgaaaacctt
tacgctaacattgatgcgatgaagacttccaaaatgaaggaaaatctcatcaatgacaaa
gacaaagcgtatctgagcaagcagttagccacaattgaccgcgatgcacctgtgaccatc
gatcttgcagacgtaaagtataacggtcccgatttggcgaagttacgcgatttctatact
aagatgaatatgaattccctgttgaagaaaattggcggggatgttgcaaaaccgtcacag
cccgtacactattccgttttggatgaccaatcaattttggcgctcacgaaaacaaccgaa
ccgttaacctttgagattgaaatgttagcggataattatcataccgctgaacaagtgggc
tttttcattgggactaaagaagaaacttacgtcagcacggatgtgtcattgttgacaatt
tcggaagttgctaagtggcttggtgattcaaaccgcgacttaacggtgtttgatggtaaa
cgcaatattgtcgccgctcatcgtcttggcttgcatctgcctgacattgccttcgatgtt
ttgctggcctcgtatctgattaatccagatgaaaatagcaatgatctgggtaaaattgca
gaagaccatgattatcatgacttgcctcgcgatgaagatgtttatggtaaaggtgctaag
cgtcaagtgcctgaagataaactgctgtttgaacaattcgctcgtaagtctcaggcctta
ttcgccttgcgtcctgatttaaccgaagatttggctaagcaggaacagacggatcttttc
acggacatggaaatgccactggcgcgggttttggcggaaatggaaattcaaggtatcacg
ttaaatgcccaaaccttaaaggatatgggaaccgaattttcgcaaagcatcaaggtgttg
gaagaaaaaatttatggtgaagccggcgttaaatttaatctgaattcgccgaagcaatta
ggcgaagtgttattcgaaaagctaaatttaccagtgattaaaaagaccaaaaccggttat
tccaccagtgtcgatgttttaaacgaattgaaatcggctagtccaattgttcaggatatt
ctggattatcgcggctgggccaaactaaactcgacttatgtggtgggcttgttgaaagca
caaatgccggatcataaaattcacacccgttatttacagacactgacgcaaaccgggcgt
ctgagttccgttgacccgaatatgcaaaatattccagcacgggatgaagggaagattatc
cggaaagcctttgtcccttctcatccggattggcagatttttagctcggattattcgcaa
atcgaattacgcgtgttatcgcatatctcgggtgatgagaatatgcaacaagcctttaaa
cacggcgttgatattcacgcgaataccgccatgaaaatttttggcctcgattcacctgat
gaggtcacgccggatatgcgccggcaagccaaggccacgaactttgggattgtatacggc
atcagtgactatggcctagcacaaaatatcggaatttcgcggaaacaagctaaggcgttt
atcgacggttactttgaacagtacccgaaagtccacgattacatggaaaatatggtcaag
aaagcgcgtgaagacggctatgttgaaacgctcttccaccgccgccgttatctgcctcag
attcactcccgcaatttcaacttgcgtaagtttgcggaacgaacggcgatgaatacgccg
atccaaggaagtgccgcagatatcattaaagtcgcaatgattcgcatgcaaaaagcgttg
gatgaggcccatctgcaggcaaaaatgttgctgcaggtacacgatgaactgatttttgaa
gctccgactgctgaaatggcgcaacttggccaattagtgcctaagattatggactcggct
gtttcactggcggtacctttgaaagtcgaaagtcattatggaccgacctggtttgatgcg
aaataa
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