Labeo rohita (rohu): 127155957
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Entry
127155957 CDS
T09007
Name
(RefSeq) glycogen debranching enzyme-like isoform X1
KO
K01196
glycogen debranching enzyme [EC:
2.4.1.25
3.2.1.33
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00500
Starch and sucrose metabolism
lroh01100
Metabolic pathways
Module
lroh_M00855
Glycogen degradation, glycogen => glucose-6P
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
127155957
Enzymes [BR:
lroh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.25 4-alpha-glucanotransferase
127155957
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.33 amylo-alpha-1,6-glucosidase
127155957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
hDGE_amylase
GDE_C
hGDE_central
hGDE_N
Alpha-amylase
Motif
Other DBs
NCBI-GeneID:
127155957
NCBI-ProteinID:
XP_050954539
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All DBs
Position
24:8136454..8171016
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AA seq
1536 aa
AA seq
DB search
MFRGKQTRVLLLNDMERLERTLFRLEQGFELQFRPGPTLQGKSVHVHTNYPAPGKKFVSS
SFRQLEWVNPTGREDDSDKYCKLDLEIAGSYQYYFGCGNEERTGGGYIVVDPVLRIGHER
KILPLDCITVQTYLAKCLGALDEWLDRLRVAKETGYNMIHFTPLQKLGASRSCYSIADQL
ELNPDFCPAGKNYTWMDVGNLTEKLKKEWNMLCITDVVYNHTAANSKWIRLHPECGYNLV
NSPHLKPAWLLDRALWHFSCAVADGKYSESGLPPLIENDKRITILKGLLWTEVFSLLKLW
EFLQVNVEKAVEQFRKVLQAGNRPAGPELEGKPKLKVIQDSQYRRLSNTVDMQLALEMFG
RHTNGPKSIQECCDWFKKSLEELNVECYKEMHGHHEKAINCIVGTVCYERLATQGPQLGP
VTWKNPLVTRYFTFPFEDMTMEQENQLMQNPNDACHLLAHNGWVMGDDPLRNFAEPGSNV
YLRRELVCWGDSVKLRYGDKPEDCPYLWAHMKKYTEITAKHFSGVRLDNCHSTPLHVAEY
MLAVARQHRPDLYVVAELFTGSEELDNIFMTKLGITSLIREAMSAGDSHEEGRLVYRFGG
EPVGSFVQPSLRPLVPTIAHAMFLDVTHDNECPIQARSVYDALPSTAIVSMACCASGSTR
GYDELVPHQISVVKEERLYPKWNPDALPSSVGEVNLQSGIMAGKLALNKLHQELAEKGFT
QVYVDQLDEDTVAVTRHCPSTHQSVVTVSRTAFKNPETHQYREHLAPMYIPGKIEEVVLE
ARTVERNTESYVKDERFINGMPNYTVEIREHIQLKDSEIVKQGDATTKGRSEFVEEILFE
KLTPGSVIAFRVSLDPNSQKMVGYLRTQLSQFNRLYKSGSLTDSNVPGILKIALDFLMSK
LTLAEMNVLLFRCDAEEQEDGGGCYNIPSWMPLKYGGLQGFVSVLSEIRPKNDLGHPFCD
NLRQGDWMIDYVSSRLINKGGALREVGKWFSAVFTYLKHIPRYLVPCYFDAIIVGAYATA
VDAVFNQMSSFVQNGSTLVKQLALGSVQMCGVGRVPALPLLSPELEDVPIWLNSMTKQEE
QCCVSLAAGLPHFSTGIFRCWGRDTFIALRGLMLLTGRYLEARNIILAFAGTMRHGLIPN
LLGQGVAARYNCRDAVWWWLQCIQDYCNIVPNGTDILMCPVSRMYPTDDSEAQALGTVIH
DQPLYVVIQEAMQRHMQGIEFRERNAGPQIDHNMRDEGFNVEAKVNPETGFVYGGNRFNC
GTWMDKMGESDNAHNRGFPATPRDGSAVEIVGLCKSAVRWLMTMNDNGKFPYSSVTIHRD
GTEQSVSYKDWNQRIQENFERFFYVSDDPADPNEQHPDLVHKKCIYKDSYGASSPWCDYQ
LRPNFTIAMVVAPELFTVQRAWKALEIVEKKLLGPLGMKTLDPDDLVYCGVYDNALNNDD
YNCAKGFNYHQGPEWLWPVGYFLRAKLYFAKKMGQEKYNESVYLVKNVLSRLYTHLERSP
WKGLPELTNENGQYCPFSCETQAWSVATVLEALYDL
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atgttccgtggcaaacagacgagagtgcttcttctgaatgacatggagagactggagcgc
actctatttcgcctggagcaaggctttgagcttcagtttcggccgggcccgaccctccag
ggtaagagtgtgcatgtccacaccaactacccagcaccaggcaagaagttcgtcagctcc
agcttccgtcagctggagtgggtgaacccaactggcagagaggatgattcagacaaatat
tgtaaactggacctggagatagcaggctcttatcagtattactttgggtgtgggaatgag
gaaagaacaggaggtggctacattgttgtggatccagtgttgcgtattggccatgagagg
aagatcctgccccttgattgcattacagttcagacttatctcgctaagtgtttgggcgct
ctggatgaatggctagacagactcagagtggccaaggaaactggttacaatatgatccac
tttacgcctctgcagaaactaggcgcttcacgatcatgctattccatagctgatcagctg
gagctgaaccctgatttctgtccagctggcaagaattacacctggatggacgtgggcaac
ctgacggagaaacttaagaaagagtggaacatgctttgcatcacagatgtggtgtacaac
cacacagctgccaacagtaagtggatcagactccatccagagtgtggctataacctggta
aactctcctcatctgaagccagcctggctactggacagagccctgtggcatttcagctgc
gccgtagcagatggaaaatacagcgaaagcgggcttccacctcttattgagaatgacaaa
cgcattactattcttaaagggcttctgtggactgaagttttctccctactgaagttatgg
gagtttctacaggtgaatgttgagaaagccgtggagcagtttaggaaggttcttcaggct
ggtaacagacctgctgggcctgagctggaaggaaagccaaaattgaaagtcatccaggat
tcacagtacagacgcctcagcaacaccgtggacatgcaactggcactggagatgtttggc
agacacactaacggccccaaatccatccaggagtgctgcgattggtttaagaagagtcta
gaggaattaaatgttgaatgctataaggaaatgcatggtcatcatgagaaggctataaac
tgcatagtgggaacggtttgttatgaaaggctcgccacccaaggccctcagcttgggcct
gtcacctggaaaaacccgttggtgactagatattttaccttcccatttgaggacatgacc
atggagcaggaaaaccagctgatgcagaatccaaatgatgcttgtcatctgcttgcccat
aatggatgggtcatgggagatgacccacttagaaactttgcagagccagggtctaatgtt
tatttgagacgagagcttgtatgctggggtgacagcgtgaaacttcgctatggtgacaaa
ccggaggactgtccgtacttatgggctcacatgaagaagtacacggagatcacagccaag
catttctcaggcgtgcgtctggataactgccactccacaccccttcatgttgctgagtat
atgttggctgttgctcgccaacacaggcctgatctgtatgtggtggctgagctcttcact
ggcagcgaggagctggacaatatctttatgactaagcttggcattacctcccttatccga
gaggccatgagtgctggggacagtcatgaagaaggtcgactggtttatcgttttggaggg
gagcctgtaggttcattcgtacagccaagtctcaggcctttagtgccgacaatcgctcac
gccatgtttttggatgttacacatgacaatgaatgtcctattcaggctcgttcggtgtat
gatgctttacccagcactgctatagtctcaatggcctgctgtgcctcaggcagcactaga
ggatacgatgagctcgtacctcaccagatttcagtagtaaaggaagagcgtctgtacccc
aagtggaatcctgatgcactgccctcttctgtcggggaggtgaacctccagagtggtata
atggcgggaaaacttgccctcaacaaacttcatcaagagctggcagagaagggcttcacc
caggtttacgtagatcaactggatgaagacaccgtggctgtgaccaggcattgtcctagc
acacatcaatctgttgtgactgtctctcgtacggcctttaaaaacccagaaacacaccaa
tacagagagcatctggcccccatgtacatcccaggtaaaatcgaggaagtggttttagag
gcacgtacagtggagagaaacactgagtcatacgtgaaagatgagaggtttatcaacggc
atgccgaactacacggttgagatccgcgaacacatccagttaaaggacagtgaaatcgtg
aaacaaggagatgccaccacaaagggccgcagtgagtttgttgaggagattttgtttgaa
aagctcacacctggtagtgtaattgcattcagggtcagtctcgatccaaactctcagaaa
atggtcggctacctgcgaactcaactatcacaatttaaccgactgtataaatccggcagt
ctgactgacagcaatgtccctggcatcctgaaaatagctttagactttttaatgtccaaa
ctgactctggctgagatgaatgtgttgttgttccgctgtgatgcggaagaacaagaagat
ggtggcggctgctacaatataccgtcctggatgccactaaagtatggaggcctgcaaggt
ttcgtgtcagtgttgtctgagattcgacccaaaaatgaccttggacatccgttctgtgac
aatctcagacagggtgattggatgattgattacgtgagctctcgtctgattaataaaggt
ggcgctctaagggaggttggaaagtggttcagcgctgtatttacatacctcaaacatatt
ccacgctacttagtgccttgttattttgatgcgattattgtcggggcgtacgccacagct
gtagatgctgtttttaaccaaatgtccagctttgttcagaacgggtcgaccctggttaag
cagctggccctggggtcagttcagatgtgtggggtgggtcgcgttcctgccctgccgctt
ctttctcctgaactggaggatgtcccaatctggctcaacagtatgaccaaacaagaggag
caatgttgtgtttctcttgctgcaggtctgccgcatttctccactggaattttccgctgc
tgggggcgagacacttttatagcactccgtggcctcatgcttttgacagggaggtacctg
gaggccagaaatatcatcttggcctttgctggcacgatgcgccacggactgatccctaat
ctgttgggtcagggcgtcgcagctcgttataactgccgtgatgcagtatggtggtggctt
cagtgtattcaggactactgtaatatcgtgcccaatggcacagatattcttatgtgccct
gtgtcacgtatgtatcccactgatgattctgaagcacaggccctggggacagtgattcac
gaccagccattatatgtggttattcaagaggctatgcagcgtcatatgcagggaatagag
ttcagagagagaaacgcaggtccacagatcgaccacaacatgcgagatgaaggctttaac
gtggaagccaaagtaaatcccgagacgggatttgtttacggtggaaatcgcttcaactgt
gggacgtggatggataaaatgggagagagcgacaacgcccataatagaggttttccagct
acacccagggacggttctgcggtggagattgtgggtctctgtaagtcagcggtgcgctgg
ctgatgacgatgaatgacaatggaaaattcccatactcctctgtcacaatacacagagat
ggaacagaacagtcagtgtcctacaaagactggaatcaacggatccaggagaattttgaa
cgtttcttctacgtgtcagacgaccctgcagacccaaatgagcaacacccagacctggtc
cacaagaaatgcatttacaaagacagttacggagcctctagtccctggtgtgactaccag
ctcaggccaaacttcaccatcgccatggtggtggcaccagagttgtttacagtgcaaaga
gcatggaaggctttagagattgtagaaaagaagctgctcggccctctgggaatgaaaact
ctggatccagatgatctggtgtactgtggtgtttatgacaacgccctgaataatgacgac
tataactgtgcaaaaggattcaactatcaccaaggacctgaatggctgtggccagtcgga
tacttcctacgagccaagctttattttgctaagaaaatgggccaggagaagtacaacgaa
agtgtgtacctggtgaagaatgttctgtctagactttatacccatttagaaagatcacct
tggaagggtttacctgagctgactaatgaaaacggacagtactgcccattcagttgtgaa
acacaggcttggtctgttgccactgttctggaggccctatatgatttatga
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integrated database retrieval system
