Labeo rohita (rohu): 127156198
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Entry
127156198 CDS
T09007
Symbol
setd1a
Name
(RefSeq) histone-lysine N-methyltransferase SETD1A isoform X1
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00310
Lysine degradation
lroh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
127156198 (setd1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127156198 (setd1a)
Enzymes [BR:
lroh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
127156198 (setd1a)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
127156198 (setd1a)
HMT complexes
COMPASS/SET1 complex
127156198 (setd1a)
COMPASS/SET1 complex (yeast)
127156198 (setd1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N-SET
SET
RRM_1
Motif
Other DBs
NCBI-GeneID:
127156198
NCBI-ProteinID:
XP_050954898
LinkDB
All DBs
Position
3:complement(19010634..19039479)
Genome browser
AA seq
2254 aa
AA seq
DB search
MDPDSGADTQRTLSLQWKSYKLVQDPALRRVTQKIYRYDGIHFSVPDSGFPPVGDLRDPR
PRRIWSRHTELSLPVPKFKLDEYYVGPIPLKEVTFARLNDNIKEPFLAEMCAKFGEVEEM
EILFHPKTRKHLGLARVLFTSTRGAKDTVKHLHNTSVMGNIVHVQLDIKGQQRMKYYDLI
VSGSYTPQTVPTGGKALTEKFQPPAPTQPDTSSDIRRRLSTDQMAAPTAPLNSGSTTPCS
VDTGFGDQRLDTPPSSLGGPYTPGSSASSQGGGTPYTPRSGTPFSQDSGYSVGRHGGYSG
TQSFSQQDMLPSSSCSSSAVSSSSGFKPPRFHEDLHAPPPQEPGVFHRGRPGYPPTAPFR
PNEPPYPYPNVGGSGMHMPLHPPMPPPGPQFEPPPLSDRERERDRERGHRDRDRERDSGG
RYGGGISSRRSSYHYQQDTNSSSTSKSYHSHHSHHADRREDRDGRAYRRDSSGSRSGDHG
RHRNHHHSHNHHSGGGGGSSRRRSSRDREWERDREGDYNSSDPRYGGHSNSSHHSSNSLS
PPSATSSYGGYSSSKDLSPYDTPSSSRLEPSPAFRPQQGASERAFGMGGSMDNDYRAHSH
HTPLAPPPPPPPLPPASVIAAAVAETLGSLDFGQDSPIREEQWTKPKRYPSTPPHPPRTP
PTSSPPHASIPSSSTSPSSTSLPHHLPSSTASLSPPPPQRDSSPEPDSTNESLPFMHHSS
SLDSRIEMLLKEQKAKFSFLASDDEDDDKEEDRGRGKTGESADDGGNKLREENGERPGHK
RQGETEGGQQRRRGDKDGRRSRGKRQGGAVGEGRKTPPEVASSTPTTHSLVSESLQGQMP
PPQEEHTTSDSHRAPHTPPTYNGEAQPSPHSSGEDMEISDEDDNAITTATPHPAASSSSS
PATSSQSALPSQTPDPSASPAPDTNQHFNATMPPPPIPSYPPHLPPPPLPGFSLQPPPPP
GIPPPLPHMELHPEYPPPLPHHMYDYASSMELMSQYCGGAPMSFQMQTHMLSRLHQMRMA
SSNSSTAPPGEVPPASEYPPSFHLHSIPPPHAPPHHPHHPYMDQDGNVATHYDQDHRYIP
PHLPYAYPDPHAAQLPHHHAIPPPHSPWPPHLLPQQFPSHYPPPGFGTVSGVDGELYGAA
GDQMAIMGHNPYEAVVQQVLAALIEEMKNIMQRDLNRKMVENVAFGTFDEWWDRKEQKAK
PFQTAMRGVAVVREEEKKDEKTSNRPREPLMSLVDWAKSGGMEGFSLRGALRLPSFKVKR
KEPQELVEGGELKRARPSTPPDEEDEDSYQGKSVDTAAGRTEDRRVADRGAARRRRRAKA
RKPYDLDSEGEETSDGSSSEKEDEDSDKVDESEDEALSADSDDESISSSSSESSSSSSSA
SSSSSDEEDEEDGEQAAESESVDTMDESTMDSVAAIDAEKDERDKASLEQSPVTAAEVKQ
EEEKTPTAVPPSSPYPRPSSPILLLPPLKKRRKTVSFSMEESEAKPSVLSSSAPPPSPTP
VSQASDVPTSASPGSTPTAAVPAATSKPVPMLLPFASRPSENNAVTSPASPSAVLTVPPP
VRSLRPDEPKKSPGLPPSPQTPTAKTPSKRGKESPRTPPAPVCLTVQNLPLDHASLVKVA
YEDPVPIPTTQKGRARGRPRTLSQSASALHPALEEEDEDEEELEQRLKLREQLGVSSLLQ
LASAPKPDLSVLADVALKMDPEADIDSEETETSDEAEEHKLEEEEGDFFAPHPRQPLQDP
EGLFVLQEHNYSKTPAPPHLTSPQKRTKQDSTVLLPADLNQHGVQEAPEEVIGEALAARA
EAPELYGDLSGMLCDSRDTAETQTKTLGPAHKRRGSISKEMEVEERGKGKSKKRSRKDKE
NEELQITKKQKDKQIKKQRKRKLEELEEDVDVEQLESGELSSSSSDSGDSDFGLERSLEF
EKEEVRKSERLFLQEAGLTPSTQRRSKHVPTAAPLLRPSYKNRSEFEQMTILYDIWNTGL
DQEDMRLLKSTYEKLLQDDHGTDWLNDTHWVPHTITNIPNPRRKKKTPDGQLRQHVTGCA
RSEGYYAISRKEKDVYLELDQPVTVQEAGDYDTAGSNRLLSERRSEQRRLLSAIGTPAVM
DSDLLKLNQLKFRKKKLRFGRSRIHEWGLFAMEPIAADEMVIEYVGQSIRQMVADNREKR
YAQEGIGSSYLFRVDHDTIIDATKCGNLARFINHCCTPNCYAKVITIESQKKIVIYSKQP
IGVNEEITYDYKFPIEENKIPCLCGTENCRGTLN
NT seq
6765 nt
NT seq
+upstream
nt +downstream
nt
atggatccggacagtggggcggacactcagcgaactctcagtctgcaatggaagagctat
aagctagtacaagaccctgctctccgacgggttactcagaaaatctacagatatgatggg
attcactttagtgtaccggattcaggattcccgcccgtgggggacttgcgtgatccgaga
ccccgcagaatctggtctagacacacagagctgtcgctgccagtgcccaaatttaagttg
gatgagtattacgtaggtcctataccacttaaggaagtgacgtttgcgaggttgaatgat
aatatcaaagagccgttcctggctgagatgtgcgccaagtttggtgaggttgaagaaatg
gagattctgtttcatcccaagactcgcaagcacttgggcttggcccgcgtcctcttcacc
agcactagaggggccaaagacaccgtcaaacacctgcacaatacttctgtcatgggaaac
atcgtccatgtccagttagatatcaaaggccaacagaggatgaagtactatgacttaata
gtgagtggctcatacactcctcagacagtgccgaccgggggcaaagctctcaccgagaaa
tttcagcccccagccccgactcagccagatacgtcgtctgatatccggcggaggctctcc
acagaccagatggcagctcccactgcgcctctaaactctggcagcaccaccccctgttct
gtggacactggatttggagaccagcgcctagacacccctccatcctcactggggggaccc
tatacgccgggttcgtctgcttcttcacagggtggcggaaccccttacacgcctcgctct
ggaacccctttctcccaggactcgggatactctgtgggcaggcacggtggttatagcggc
actcagagtttttcccagcaggatatgcttccatcttcctcctgctcctcttcagcagtc
tcctcatcatcgggattcaagccccctcgctttcatgaggacttgcatgctccacctccg
caagaacctggcgtgttccacagaggtcggccgggatatcctccaacagcgcctttcagg
cctaacgaacctccttatccgtatcccaatgttggaggttcagggatgcacatgccactg
catccacccatgccgcctccagggcctcagtttgagccacctccgctgtctgacagagag
agagaacgagatagagaaaggggacacagggatagggaccgggagagagactcaggaggc
cgttatggaggcgggataagctcccgacgttcctcttaccactatcaacaggatacaaac
tcctcatccacctccaaatcctaccattcacatcactcgcatcatgctgatcggcgagag
gacagggacggcagggcttatcggcgcgacagctcgggatcccgctcgggagatcacgga
aggcatcggaaccaccatcactcccataaccaccacagcggcggtggaggtggatcaagc
cggcggaggagcagcagagaccgggaatgggagcgagaccgagaaggagactataacagc
tctgatccacgttacggaggtcactcgaactccagccaccactcgtccaacagcctctcc
cctccctctgccacctcctcttatggaggatactcgtcatctaaagacctgtccccctac
gacacaccttcttcctcccgcctagagccctcgccggctttccgtcctcagcagggtgcg
agcgagagggcttttgggatgggaggaagcatggacaatgactaccgtgctcattctcac
cacactccccttgcgccgccccctcctcctcctcccctccccccggcctccgtcatcgca
gccgctgtggctgaaacgctcggctctcttgattttggtcaggacagtcccatccgagaa
gaacagtggaccaaacccaaacgctatcccagcaccccgccccatccacctcggacacct
ccgacctcttcgcctcctcacgcctccatcccgtcatcctccacctccccgtcctcgacc
tccctgcctcaccacctcccctcttcgacagcatccctctctccgcctcctccgcagcgt
gactcctccccggagcctgactccaccaatgagagcctgccgttcatgcaccacagcagc
agcttggactcacgtattgagatgttgctgaaggaacaaaaagcaaagttttctttcctt
gcctcagatgatgaggacgatgacaaggaggaggacagagggagaggaaaaacaggcgag
agtgcagatgatgggggaaacaaactcagagaggagaatggtgaaaggcctggtcacaag
agacaaggagagacggagggaggccagcagaggagaagaggagacaaagatggacgccgc
agcaggggcaaaagacaaggtggtgcagtgggtgaaggcaggaaaacacctccagaggtg
gcctcttccacacccaccacgcacagtttagtgtcagagtctcttcagggccaaatgccg
ccgcctcaggaggagcacacgacctctgactcacacagggctccacacaccccacccacc
tacaatggagaggcacagccttctcctcactcctctggggaggatatggaaatatccgat
gaggatgacaacgccatcaccacagcgacaccccatcccgcagcctcttcgtcctcttca
ccggccacctcctcgcaatctgccctcccctcgcaaaccccagacccctctgcgagtccc
gccccggacaccaaccagcacttcaatgctaccatgccacccccgcccattccctcttac
cctccccacctccctcccccacctctgcccggcttctccctgcagcctccgccaccccct
ggcataccacctccgcttcctcacatggagctgcacccagagtaccctcctccgctgccg
catcacatgtacgactacgccagctccatggagctcatgagccagtactgcggaggagca
cccatgtcattccagatgcagacacacatgctcagtcgtctccaccagatgcgaatggcc
tcctccaacagctctacagcaccccctggagaagtcccacctgcctctgaatatcccccg
tcatttcacctccattcaataccccctccgcatgcaccgccacaccacccgcaccaccca
tacatggaccaagatgggaatgttgccactcactatgaccaggaccaccgctacatccct
cctcacttaccgtacgcctacccggaccctcacgccgcacagcttccgcaccatcacgcc
attcctcctccccacagcccctggcctcctcacctgctaccccagcagtttccatcccac
tatcctccacctggcttcggcacagtgtctggcgtagatggagagctgtacggagcggca
ggtgaccagatggccataatgggccacaatccctatgaggccgtagtgcagcaggtactg
gcagctttgatcgaggagatgaaaaacatcatgcagagggacctgaaccgcaagatggtg
gagaatgtcgccttcggcacgttcgacgagtggtgggaccgcaaggaacagaaagctaag
ccattccagacagccatgcggggagttgcagtggtgcgcgaggaggaaaagaaggacgag
aagaccagcaaccgacctcgggagccactcatgtctctggtagactgggccaagagtgga
ggcatggagggtttctccctgcggggggccttgcgtttgccttcgtttaaggtgaaaagg
aaggagcctcaggagcttgtcgagggtggtgagctgaagagagccagaccttccactcca
cccgatgaggaagatgaggactcgtatcaggggaaatctgtcgacactgctgctggaaga
acagaggatcgacgcgtggcagacagaggagcagccaggagaagaagaagagccaaggca
cgtaaaccatacgacctcgacagcgagggagaagaaacatcagatggttcctcctcggaa
aaggaggatgaagacagcgacaaagtcgatgagtcagaagatgaagcccttagcgcagac
agtgatgacgaaagcatttcttcctcttcttctgagagctcatcatcatcgtcctcagca
tcgtcctcttcctccgatgaggaagatgaagaggatggtgaacaggccgctgagagtgag
tcagtggacacaatggatgagtctacgatggacagtgtggcggctatagacgccgaaaag
gatgaaagggacaaagcaagccttgaacaatcaccagtgactgctgcagaggtcaaacaa
gaagaagagaaaacgcctacagctgtgcctccatcttctccgtatccccgtccttcttca
cccattctcctccttcccccactcaagaagcggcgcaagactgtttctttctcgatggaa
gagagcgaggccaagccctccgttctgtcatcttctgctccccctccatcacccactcct
gtctcgcaagcctcagatgttcctacttccgcttctcctggaagcacgcccacagcagct
gttccagctgccacctctaagcccgtcccgatgctccttccgtttgcgtctcgtcccagc
gagaataacgctgttacttcccctgcttccccttcggctgttctcaccgtccctccaccg
gtgcgttccctgcggcctgatgagcccaaaaagagtccgggtctccctccatccccacaa
actcccactgccaaaaccccctccaaacgtggcaaagagtctcccagaacacccccggca
cccgtctgcctcaccgtccagaaccttccgctggaccacgcctccttggtcaaagtggcc
tacgaggaccccgtccctattccgaccacgcagaagggccgtgcacgcggtcgccctcga
accctcagccagtcggcttccgccctgcatcccgctctggaggaagaggacgaggatgaa
gaggagctggagcagcggctgaaactcagggagcagctgggagtttccagcctgctgcag
ctggcctctgcccccaagcctgacctctctgtgctggccgacgtggcgctgaagatggac
ccggaggcagatatcgactctgaagaaactgagacctcagatgaggcagaggagcacaag
ctggaggaagaagagggagacttcttcgctccgcacccacgccaaccactccaggatcca
gagggtctgtttgtcctgcaggaacacaactattctaaaactcctgctcctccacacctc
acatctcctcaaaagaggacgaaacaagactccactgtcctgcttcctgcagacctcaac
caacacggtgttcaggaagcccctgaagaggtcatcggggaagctctagccgcaagagca
gaggctccagagctgtacggggacctttctgggatgctgtgtgactccagggacacggct
gagacgcagaccaagaccctcggcccagcgcacaagaggagaggatcgattagcaaagag
atggaagtggaagagagggggaaagggaagagcaagaagagaagcaggaaagacaaagaa
aatgaggaactgcagattactaagaaacagaaggataaacagatcaagaaacagaggaaa
cgaaagttagaggaactggaagaagatgtggatgtggaacaattggagtctggtgagctt
tccagctccagttctgactcaggagattctgacttcggtctggagaggtcgctggagttt
gaaaaggaagaagtcagaaagagcgaacgacttttcttgcaggaagctggcttgaccccc
tccactcagcggcggtccaaacacgtgcccacggcagctcccttactacggccctcttac
aagaaccgcagcgagtttgagcagatgaccatcctgtatgacatctggaacaccggcctg
gaccaggaagacatgagactcctaaagagcacctacgagaaactgctgcaagatgatcat
ggcaccgactggctcaacgacacacactgggtccctcataccatcaccaacatccccaac
ccccggcggaagaagaagacaccagatgggcagctaagacagcacgtcacgggctgtgct
cgtagtgaaggctactatgccatcagccgtaaggagaaagacgtctatcttgagcttgac
cagccggtgactgtgcaggaagctggagactatgacactgcaggctcgaatcgcctgctt
tcggaaaggcgctccgagcagcggcgtctcctcagtgctatcggcactccagcagtgatg
gactctgacctgttgaaactgaaccagctcaagttccgtaagaagaagctgaggtttggc
cgcagtcgtatccacgaatggggtctgtttgccatggaacccattgctgcagatgaaatg
gtcattgaatatgtgggacagagtatcagacagatggttgccgataaccgggagaagcga
tatgcccaagaaggcatcgggagcagctatctattccgtgtcgatcatgacactatcatt
gacgccaccaagtgtggcaacttggctcgatttattaaccactgctgcacgccgaactgc
tacgccaaagtgatcaccatcgagtcccagaagaagatagtcatttactccaagcagcct
atcggtgtgaacgaggagatcacgtacgattacaagttccccatcgaagagaacaaaatc
ccatgtctgtgtggcacggagaactgcagaggaaccctcaactaa
DBGET
integrated database retrieval system
