Labeo rohita (rohu): 127156310
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Entry
127156310 CDS
T09007
Symbol
spam1
Name
(RefSeq) hyaluronidase PH-20
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00531
Glycosaminoglycan degradation
lroh01100
Metabolic pathways
lroh04142
Lysosome
Module
lroh_M00076
Dermatan sulfate degradation
lroh_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
127156310 (spam1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
127156310 (spam1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
lroh02042
]
127156310 (spam1)
00536 Glycosaminoglycan binding proteins [BR:
lroh00536
]
127156310 (spam1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lroh00537
]
127156310 (spam1)
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
127156310 (spam1)
Bacterial toxins [BR:
lroh02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
127156310 (spam1)
Glycosaminoglycan binding proteins [BR:
lroh00536
]
Heparan sulfate / Heparin
Enzymes
127156310 (spam1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lroh00537
]
Enzymes
127156310 (spam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
YecR
Motif
Other DBs
NCBI-GeneID:
127156310
NCBI-ProteinID:
XP_050955029
LinkDB
All DBs
Position
25:complement(10777871..10782505)
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AA seq
439 aa
AA seq
DB search
MGDQRKHRLPFYTFLFITFGHLITSLSPPPTLAPLFHRPFVLLWNAPISKCQQLKVPLDL
SLFQAVTTPARERNQSLTLFYKNRIGLYPYVDLQSLKEYNGGIPQRGNLSASLGKAKEEF
TQYIPDSTSGLAVMDWEEWLPMFDRNLDDKEIYKELSINYTLTQNSSLDMQQARSDAKRQ
FQNEARCFMEKTLKMGIDLRPLQLWGYYLFPDCYNYDFEESNYTGTCSEQTKQLNNELLW
LWEASTALYPSAYLPVSVSGSKSAALFVRHQVHEATRVAALPKQRTTAPVYVYLRPLLRD
QKELYMNEIDLVSSIGESAALGASGAVLWGASADYKDKKSCEALSAYLTDTLNPYIINIT
SAAQLCSKSLCRSNGRCVRKNYNSDDYLHISSESHQISRKDGKYVVTGTPSQSDLTYWEK
KFTCQCYEDRKCTATIPSV
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgggagaccaaaggaaacatcggctaccattttacacctttcttttcattacattcggg
catcttatcacatcactgtctcctccaccaacattagctcctctattccataggcctttt
gtcctgttatggaatgctcccatttctaaatgccaacagctgaaggtccctctagattta
tcgctgtttcaggcggtcaccacacctgccagggaacgcaatcaatcccttaccctgttc
tacaaaaatcgaattgggctttacccctatgtagacctccagtccttgaaagagtataac
ggtggcatcccgcagaggggcaacctgtctgctagtttagggaaagctaaggaagagttt
acccaatacattcctgactcaaccagtggacttgctgtgatggattgggaagaatggctt
ccaatgttcgaccggaatttggacgacaaggagatatacaaggaactgtcaatcaactac
accctcacacagaattcttccctagatatgcaacaagcaagaagcgatgccaaacgacaa
ttccagaatgaagccagatgtttcatggaaaaaactttgaaaatggggatcgatcttcga
cctctgcaactatggggctactacttgttcccagactgctataactatgactttgaggag
tcaaactatacaggaacttgctcagagcaaacaaaacagttgaacaacgagctgctctgg
ctgtgggaggccagcactgccctttacccatcagcatacctgccggtttctgtaagtgga
agcaagagcgctgcactgtttgttcgtcaccaggtacatgaggcaacaagagtagcagcc
ctgccaaaacaacgcactactgcaccggtctacgtctacctacggcctctcttaagagac
caaaaggagctttacatgaatgagattgatttggtaagcagtatcggtgagagtgcagcc
ctgggagcttctggtgctgtgttatggggggctagtgctgattacaaagacaagaaatca
tgtgaagccttgtctgcatacctgactgatactttaaacccctacattatcaatatcacc
tctgcagcccagctctgcagcaaaagtctctgtcgaagcaatggacgttgtgtccgcaaa
aactacaactcagacgattatctccacattagttcagaaagccaccaaatcagtaggaaa
gatgggaaatatgtggtcactgggaccccttctcaaagtgatctcacttactgggaaaaa
aaatttacttgtcagtgctacgaagacaggaagtgcacagctacgataccctctgtctaa
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