Labeo rohita (rohu): 127163219
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Entry
127163219 CDS
T09007
Symbol
ptger1c
Name
(RefSeq) LOW QUALITY PROTEIN: prostaglandin E receptor 1c (subtype EP1)
KO
K04258
prostaglandin E receptor 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04020
Calcium signaling pathway
lroh04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
127163219 (ptger1c)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127163219 (ptger1c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lroh04030
]
127163219 (ptger1c)
G protein-coupled receptors [BR:
lroh04030
]
Rhodopsin family
Lipid
Prostaglandin
127163219 (ptger1c)
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
DUF5422
DUF5403
Motif
Other DBs
NCBI-GeneID:
127163219
NCBI-ProteinID:
XP_050962293
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Position
3:6538369..6542694
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AA seq
379 aa
AA seq
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MDILFTASFPVSCQNSSDYNLTTLCPDNQTTNSTPPSLANPPAFGMSYFTMTLGAISNLT
ALAILAHSYARFRRWAKVPFLLLASVLILSDLAGHVITGALALHLHLGRLKHHGAAVAVE
PPQVYCKLFGGCMVFFGLSPLFLGSAMAVERCIGITQPLLHPAVVTMTRVRLTVLLITFS
ALTLAGLPLLNVGNYKPQFPGTWCFLPVNGPLSIADASLAXVFSTLGLVALTVSVVSNTI
SGLKLLQARFKDRCVKSSTARRHASLSPSSLHSLDVEMMTQLATITVVSCVCWSPFLIYI
LISVSRFYEGIRRPRRQCEKLLLLALRLASWNQILDPWVYILLRRAVLRRILQLLQPDRV
LFTQSSSYRDSHRKQISLH
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggatatcctgttcaccgcttcctttcctgtttcatgtcagaactctagtgactataat
ctcacaactctctgtcctgataaccaaaccacaaactcaacgcctccatctctggctaac
cctccagcgtttgggatgtcctacttcaccatgaccctgggcgcaatctcaaatctaact
gcactggcgatcctcgcccattcctacgcccgcttccgccgatgggccaaagtgcctttt
ctactactagcttcagtcctgattctgagcgacctggcaggtcacgtgatcacgggggct
ttggcacttcacctccatcttgggagactgaaacatcacggggcggcagtagcagtggag
cctccacaggtttactgcaaattatttggtggctgcatggtgttttttggcctttcccct
ctgtttttaggcagtgcgatggcagtggagcgctgcataggcattacccaacctcttctg
cacccggcggtggtcaccatgacacgtgtccgcctcaccgtgctgctgatcaccttctca
gctctcactttggcaggactccctctgctaaacgtgggcaactacaaaccacagttcccc
ggaacctggtgtttcttacctgtgaacgggccgctctccatcgcagatgccagccttgct
nttgttttttccacgctggggcttgtagcattaactgtctcagttgtgtctaacactata
agcgggctgaagttgctccaggcaaggtttaaggaccgctgtgttaagtcaagcactgct
cggagacatgcatccctctcaccttcgtcgcttcactccttggatgtggagatgatgaca
cagctggccacgataacagtggtctcctgtgtctgctggagtccttttcttatttacatc
ctcatatccgttagcaggttttatgaaggaatcagaaggccgcggcgtcagtgtgagaag
ctgcttctgttagctctgcgcttagctagctggaaccagattttggatccgtgggtttac
atcctcctacggcgagcggttctgcgcagaattcttcagctgctgcagccggacagagtc
ctgtttacacagagcagctcctacagagactcgcacagaaagcaaattagtttacactga
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