Labeo rohita (rohu): 127165340
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Entry
127165340 CDS
T09007
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03022
Basal transcription factors
lroh03420
Nucleotide excision repair
lroh04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127165340 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
127165340 (cdk7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
127165340 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lroh01001
]
127165340 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lroh03021
]
127165340 (cdk7)
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127165340 (cdk7)
03400 DNA repair and recombination proteins [BR:
lroh03400
]
127165340 (cdk7)
Enzymes [BR:
lroh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
127165340 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
127165340 (cdk7)
Protein kinases [BR:
lroh01001
]
Serine/threonine kinases: CMGC group
CDK family
127165340 (cdk7)
Transcription machinery [BR:
lroh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
127165340 (cdk7)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
127165340 (cdk7)
DNA repair and recombination proteins [BR:
lroh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
127165340 (cdk7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Seadorna_VP7
ABC1
Kinase-like
Haspin_kinase
RIO1
APH
Motif
Other DBs
NCBI-GeneID:
127165340
NCBI-ProteinID:
XP_050965792
LinkDB
All DBs
Position
5:15296725..15301031
Genome browser
AA seq
345 aa
AA seq
DB search
MALDVKSRSKRYEKLDFLGEGQFATVYKARDKTTNTIVAIKKIKVGHRTEAKDGINRTAL
REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDTSLVLTPANIKAYILM
TLQGLEYMHNHWILHRDLKPNNLLLDENGVLKLADFGLAKAFGSPNRVYTHQVVTRWYRA
PELLFGARMYGVGVDMWAVGCILAELLLRVPFLAGDSDLDQLTKIFEALGTPTEETWPGM
SSLPDYVSFKLFPGTPLEHIFSAAGDDLLELLKGLFTFNPSTRTTASQALKMRYFSNRPG
PTPGPQLPRPNSSTEALKEKENLLIGIKRKRDSIEQGTLKKKLVF
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcattagatgtgaagtcccgatcgaaacgatatgaaaagttggactttctgggtgaa
ggacagtttgccactgtgtacaaggcaagagacaaaaccacaaacactattgttgctatc
aaaaagataaaagtgggtcacagaacagaagccaaagatggcatcaacagaacagctctt
cgagagattaagttgttgcaagagcttagtcacccaaacattattggtctcctggatgct
tttggacacaaatccaacatcagtcttgtctttgacttcatggagacggatcttgaggtg
atcattaaggacaccagtcttgtgttgacgccagccaatataaaggcgtacatcctaatg
acgttacagggtctggaatacatgcacaatcactggatcctgcacagggatctgaaaccc
aataatttgctattggatgaaaatggagtcctgaagctggctgattttggcttagccaaa
gcatttggaagcccaaaccgagtgtatacacatcaagttgttacaagatggtatcgtgca
ccggagctgctcttcggtgccaggatgtacggtgtgggtgtggacatgtgggcagttggc
tgcattcttgctgagcttttactccgagtgccatttttagctggagattcagacttggac
cagctgacaaagatatttgaagctttgggaacaccaacagaggagacatggcctggaatg
tccagtcttccggactatgtgtcatttaaactatttcctggcactccattggagcacatc
ttcagcgcagctggcgatgaccttctggagctcctgaagggattattcacctttaacccc
tccacgcgcactacagcttcacaggctttgaagatgaggtatttcagcaatagaccagga
ccaaccccaggaccacagcttcccagaccaaactcctcaacagaagccctgaaagagaaa
gaaaacctgttgattggaatcaagagaaagcgtgacagtattgaacagggtacccttaaa
aagaaactggtgttctga
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