Labeo rohita (rohu): 127166295
Help
Entry
127166295 CDS
T09007
Symbol
cxcr4a
Name
(RefSeq) C-X-C chemokine receptor type 4a
KO
K04189
C-X-C chemokine receptor type 4
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03250
Viral life cycle - HIV-1
lroh03260
Virion - Human immunodeficiency virus
lroh04020
Calcium signaling pathway
lroh04060
Cytokine-cytokine receptor interaction
lroh04144
Endocytosis
lroh04672
Intestinal immune network for IgA production
lroh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
127166295 (cxcr4a)
03260 Virion - Human immunodeficiency virus
127166295 (cxcr4a)
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
127166295 (cxcr4a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
127166295 (cxcr4a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127166295 (cxcr4a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
127166295 (cxcr4a)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
127166295 (cxcr4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lroh04030
]
127166295 (cxcr4a)
04050 Cytokine receptors [BR:
lroh04050
]
127166295 (cxcr4a)
04090 CD molecules [BR:
lroh04090
]
127166295 (cxcr4a)
G protein-coupled receptors [BR:
lroh04030
]
Rhodopsin family
Chemokine
CXC Chemokine
127166295 (cxcr4a)
Cytokine receptors [BR:
lroh04050
]
Chemokine receptors
CXC Chemokine
127166295 (cxcr4a)
CD molecules [BR:
lroh04090
]
Proteins
127166295 (cxcr4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
Anoctamin
Motif
Other DBs
NCBI-GeneID:
127166295
NCBI-ProteinID:
XP_050967407
LinkDB
All DBs
Position
6:9247364..9249050
Genome browser
AA seq
360 aa
AA seq
DB search
MAYYEHIVFEDDLLNENSSEFGSGDIGANFEVPCDVEVSHDFQRIFLPTVYGIIFVLGLV
GNGLVVLVMGCQNKSRTMTDKYRLHLSVADLLFVLTLPFWAVDAAKDWYFGGFMCVAVHM
IYTVNLYSSVLILAFISLDRYLAVVRATSSQGARKLLANRIIYVGVWLPAALLTVPDLVF
AKAESSSIRTFCERIYPQDSFTIWVVVFRFQHILVGFVLPGLVILICYCIIISKLSRGSK
GTQKRKALKTTVVLIVCFFVCWLPYCGGILLDTLMTLEVIPHSCELEQGLQKWIFVTEAL
AYFHCCLNPILYAFLGVKFKKSARSALSPSRGSSLKILSKKRGGMSSVSTESESSSFHSS
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggcatattacgaacacatcgtctttgaagatgatttattaaatgagaacagctctgag
ttcggctcgggggacattggagccaactttgaggttccgtgcgatgtggaggtcagtcat
gacttccaaaggatctttcttccaaccgtgtacggaatcatatttgttttgggtcttgtc
gggaacggactggttgttctagtaatgggctgccagaacaaatccagaaccatgacggac
aagtaccgcctgcacctttcagtggcggaccttctgtttgtgctcaccctgccgttctgg
gccgtggacgcggccaaagactggtacttcggagggttcatgtgcgtggccgtgcatatg
atttacacggtgaatttatacagcagcgtcctcatcctcgccttcatcagcctggaccgc
tacctcgccgtggttcgcgccacgagcagccaaggtgcaaggaagctcctagccaatcgc
atcatttacgtgggcgtgtggctccccgccgcgctcctcaccgttcccgacctggtgttc
gccaaagcggagagcagctctatccgcaccttctgcgagcgcatttacccacaggactct
ttcacaatctgggtggtcgttttccgcttccagcacatcctggtgggcttcgtgctaccc
gggctcgtgattctaatctgctactgcatcatcatctccaagctgtcgcgcggttccaag
ggcacgcagaagcgcaaggcgctcaagaccaccgtggttctgatcgtatgctttttcgtc
tgctggttgccctattgcggagggatcctgctggacacgctgatgacgctggaggtgatt
cctcacagctgcgaacttgagcaggggctgcagaagtggatcttcgtgacggaggctctg
gcgtacttccactgctgcctcaaccccatcctatacgcgtttcttggggtgaagttcaag
aagtccgcccgcagcgctctatctcccagccgggggtccagtctgaaaattctatcaaag
aagagaggaggaatgtcatctgtatccacagaatccgaatcgtccagctttcactctagt
taa
DBGET
integrated database retrieval system
