Labeo rohita (rohu): 127166998
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Entry
127166998 CDS
T09007
Symbol
gad1b
Name
(RefSeq) glutamate decarboxylase 1b isoform X1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00250
Alanine, aspartate and glutamate metabolism
lroh00410
beta-Alanine metabolism
lroh00430
Taurine and hypotaurine metabolism
lroh00650
Butanoate metabolism
lroh01100
Metabolic pathways
Module
lroh_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
127166998 (gad1b)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
127166998 (gad1b)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
127166998 (gad1b)
00430 Taurine and hypotaurine metabolism
127166998 (gad1b)
Enzymes [BR:
lroh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
127166998 (gad1b)
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
SepSecS
Chlam_OMP3
Motif
Other DBs
NCBI-GeneID:
127166998
NCBI-ProteinID:
XP_050968714
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All DBs
Position
6:3465877..3491088
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AA seq
587 aa
AA seq
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MASSAPSSSAADMDPNTANLRQPATTCDAWYGVAHGCTRKLGMKICGFLQKNNSLDEKNR
MVGAFKESAKNQMSCDNSERFTRAETDFSNQFARDLLPAKNGEEPTIQFLLEVVEILTNY
VRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDQPESLEQILVDCRDTLKYGVRTGHPRF
FNQLSSGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQLTLKKMREIIGWPNGDGDGL
FSPGGAISNMYSVMVARYKYFPEVKTKGMSAAPRLVLFTSEHSHYSIKKAGAVLGFGKEN
VILLKTDERGRVIPADLEAKIIDAKQKGYVPLFVNATAGTTVYGAFDPINDIADICEKYN
LWLHVDGAWGGGLLMSRKHRHKLSGIERANSVTWNPHKMMGVPLQCSAILVREKGILQGC
NSMCAGYLFQPDKQYDVTYDTGDKAIQCGRHVDIFKFWLMWKAKGTIGFEQHIDRCLELS
EYLYNKIKNREGYEMVFEGQPQHTNVCFWYIPPSMRGMPDGDERREKLHRVAPKIKAMMM
ECGTTMVGYQPQGDKVNFFRMVVSNHAVTKSDIDFLVDEIERLGHDL
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttctgcaccttcttcctcggctgctgatatggacccaaacacggctaattta
cgacaacctgccacaacctgcgacgcgtggtacggggttgcacacggatgtacgaggaaa
ctgggcatgaagatctgtggtttcctgcagaagaacaacagtttggatgaaaagaatcgg
atggtgggcgccttcaaggagagcgcgaagaaccagatgtcgtgtgacaacagcgagcgc
ttcacgcgtgcagagacagacttctccaaccagttcgctcgagatctactgcctgcaaaa
aatggcgaggagcccacaatccagtttcttcttgaggtggtggaaatcctcaccaattat
gtgcgcaagaccttcgacagatccaccaaagtgctagacttccatcaccctcaccagctc
ctagaggggatggagggcttcaacctggagctttctgaccaaccagagtcgctggagcag
atcctggtggactgcagagatacgctcaagtatggagtcagaacaggtcatcctagattc
ttcaatcagctttcgtctggtctggacatcatcggcctggctggagaatggctcacctct
actgccaacaccaacatgttcacatatgaaatcgctcctgtgtttgttctgatggagcag
ctgacccttaagaaaatgagagagatcattggctggcctaatggagatggcgatggactc
ttctcaccaggtggtgccatatcaaacatgtacagtgtgatggttgctcggtataagtat
ttcccagaagtcaaaaccaaaggcatgtctgcagcaccacgactcgtgcttttcacatct
gaacatagtcattattcaatcaaaaaggcaggagcagtactgggatttggcaaagaaaat
gtcattcttctgaagacagatgagagggggcgtgttatacctgctgacttagaggccaag
atcattgacgccaaacagaagggttacgttccactgtttgtgaacgcgacggctggtacc
acagtatatggagcattcgatcccatcaatgacattgcagacatctgcgagaagtacaac
ctgtggttacatgtggatggtgcatggggcggaggactgctgatgtccaggaaacacaga
cacaagctaagcggcattgagagagcaaactcagtcacgtggaatcctcataagatgatg
ggtgtaccattgcaatgttcagctatcctggttagagaaaagggcattctgcaaggctgc
aactccatgtgcgctggatacctcttccaaccagacaaacagtacgatgtgacctacgac
accggcgacaaggccatccagtgtggcagacatgtagacatcttcaaattttggctcatg
tggaaggccaagggcacaattgggtttgagcagcacattgacagatgtctggagctttct
gaatatctctacaataaaatcaagaaccgtgagggatatgaaatggtctttgagggccag
ccccagcacacaaatgtttgcttctggtatattccgccaagcatgcgtggcatgccagat
ggagacgaacgaagggagaaactacacagggtggcgccgaagatcaaagcaatgatgatg
gagtgcggcacaaccatggtaggataccaaccgcagggagacaaggtcaacttcttccga
atggtcgtctccaatcacgccgtcaccaagtctgacatcgacttcctcgtcgatgagatc
gagaggctgggtcacgacctgtga
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